-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
27844580665
-
Thalassobius mediterraneus gen. nov., sp. nov., and reclassification of Ruegeria gelatinovorans as Thalassobius gelatinovorus comb. nov
-
Arahal, D. R., Macián, M. C., Garay, E. & Pujalte, M. J. (2005). Thalassobius mediterraneus gen. nov., sp. nov., and reclassification of Ruegeria gelatinovorans as Thalassobius gelatinovorus comb. nov. Int J Syst Evol Microbiol 55, 2371-2376.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 2371-2376
-
-
Arahal, D.R.1
McIán, M.C.2
Garay, E.3
Pujalte, M.J.4
-
4
-
-
26844510681
-
Overview of the marine roseobacter lineage
-
Buchan, A., González, J. M. & Moran, M. A. (2005). Overview of the marine roseobacter lineage. Appl Environ Microbiol 71, 5665-5677.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 5665-5677
-
-
Buchan, A.1
González, J.M.2
Moran, M.A.3
-
5
-
-
79955384560
-
Shimia isoporae sp. nov., isolated from the reef-building coral Isopora palifera
-
Chen, M.-H., Sheu, S.-Y., Chen, C. A., Wang, J.-T. & Chen, W.-M. (2011). Shimia isoporae sp. nov., isolated from the reef-building coral Isopora palifera. Int J Syst Evol Microbiol 61, 823-827.
-
(2011)
Int J Syst Evol Microbiol
, vol.61
, pp. 823-827
-
-
Chen, M.-H.1
Sheu, S.-Y.2
Chen, C.A.3
Wang, J.-T.4
Chen, W.-M.5
-
6
-
-
33747879303
-
Shimia marina gen. nov., sp. nov., a novel bacterium of the Roseobacter clade isolated from biofilm in a coastal fish farm
-
Choi, D. H. & Cho, B. C. (2006). Shimia marina gen. nov., sp. nov., a novel bacterium of the Roseobacter clade isolated from biofilm in a coastal fish farm. Int J Syst Evol Microbiol 56, 1869-1873.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 1869-1873
-
-
Choi, D.H.1
Cho, B.C.2
-
7
-
-
77956867761
-
Analysis of isoprenoid quinones
-
Collins, M. D. (1985). Analysis of isoprenoid quinones. Methods Microbiol 18, 329-366.
-
(1985)
Methods Microbiol
, vol.18
, pp. 329-366
-
-
Collins, M.D.1
-
8
-
-
0033960446
-
Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes
-
Dang, H. & Lovell, C. R. (2000). Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes. Appl Environ Microbiol 66, 467-475.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 467-475
-
-
Dang, H.1
Lovell, C.R.2
-
9
-
-
0002701059
-
Structural lipids of eubacteria
-
In Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley
-
Embley, T. M. & Wait, R. (1994). Structural lipids of eubacteria. In Chemical Methods in Prokaryotic Systematics, pp. 121-161. Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley.
-
(1994)
Chemical Methods in Prokaryotic Systematics
, pp. 121-161
-
-
Embley, T.M.1
Wait, R.2
-
10
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
11
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
84959747425
-
Towards defining the course of evolution: Minimum change for a specific tree topology
-
Fitch, W. M. (1971). Towards defining the course of evolution: minimum change for a specific tree topology. Syst Biol 20, 406-416.
-
(1971)
Syst Biol
, vol.20
, pp. 406-416
-
-
Fitch, W.M.1
-
14
-
-
0000262823
-
Evolution, diversity and molecular ecology of marine prokaryotes
-
In Edited by D. L. Kirchman. New York: Wiley
-
Giovannoni, S. J. & Rappé, M. S. (2000). Evolution, diversity and molecular ecology of marine prokaryotes. In Microbial Ecology of the Oceans, pp. 47-84. Edited by D. L. Kirchman. New York: Wiley.
-
(2000)
Microbial Ecology of the Oceans
, pp. 47-84
-
-
Giovannoni, S.J.1
Rappé, M.S.2
-
15
-
-
0031832694
-
Sequencing multimegabase-template DNA with BigDye terminator chemistry
-
Heiner, C. R., Hunkapiller, K. L., Chen, S. M., Glass, J. I. & Chen, E. Y. (1998). Sequencing multimegabase-template DNA with BigDye terminator chemistry. Genome Res 8, 557-561.
-
(1998)
Genome Res
, vol.8
, pp. 557-561
-
-
Heiner, C.R.1
Hunkapiller, K.L.2
Chen, S.M.3
Glass, J.I.4
Chen, E.Y.5
-
16
-
-
0029799185
-
Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
-
Kämpfer, P. & Kroppenstedt, R. M. (1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989-1005.
-
(1996)
Can J Microbiol
, vol.42
, pp. 989-1005
-
-
Kämpfer, P.1
Kroppenstedt, R.M.2
-
17
-
-
84863230041
-
Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
-
Kim, O.-S., Cho, Y.-J., Lee, K., Yoon, S.-H., Kim, M., Na, H., Park, S.-C., Jeon, Y. S., Lee, J.-H. & other authors (2012). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62, 716-721.
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 716-721
-
-
Kim, O.-S.1
Cho, Y.-J.2
Lee, K.3
Yoon, S.-H.4
Kim, M.5
Na, H.6
Park, S.-C.7
Jeon, Y.S.8
Lee, J.-H.9
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0000198211
-
Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
-
Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 159-167
-
-
Mesbah, M.1
Premachandran, U.2
Whitman, W.B.3
-
20
-
-
0021182575
-
An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
-
Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, A. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241.
-
(1984)
J Microbiol Methods
, vol.2
, pp. 233-241
-
-
Minnikin, D.E.1
O'Donnell, A.G.2
Goodfellow, M.3
Alderson, G.4
Athalye, M.5
Schaal, A.6
Parlett, J.H.7
-
21
-
-
0002435103
-
Determinative and cytological light microscopy
-
In Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
-
Murray, R. G. E., Doetsch, R. N. & Robinow, C. F. (1994). Determinative and cytological light microscopy. In Methods for General and Molecular Bacteriology, pp. 21-41. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 21-41
-
-
Murray, R.G.E.1
Doetsch, R.N.2
Robinow, C.F.3
-
22
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
23
-
-
0141810217
-
Identification of bacteria by gas chromatography of cellular fatty acids
-
Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
-
(1990)
USFCC Newsl
, vol.20
, pp. 16
-
-
Sasser, M.1
-
24
-
-
0020577019
-
Distribution of polyamines in methanogenic bacteria
-
Scherer, P. & Kneifel, H. (1983). Distribution of polyamines in methanogenic bacteria. J Bacteriol 154, 1315-1322.
-
(1983)
J Bacteriol
, vol.154
, pp. 1315-1322
-
-
Scherer, P.1
Kneifel, H.2
-
25
-
-
0842285837
-
A newly discovered Roseobacter cluster in temperate and polar oceans
-
Selje, N., Simon, M. & Brinkhoff, T. (2004). A newly discovered Roseobacter cluster in temperate and polar oceans. Nature 427, 445-448.
-
(2004)
Nature
, vol.427
, pp. 445-448
-
-
Selje, N.1
Simon, M.2
Brinkhoff, T.3
-
26
-
-
84883767599
-
Sphingomicrobium astaxanthinifaciens sp. nov., an astaxanthinproducing glycolipid-rich bacterium isolated from surface seawater and emended description of the genus Sphingomicrobium
-
Shahina, M., Hameed, A., Lin, S.-Y., Hsu, Y.-H., Liu, Y.-C., Cheng, I.-C., Lee, M.-R., Lai, W.-A., Lee, R.-J. & Young, C.-C. (2013). Sphingomicrobium astaxanthinifaciens sp. nov., an astaxanthinproducing glycolipid-rich bacterium isolated from surface seawater and emended description of the genus Sphingomicrobium. Int J Syst Evol Microbiol 63, 3415-3422.
-
(2013)
Int J Syst Evol Microbiol
, vol.63
, pp. 3415-3422
-
-
Shahina, M.1
Hameed, A.2
Lin, S.-Y.3
Hsu, Y.-H.4
Liu, Y.-C.5
Cheng, I.-C.6
Lee, M.-R.7
Lai, W.-A.8
Lee, R.-J.9
Young, C.-C.10
-
27
-
-
0000612080
-
Phenotypic characterization
-
In Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
-
Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
-
(1994)
Methods for General and Molecular Bacteriology
, pp. 607-654
-
-
Smibert, R.M.1
Krieg, N.R.2
-
28
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
29
-
-
0020032328
-
Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen
-
Teather, R. M. & Wood, P. J. (1982). Use of Congo red-polysaccharide interactions in enumeration and characterization of cellulolytic bacteria from the bovine rumen. Appl Environ Microbiol 43, 777-780.
-
(1982)
Appl Environ Microbiol
, vol.43
, pp. 777-780
-
-
Teather, R.M.1
Wood, P.J.2
-
30
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
31
-
-
76849088617
-
Notes on the characterization of prokaryote strains for taxonomic purposes
-
Tindall, B. J., Rosselló-Móra, R., Busse, H.-J., Ludwig, W. & Kämpfer, P. (2010). Notes on the characterization of prokaryote strains for taxonomic purposes. Int J Syst Evol Microbiol 60, 249-266.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 249-266
-
-
Tindall, B.J.1
Rosselló-Móra, R.2
Busse, H.-J.3
Ludwig, W.4
Kämpfer, P.5
-
32
-
-
0029942146
-
Polyphasic taxonomy, a consensus approach to bacterial systematics
-
Vandamme, P., Pot, B., Gillis, M., de Vos, P., Kersters, K. & Swings, J. (1996). Polyphasic taxonomy, a consensus approach to bacterial systematics. Microbiol Rev 60, 407-438.
-
(1996)
Microbiol Rev
, vol.60
, pp. 407-438
-
-
Vandamme, P.1
Pot, B.2
Gillis, M.3
de Vos, P.4
Kersters, K.5
Swings, J.6
-
33
-
-
0035221043
-
Automated fluorescent DNA sequencing on the ABI PRISM 310 Genetic Analyzer
-
Watts, D. & MacBeath, J. R. (2001). Automated fluorescent DNA sequencing on the ABI PRISM 310 Genetic Analyzer. Methods Mol Biol 167, 153-170.
-
(2001)
Methods Mol Biol
, vol.167
, pp. 153-170
-
-
Watts, D.1
McBeath, J.R.2
|