Viral protein linear (VPL) nano-actuators

Proceedings of the IEEE Conference on Nanotechnology

Volumn 1, Issue , 2003, Pages 140-143

  Dubey, A ^a   Mavroidis, C ^a   Thornton, A ^b   Nikitczuk, K ^b   Yarmush, M L ^b  

^a RUTGERS UNIVERSITY   (United States)

^b RUTGERS UNIVERSITY   (United States)

Author keywords

Assembly; Biomembranes; Carbon nanotubes; Computational modeling; DNA; Hydraulic actuators; Maintenance; Micromotors; Nanobioscience; Protein engineering

Indexed keywords

ACTUATORS; ASSEMBLY; CARBON; CARBON NANOTUBES; CELL MEMBRANES; DNA; HYDRAULIC ACTUATORS; MAINTENANCE; MICROMOTORS; NANOTECHNOLOGY; NANOTUBES; PROTEINS; VIRUSES; YARN;

BIOMEMBRANES; BIOMOLECULAR MOTOR; COMPUTATIONAL MODEL; CONFORMATIONAL CHANGE; NANOBIOSCIENCES; PROTEIN ENGINEERING; VIRAL ENVELOPE PROTEINS; VIRAL PROTEIN LINEAR MOTORS;

LINEAR ACTUATORS;

EID: 84889764117     PISSN: 19449399     EISSN: 19449380     Source Type: Conference Proceeding    
DOI: 10.1109/NANO.2003.1231735     Document Type: Conference Paper

References (27)

1. Carr C. M. and Kim P., 1993, "A Spring-Loaded Mechanism for the Conformational Change of Influenza Hemagglutinin," Cell, 73, 823-832.
2. Block S.M., 1998, "Kinesin, What Gives?" Cell, 93, 5-8.
3. Schnitzer M.J. and Block S.M., 1997, "Kinesin Hydrolyses One ATP per 8-nm Step", Nature, 388, 386-390.
4. Wang M.D., Schnitzer M.J., Yin H., Landick R., Gelles J., Block S. M., 1998, "Force and Velocity Measured for Single Molecules of RNA Polymerase", Science, 282, 902-907.
5. Kitamura K., Tokunaga M., Iwane A.H., Yanagida T., 1999, "A Single Myosin Head Moves Along an Actin Filament With Regular Steps of ∼5.3nm", Nature, 397, 129.
6. Shingyoji C., Higuchi H., Yoshimura M., Katayama E. and Yanagida T., 1998, "Dynein arms are oscillating force generators", Nature, 393, 711-714.
7. Montemagno C.D., and Bachand G.D., 1999, "Constructing Nanomechanical Devices Powered by Biomolecular Motors", Nanotechnology, 10, 225-331.
8. Berg H.C., 1974, "Dynamic Properties of Bacterial Flagellar Motors", Nature, 249, 77-79.
9. Schalley C.A., Beizai K. and Vogtle F.K., 2001, "On the Way to Rotaxane-Based Molecular Motors: Studies in Molecular Mobility and Topological Chirality", Accounts of Chemical Research, 34, 465-476.
10. Erickson, H.P., 1997, "Stretching Single Protein Molecules: Titin is a Weird spring", Science, 276,1090-1092.
11. Mahadevan L. and Matsudaira P., 2000, "Motility Powered by Supramolecular Springs and Ratchets", Science, 288, 95-99.
12. Seeman N. C., 1998, "DNA Nanotechnology: Novel DNA Constructions", Annual Review of Biophysics and Biomolecular Structure, 27, 225-48.
13. Tobias I., Swigon D., Coleman B.D., 2000, "Elastic Stability of DNA Configurations I - General Theory", Physical Review E, 61(1), 747-58.
14. Yuqiu J., Juang C-B, Keller D., Bustamante C., Beach D., Houseal T., and Builes E., 1992, "Mechanical, Electrical, and Chemical Manipulation of Single DNA Molecules", Nanotechnology, 3, 16-20.
15. Hu J., Zhang Y., Gao H., Li M., Hartmann U., 2002, "Artificial DNA Patterns by Mechanical Nanomanipulation", Nanoletters, 2, No. 1, 55-57.
16. Mao C., Sun W., Shen Z., and Seeman N., 1999, "A Nanomechanical Device Based on the B-Z Transition of DNA", Nature, 397, 144-146.
17. Yan H., Zhang X., Shen Z, and Seeman N., 2002, "A Robust DNA Mechanical Device Controlled by Hybridization Topology", Nature, 415, 62-65.
18. Yurke B., Turberfield A.J., Mills A.P., Simmel F.C., and Neumann J.L., 2000, "A DNA-Fuelled Molecular Machine Made of DNA" Nature, 406, 605-608.
19. Wilson I.A., Skehel J.J., Wiley D.C., 1981, "Structure of the haemagglutinin membrane glycoprotein of influenza virus at 3 A resolution", Nature, 289, 377-373.
20. Skehel J.J., Bayley P.M., Brown E.B., Martin S.R., Waterfield M.D., White J.M., Wilson I.A., Wiley D.C., 1982, "Changes in the conformation of influenza virus hemagglutinin at the pH optimum of virus-mediated membrane fusion", PNAS USA, 79, 968-972.
21. Sauter N.K, Bednarski M.D., Wurzburg B.A., Hanson J.E., Whitesides G.M., Skehel J.J., and Wiley, D.C., 1989, "Hemagglutinins from Two Influenza Virus Variants Bind to Sialic Acid Derivatives with Millimolar Dissociation Constants: A 500 MHz Proton Nuclear Magnetic Resonance Study", Biochemistry, 28, 8388-8396.
22. Tan K., Liu J., Wang J., Shen S., Lu M., 1997, "Atomic Structure of a Thermostable Domain of HIV-1 gp41", Proceedings of the National Academy of Sciences USA, 94,12303-12308.
23. Brooks R., Bruccoleri R.E., Olafson B.D., States D.J., Swaminathan S., and Karplus M., 1983, "CHARMM: A Program for Macromolecular Energy, Minimization, and Dynamics Calculations", Journal of Computational Chemistry 4, 187-217.
24. Schlitter J., 1994, "Targeted Molecular Dynamics: A New Approach for Searching Pathways of Conformational Transitions", Journal of Molecular Graphics, 12,84-89.
25. Berman H.M, Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., and Bourne P.E., 2000, "The Protein Data Bank," Nucleic Acid Research, 28, 235-242.
26. Lazaridis T., and Karplus M., 1999, "Effective Energy Function for Proteins in Solution," Proteins: Structure, Function and Genetics, 35,133-152.
27. Mathys S., Evans T.C., Chute I.C., Wu H., Chong S., Benner J., Liu X.Q., Xu M.Q., 1999, "Characterization of a Self-Splicing Mini-Intein and its Conversion into Autocatalytic N- and C-terminal Cleavage Elements: Facile Production of Protein Building Blocks for Protein Ligation," Gene, 231, 1-13.