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Volumn 33, Issue 50, 2013, Pages 19704-19714

DNA methylation and methyl-binding proteins control differential gene expression in distinct cortical areas of macaque monkey

Author keywords

[No Author keywords available]

Indexed keywords

ENHANCED GREEN FLUORESCENT PROTEIN; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; MESSENGER RNA; METHYL CPG BINDING PROTEIN; METHYL CPG BINDING PROTEIN 2; RETINOL BINDING PROTEIN 4;

EID: 84889819965     PISSN: 02706474     EISSN: 15292401     Source Type: Journal    
DOI: 10.1523/JNEUROSCI.2355-13.2013     Document Type: Article
Times cited : (13)

References (45)
  • 2
    • 0032830639 scopus 로고    scopus 로고
    • Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2
    • CrossRef Medline
    • Amir RE, Van den Veyver IB, Wan M, Tran CQ, Francke U, Zoghbi HY (1999) Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2. Nat Genet 23:185-188. CrossRef Medline
    • (1999) Nat Genet , vol.23 , pp. 185-188
    • Amir, R.E.1    Van den Veyver, I.B.2    Wan, M.3    Tran, C.Q.4    Francke, U.5    Zoghbi, H.Y.6
  • 3
    • 0035169663 scopus 로고    scopus 로고
    • Methyl-CpG-binding proteins. Targeting specific gene repression
    • CrossRef Medline
    • Ballestar E, Wolffe AP (2001) Methyl-CpG-binding proteins. Targeting specific gene repression. Eur J Biochem 268:1-6. CrossRef Medline
    • (2001) Eur J Biochem , vol.268 , pp. 1-6
    • Ballestar, E.1    Wolffe, A.P.2
  • 6
    • 14644437682 scopus 로고    scopus 로고
    • Imaging the developing brain: What have we learned about cognitive development?
    • CrossRef Medline
    • Casey BJ, Tottenham N, Liston C, Durston S (2005) Imaging the developing brain: what have we learned about cognitive development? Trends Cogn Sci 9:104-110. CrossRef Medline
    • (2005) Trends Cogn Sci , vol.9 , pp. 104-110
    • Casey, B.J.1    Tottenham, N.2    Liston, C.3    Durston, S.4
  • 7
    • 45849105557 scopus 로고    scopus 로고
    • MeCP2, a key contributor to neurological disease, activates and represses transcription
    • CrossRef Medline
    • Chahrour M, Jung SY, Shaw C, Zhou X, Wong ST, Qin J, Zoghbi HY (2008) MeCP2, a key contributor to neurological disease, activates and represses transcription. Science 320:1224-1229. CrossRef Medline
    • (2008) Science , vol.320 , pp. 1224-1229
    • Chahrour, M.1    Jung, S.Y.2    Shaw, C.3    Zhou, X.4    Wong, S.T.5    Qin, J.6    Zoghbi, H.Y.7
  • 9
    • 0033532960 scopus 로고    scopus 로고
    • Cortical integration in the visual system of the macaque monkey: Large-scale morphological differences in the pyramidal neurons in the occipital, parietal and temporal lobes
    • CrossRef Medline
    • Elston GN, Tweedale R, Rosa MG (1999) Cortical integration in the visual system of the macaque monkey: large-scale morphological differences in the pyramidal neurons in the occipital, parietal and temporal lobes. Proc Biol Sci 266:1367-1374. CrossRef Medline
    • (1999) Proc Biol Sci , vol.266 , pp. 1367-1374
    • Elston, G.N.1    Tweedale, R.2    Rosa, M.G.3
  • 10
    • 63849202954 scopus 로고    scopus 로고
    • Spinogenesis and pruning scales across functional hierarchies
    • CrossRef Medline
    • Elston GN, Oga T, Fujita I (2009) Spinogenesis and pruning scales across functional hierarchies. J Neurosci 29:3271-3275. CrossRef Medline
    • (2009) J Neurosci , vol.29 , pp. 3271-3275
    • Elston, G.N.1    Oga, T.2    Fujita, I.3
  • 11
    • 0025718412 scopus 로고
    • Distributed hierarchical processing in the primate cerebral cortex
    • CrossRef Medline
    • Felleman DJ, Van Essen DC (1991) Distributed hierarchical processing in the primate cerebral cortex. Cereb Cortex 1:1-47. CrossRef Medline
    • (1991) Cereb Cortex , vol.1 , pp. 1-47
    • Felleman, D.J.1    Van Essen, D.C.2
  • 12
    • 79955538247 scopus 로고    scopus 로고
    • Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain
    • CrossRef Medline
    • Guo JU, Su Y, Zhong C, Ming GL, Song H (2011a) Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain. Cell 145:423-434. CrossRef Medline
    • (2011) Cell , vol.145 , pp. 423-434
    • Guo, J.U.1    Su, Y.2    Zhong, C.3    Ming, G.L.4    Song, H.5
  • 14
    • 47949112579 scopus 로고    scopus 로고
    • MBD4-mediated glycosylase activity on a chromatin template is enhanced by acetylation
    • CrossRef Medline
    • Ishibashi T, So K, Cupples CG, Ausió J (2008) MBD4-mediated glycosylase activity on a chromatin template is enhanced by acetylation. Mol Cell Biol 28:4734-4744. CrossRef Medline
    • (2008) Mol Cell Biol , vol.28 , pp. 4734-4744
    • Ishibashi, T.1    So, K.2    Cupples, C.G.3    Ausió, J.4
  • 15
    • 17844396189 scopus 로고    scopus 로고
    • From mice to men: The evolution of the large, complex human brain
    • CrossRef Medline
    • Kaas JH (2005) From mice to men: the evolution of the large, complex human brain. J Biosci 30:155-165. CrossRef Medline
    • (2005) J Biosci , vol.30 , pp. 155-165
    • Kaas, J.H.1
  • 18
    • 11144250053 scopus 로고    scopus 로고
    • Retinol-binding protein gene is highly expressed in higher-order association areas of the primate neocortex
    • Medline
    • Komatsu Y, Watakabe A, Hashikawa T, Tochitani S, Yamamori T (2005) Retinol-binding protein gene is highly expressed in higher-order association areas of the primate neocortex. Cereb Cortex 15:96-108. Medline
    • (2005) Cereb Cortex , vol.15 , pp. 96-108
    • Komatsu, Y.1    Watakabe, A.2    Hashikawa, T.3    Tochitani, S.4    Yamamori, T.5
  • 19
    • 32244433670 scopus 로고    scopus 로고
    • Novel transcription factor zfh-5 is negatively regulated by its own antisense RNA in mouse brain
    • CrossRef Medline
    • Komine Y, Nakamura K, Katsuki M, Yamamori T (2006) Novel transcription factor zfh-5 is negatively regulated by its own antisense RNA in mouse brain. Mol Cell Neurosci 31:273-283. CrossRef Medline
    • (2006) Mol Cell Neurosci , vol.31 , pp. 273-283
    • Komine, Y.1    Nakamura, K.2    Katsuki, M.3    Yamamori, T.4
  • 20
    • 18944404300 scopus 로고    scopus 로고
    • The thymine DNA glycosylase MBD4 represses transcription and is associated with methylated p16(INK4a) and hMLH1 genes
    • CrossRef Medline
    • Kondo E, Gu Z, Horii A, Fukushige S (2005) The thymine DNA glycosylase MBD4 represses transcription and is associated with methylated p16(INK4a) and hMLH1 genes. Mol Cell Biol 25:4388-4396. CrossRef Medline
    • (2005) Mol Cell Biol , vol.25 , pp. 4388-4396
    • Kondo, E.1    Gu, Z.2    Horii, A.3    Fukushige, S.4
  • 21
    • 0036856355 scopus 로고    scopus 로고
    • MethPrimer: Designing primers for methylation PCRs
    • CrossRef Medline
    • Li LC, Dahiya R (2002) MethPrimer: designing primers for methylation PCRs. Bioinformatics 18:1427-1431. CrossRef Medline
    • (2002) Bioinformatics , vol.18 , pp. 1427-1431
    • Li, L.C.1    Dahiya, R.2
  • 22
    • 33746815365 scopus 로고    scopus 로고
    • The concerted modulation of proliferation and migration contributes to the specification of the cytoarchitecture and dimensions of cortical areas
    • Medline
    • Lukaszewicz A, Cortay V, Giroud P, Berland M, Smart I, Kennedy H, DehayC (2006) The concerted modulation of proliferation and migration contributes to the specification of the cytoarchitecture and dimensions of cortical areas. Cereb Cortex 16 [Suppl 1]:i26-i34. Medline
    • (2006) Cereb Cortex , vol.16 , Issue.SUPPL. 1
    • Lukaszewicz, A.1    Cortay, V.2    Giroud, P.3    Berland, M.4    Smart, I.5    Kennedy, H.6    Dehay, C.7
  • 23
    • 84874723700 scopus 로고    scopus 로고
    • Monocular inhibition reveals temporal and spatial changes in gene expression in the primary visual cortex of marmoset
    • Medline
    • Nakagami Y, Watakabe A, Yamamori T (2013) Monocular inhibition reveals temporal and spatial changes in gene expression in the primary visual cortex of marmoset. Front Neural Circuits 7:43. Medline
    • (2013) Front Neural Circuits , vol.7 , pp. 43
    • Nakagami, Y.1    Watakabe, A.2    Yamamori, T.3
  • 24
    • 33745294741 scopus 로고    scopus 로고
    • p300/Cyclic AMPresponsive element binding-binding protein mediates transcriptional coactivation by the CD28 T cell costimulatory receptor
    • Medline
    • Nandiwada SL, Li W, Zhang R, Mueller DL (2006) p300/Cyclic AMPresponsive element binding-binding protein mediates transcriptional coactivation by the CD28 T cell costimulatory receptor. J Immunol 177: 401-413. Medline
    • (2006) J Immunol , vol.177 , pp. 401-413
    • Nandiwada, S.L.1    Li, W.2    Zhang, R.3    Mueller, D.L.4
  • 25
    • 33847661809 scopus 로고    scopus 로고
    • Protocol for the fast chromatin immunoprecipitation (ChIP) method
    • CrossRef Medline
    • Nelson JD, Denisenko O, Bomsztyk K (2006) Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc 1:179-185. CrossRef Medline
    • (2006) Nat Protoc , vol.1 , pp. 179-185
    • Nelson, J.D.1    Denisenko, O.2    Bomsztyk, K.3
  • 26
    • 45049086433 scopus 로고    scopus 로고
    • Genetic regulation of arealization of the neocortex
    • CrossRef Medline
    • O'Leary DD, Sahara S (2008) Genetic regulation of arealization of the neocortex. Curr Opin Neurobiol 18:90-100. CrossRef Medline
    • (2008) Curr Opin Neurobiol , vol.18 , pp. 90-100
    • O'Leary, D.D.1    Sahara, S.2
  • 27
    • 58549108816 scopus 로고    scopus 로고
    • Pias3-dependent SUMOylation directs rod photoreceptor development
    • CrossRef Medline
    • Onishi A, Peng GH, Hsu C, Alexis U, Chen S, Blackshaw S (2009) Pias3-dependent SUMOylation directs rod photoreceptor development. Neuron 61:234-246. CrossRef Medline
    • (2009) Neuron , vol.61 , pp. 234-246
    • Onishi, A.1    Peng, G.H.2    Hsu, C.3    Alexis, U.4    Chen, S.5    Blackshaw, S.6
  • 28
    • 39049177674 scopus 로고    scopus 로고
    • The identification of a novel alternatively spliced form of the MBD4 DNA glycosylase
    • Medline
    • Owen RM, Baker RD, Bader S, Dunlop MG, Nicholl ID (2007) The identification of a novel alternatively spliced form of the MBD4 DNA glycosylase. Oncol Rep 17:111-116. Medline
    • (2007) Oncol Rep , vol.17 , pp. 111-116
    • Owen, R.M.1    Baker, R.D.2    Bader, S.3    Dunlop, M.G.4    Nicholl, I.D.5
  • 29
    • 34249279527 scopus 로고    scopus 로고
    • Stability and flexibility of epigenetic gene regulation inmammalian development
    • CrossRef Medline
    • ReikW (2007) Stability and flexibility of epigenetic gene regulation inmammalian development. Nature 447:425-432. CrossRef Medline
    • (2007) Nature , vol.447 , pp. 425-432
    • Reik, W.1
  • 30
    • 0035839126 scopus 로고    scopus 로고
    • Epigenetic reprogramming in mammalian development
    • CrossRef Medline
    • Reik W, Dean W, Walter J (2001) Epigenetic reprogramming in mammalian development. Science 293:1089-1093. CrossRef Medline
    • (2001) Science , vol.293 , pp. 1089-1093
    • Reik, W.1    Dean, W.2    Walter, J.3
  • 31
    • 77956578662 scopus 로고    scopus 로고
    • Prefrontal-enriched SLIT1 expression in Old World monkey cortex established during the postnatal development
    • CrossRef Medline
    • Sasaki T, Komatsu Y, Watakabe A, Sawada K, Yamamori T (2010) Prefrontal-enriched SLIT1 expression in Old World monkey cortex established during the postnatal development. Cereb Cortex 20:2496-2510. CrossRef Medline
    • (2010) Cereb Cortex , vol.20 , pp. 2496-2510
    • Sasaki, T.1    Komatsu, Y.2    Watakabe, A.3    Sawada, K.4    Yamamori, T.5
  • 32
    • 76849094693 scopus 로고    scopus 로고
    • Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state
    • CrossRef Medline
    • Skene PJ, Illingworth RS, Webb S, Kerr AR, James KD, Turner DJ, Andrews R, Bird AP (2010) Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state. Mol Cell 37:457-468. CrossRef Medline
    • (2010) Mol Cell , vol.37 , pp. 457-468
    • Skene, P.J.1    Illingworth, R.S.2    Webb, S.3    Kerr, A.R.4    James, K.D.5    Turner, D.J.6    Andrews, R.7    Bird, A.P.8
  • 34
    • 67651112061 scopus 로고    scopus 로고
    • Differential expression patterns of occ1-related genes in adult monkey visual cortex
    • CrossRef Medline
    • Takahata T, Komatsu Y, Watakabe A, Hashikawa T, Tochitani S, Yamamori T (2009) Differential expression patterns of occ1-related genes in adult monkey visual cortex. Cereb Cortex 19:1937-1951. CrossRef Medline
    • (2009) Cereb Cortex , vol.19 , pp. 1937-1951
    • Takahata, T.1    Komatsu, Y.2    Watakabe, A.3    Hashikawa, T.4    Tochitani, S.5    Yamamori, T.6
  • 35
    • 77954818977 scopus 로고    scopus 로고
    • Differential expression patterns of OCC1-related, extracellular matrix proteins in the lateral geniculate nucleus of macaque monkeys
    • CrossRef Medline
    • Takahata T, Hashikawa T, Tochitani S, Yamamori T (2010) Differential expression patterns of OCC1-related, extracellular matrix proteins in the lateral geniculate nucleus of macaque monkeys. J Chem Neuroanat 40: 112-122. CrossRef Medline
    • (2010) J Chem Neuroanat , vol.40 , pp. 112-122
    • Takahata, T.1    Hashikawa, T.2    Tochitani, S.3    Yamamori, T.4
  • 36
    • 84866111150 scopus 로고    scopus 로고
    • Differential expression patterns of striate cortex-enriched genes among old world, new world, and prosimian primates
    • Medline
    • Takahata T, Shukla R, Yamamori T, Kaas JH (2012) Differential expression patterns of striate cortex-enriched genes among old world, new world, and prosimian primates. Cereb Cortex 22:2313-2321. Medline
    • (2012) Cereb Cortex , vol.22 , pp. 2313-2321
    • Takahata, T.1    Shukla, R.2    Yamamori, T.3    Kaas, J.H.4
  • 37
    • 70450278828 scopus 로고    scopus 로고
    • Paraneoplastic antigen-like 5 gene (PNMA5) is preferentially expressed in the association areas in a primate specific manner
    • CrossRef Medline
    • Takaji M, Komatsu Y, Watakabe A, Hashikawa T, Yamamori T (2009) Paraneoplastic antigen-like 5 gene (PNMA5) is preferentially expressed in the association areas in a primate specific manner. Cereb Cortex 19:2865-2879. CrossRef Medline
    • (2009) Cereb Cortex , vol.19 , pp. 2865-2879
    • Takaji, M.1    Komatsu, Y.2    Watakabe, A.3    Hashikawa, T.4    Yamamori, T.5
  • 39
    • 58149380755 scopus 로고    scopus 로고
    • Targeted overexpression of human alpha-synuclein triggers microglial activation and an adaptive immune response in a mouse model of Parkinson disease
    • CrossRef Medline
    • Theodore S, Cao S, McLean PJ, Standaert DG (2008) Targeted overexpression of human alpha-synuclein triggers microglial activation and an adaptive immune response in a mouse model of Parkinson disease. J Neuropathol Exp Neurol 67:1149-1158. CrossRef Medline
    • (2008) J Neuropathol Exp Neurol , vol.67 , pp. 1149-1158
    • Theodore, S.1    Cao, S.2    McLean, P.J.3    Standaert, D.G.4
  • 40
    • 0035125907 scopus 로고    scopus 로고
    • The occ1 gene is preferentially expressed in the primary visual cortex in an activity-dependent manner: A pattern of gene expression related to the cytoarchitectonic area in adult macaque neocortex
    • CrossRef Medline
    • Tochitani S, Liang F, Watakabe A, Hashikawa T, Yamamori T (2001) The occ1 gene is preferentially expressed in the primary visual cortex in an activity-dependent manner: a pattern of gene expression related to the cytoarchitectonic area in adult macaque neocortex. Eur J Neurosci 13: 297-307. CrossRef Medline
    • (2001) Eur J Neurosci , vol.13 , pp. 297-307
    • Tochitani, S.1    Liang, F.2    Watakabe, A.3    Hashikawa, T.4    Yamamori, T.5
  • 41
    • 0034130327 scopus 로고    scopus 로고
    • Stat1 as a component of tumor necrosis factor alpha receptor 1-TRADD signaling complex to inhibit NF-kappaB activation
    • CrossRef Medline
    • Wang Y, Wu TR, Cai S, Welte T, Chin YE (2000) Stat1 as a component of tumor necrosis factor alpha receptor 1-TRADD signaling complex to inhibit NF-kappaB activation. Mol Cell Biol 20:4505-4512. CrossRef Medline
    • (2000) Mol Cell Biol , vol.20 , pp. 4505-4512
    • Wang, Y.1    Wu, T.R.2    Cai, S.3    Welte, T.4    Chin, Y.E.5
  • 44
    • 79952644629 scopus 로고    scopus 로고
    • Complete restoration of phenylalanine oxidation in phenylketonuria mouse by a self-complementary adeno-associated virus vector
    • CrossRef Medline
    • Yagi H, Ogura T, Mizukami H, Urabe M, Hamada H, Yoshikawa H, Ozawa K, Kume A (2011) Complete restoration of phenylalanine oxidation in phenylketonuria mouse by a self-complementary adeno-associated virus vector. J Gene Med 13:114-122. CrossRef Medline
    • (2011) J Gene Med , vol.13 , pp. 114-122
    • Yagi, H.1    Ogura, T.2    Mizukami, H.3    Urabe, M.4    Hamada, H.5    Yoshikawa, H.6    Ozawa, K.7    Kume, A.8
  • 45
    • 79958766990 scopus 로고    scopus 로고
    • Selective gene expression in regions of primate neocortex: Implications for cortical specialization
    • CrossRef Medline
    • Yamamori T (2011) Selective gene expression in regions of primate neocortex: Implications for cortical specialization. Prog Neurobiol 94:201-222. CrossRef Medline
    • (2011) Prog Neurobiol , vol.94 , pp. 201-222
    • Yamamori, T.1


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