-
1
-
-
35448944045
-
Recombination diversifies chloroplast trnF pseudogenes in Arabidopsis lyrata
-
Ansell, S.W., Schneider, H., Pedersen, N., Grundmann, M., Russell, S.J. & Vogel, J.C. (2007) Recombination diversifies chloroplast trnF pseudogenes in Arabidopsis lyrata. Journal of Evolutionary Biology, 20, 2400-2411.
-
(2007)
Journal of Evolutionary Biology
, vol.20
, pp. 2400-2411
-
-
Ansell, S.W.1
Schneider, H.2
Pedersen, N.3
Grundmann, M.4
Russell, S.J.5
Vogel, J.C.6
-
2
-
-
0028093739
-
A phylogenetic analysis of Epilobium (Onagraceae) based on nuclear ribosomal DNA sequences
-
Baum, D.A., Sytsma, K.J. & Hoch, P.C. (1994) A phylogenetic analysis of Epilobium (Onagraceae) based on nuclear ribosomal DNA sequences. Systematic Botany, 19, 363-388.
-
(1994)
Systematic Botany
, vol.19
, pp. 363-388
-
-
Baum, D.A.1
Sytsma, K.J.2
Hoch, P.C.3
-
3
-
-
78650445809
-
Recent trends in molecular phylogenetic analysis: where to next?
-
Blair, C. & Murphy, R.W. (2011) Recent trends in molecular phylogenetic analysis: where to next? Journal of Heredity, 102, 130-138.
-
(2011)
Journal of Heredity
, vol.102
, pp. 130-138
-
-
Blair, C.1
Murphy, R.W.2
-
4
-
-
45349101600
-
network: A Package for Managing Relational Data in R
-
Butts, C.T. (2008) network: A Package for Managing Relational Data in R. Journal of Statistical Software, 24, 1-36.
-
(2008)
Journal of Statistical Software
, vol.24
, pp. 1-36
-
-
Butts, C.T.1
-
5
-
-
79952321812
-
The performance of the Congruence Among Distance Matrices (CADM) test in phylogenetic analysis
-
Campbell, V., Legendre, P. & Lapointe, F.-J. (2011) The performance of the Congruence Among Distance Matrices (CADM) test in phylogenetic analysis. BMC Evolutionary Biology, 11, 64.
-
(2011)
BMC Evolutionary Biology
, vol.11
, pp. 64
-
-
Campbell, V.1
Legendre, P.2
Lapointe, F.-J.3
-
6
-
-
79955085425
-
Integrating statistical genetic and geospatial methods brings new power to phylogeography
-
Chan, L.M., Brown, J.L. & Yoder, A.D. (2011) Integrating statistical genetic and geospatial methods brings new power to phylogeography. Molecular phylogenetics and evolution, 59, 523-537.
-
(2011)
Molecular phylogenetics and evolution
, vol.59
, pp. 523-537
-
-
Chan, L.M.1
Brown, J.L.2
Yoder, A.D.3
-
7
-
-
43349094507
-
The igraph software package for complex network research
-
1695.
-
Csardi, G. & Nepusz, T. (2006) The igraph software package for complex network research. InterJournal Complex Systems, 1695.
-
(2006)
InterJournal Complex Systems
-
-
Csardi, G.1
Nepusz, T.2
-
8
-
-
77954476819
-
Species-level phylogeny of Allium subgenus Melanocrommyum: Incomplete lineage sorting, hybridization and trnF gene duplication
-
Gurushidze, M., Fritsch, R.M. & Blattner, F.R. (2010) Species-level phylogeny of Allium subgenus Melanocrommyum: Incomplete lineage sorting, hybridization and trnF gene duplication. Taxon, 59, 829-840.
-
(2010)
Taxon
, vol.59
, pp. 829-840
-
-
Gurushidze, M.1
Fritsch, R.M.2
Blattner, F.R.3
-
9
-
-
84863715638
-
Trees and/or networks to display intraspecific DNA sequence variation?
-
Mardulyn, P. (2012) Trees and/or networks to display intraspecific DNA sequence variation? Molecular Ecology, 21, 3385-3390.
-
(2012)
Molecular Ecology
, vol.21
, pp. 3385-3390
-
-
Mardulyn, P.1
-
10
-
-
17044401319
-
Networks in phylogenetic analysis: new tools for population biology
-
Morrison, D.A. (2005) Networks in phylogenetic analysis: new tools for population biology. International Journal for Parasitology, 35, 567-582.
-
(2005)
International Journal for Parasitology
, vol.35
, pp. 567-582
-
-
Morrison, D.A.1
-
11
-
-
33244488048
-
Incorporating information from length-mutational events into phylogenetic analysis
-
Müller, K. (2006) Incorporating information from length-mutational events into phylogenetic analysis. Molecular Phylogenetics and Evolution, 38, 667-676.
-
(2006)
Molecular Phylogenetics and Evolution
, vol.38
, pp. 667-676
-
-
Müller, K.1
-
12
-
-
33847312692
-
How should gaps be treated in parsimony? A comparison of approaches using simulation
-
Ogden, T.H. & Rosenberg, M.S. (2007) How should gaps be treated in parsimony? A comparison of approaches using simulation. Molecular Phylogenetics and Evolution, 42, 817-826.
-
(2007)
Molecular Phylogenetics and Evolution
, vol.42
, pp. 817-826
-
-
Ogden, T.H.1
Rosenberg, M.S.2
-
13
-
-
1042304216
-
APE: analyses of phylogenetics and evolution in R language
-
Paradis, E., Claude, J. & Strimmer, K. (2004) APE: analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290.
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
14
-
-
52949150097
-
Probabilistic phylogenetic inference with insertions and deletions
-
Rivas, E. & Eddy, S. (2008) Probabilistic phylogenetic inference with insertions and deletions. PLoS Computational Biology, 4, e1000172.
-
(2008)
PLoS Computational Biology
, vol.4
-
-
Rivas, E.1
Eddy, S.2
-
15
-
-
77949341703
-
Toward extracting all phylogenetic information from matrices of evolutionary distances
-
Roch, S. (2010) Toward extracting all phylogenetic information from matrices of evolutionary distances. Science, 327, 1376-1379.
-
(2010)
Science
, vol.327
, pp. 1376-1379
-
-
Roch, S.1
-
16
-
-
57749196997
-
Network analysis identifies weak and strong links in a metapopulation system
-
Rozenfeld, A.F., Arnaud-Haond, S., Hernández-García, E., Eguíluz, V.M., Serrão, E.A. & Duarte, C.M. (2008) Network analysis identifies weak and strong links in a metapopulation system. Proceedings of the National Academy of Sciences, 105, 18824-18829.
-
(2008)
Proceedings of the National Academy of Sciences
, vol.105
, pp. 18824-18829
-
-
Rozenfeld, A.F.1
Arnaud-Haond, S.2
Hernández-García, E.3
Eguíluz, V.M.4
Serrão, E.A.5
Duarte, C.M.6
-
17
-
-
34447280568
-
The relative performance of indel-coding methods in simulations
-
Simmons, M.P., Müller, K. & Norton, A.P. (2007) The relative performance of indel-coding methods in simulations. Molecular Phylogenetics and Evolution, 44, 724-740.
-
(2007)
Molecular Phylogenetics and Evolution
, vol.44
, pp. 724-740
-
-
Simmons, M.P.1
Müller, K.2
Norton, A.P.3
-
18
-
-
0035527375
-
Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses
-
Simmons, M., Ochoterena, H. & Carr, T. (2001) Incorporation, relative homoplasy, and effect of gap characters in sequence-based phylogenetic analyses. Systematic Biology, 50, 454-462.
-
(2001)
Systematic Biology
, vol.50
, pp. 454-462
-
-
Simmons, M.1
Ochoterena, H.2
Carr, T.3
-
19
-
-
0034350427
-
Gaps as Characters in Sequence-Based Phylogenetic Analyses
-
Simmons, M.P. & Ochoterena, H. (2000) Gaps as Characters in Sequence-Based Phylogenetic Analyses. Systematic Biology, 49, 369-381.
-
(2000)
Systematic Biology
, vol.49
, pp. 369-381
-
-
Simmons, M.P.1
Ochoterena, H.2
-
20
-
-
34547489084
-
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
-
Talavera, G. & Castresana, J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology, 56, 564-577.
-
(2007)
Systematic Biology
, vol.56
, pp. 564-577
-
-
Talavera, G.1
Castresana, J.2
-
21
-
-
3342920601
-
Prospects for inferring very large phylogenies by using the neighbor-joining method
-
Tamura, K., Nei, M. & Kumar, S. (2004) Prospects for inferring very large phylogenies by using the neighbor-joining method. Proceedings of the National Academy of Sciences of the United States of America, 101, 11030-11035.
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, pp. 11030-11035
-
-
Tamura, K.1
Nei, M.2
Kumar, S.3
-
22
-
-
0036456920
-
Weighting indels as phylogenetic markers of 18S rDNA sequences in Diptera and Strepsiptera
-
Vogt, L. (2002) Weighting indels as phylogenetic markers of 18S rDNA sequences in Diptera and Strepsiptera. Organisms Diversity & Evolution, 2, 335-349.
-
(2002)
Organisms Diversity & Evolution
, vol.2
, pp. 335-349
-
-
Vogt, L.1
-
23
-
-
84878110606
-
Comparative phylogeography of the Smilax hispida group (Smilacaceae) in eastern Asia and North America - Implications for allopatric speciation, causes of diversity disparity, and origins of temperate elements in Mexico
-
Zhao, Y., Qi, Z., Ma, W., Dai, Q., Li, P., Cameron, K.M., Lee, J., Xiang, Q.-Y. & Fu, C., (2013) Comparative phylogeography of the Smilax hispida group (Smilacaceae) in eastern Asia and North America - Implications for allopatric speciation, causes of diversity disparity, and origins of temperate elements in Mexico. Molecular Phylogenetics and Evolution, 68, 300-311.
-
(2013)
Molecular Phylogenetics and Evolution
, vol.68
, pp. 300-311
-
-
Zhao, Y.1
Qi, Z.2
Ma, W.3
Dai, Q.4
Li, P.5
Cameron, K.M.6
Lee, J.7
Xiang, Q.-Y.8
Fu, C.9
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