Characterization and genetic mapping of a new blood-flesh trait controlled by the single dominant locus DBF in peach

Tree Genetics and Genomes

Volumn 9, Issue 6, 2013, Pages 1435-1446

  Shen, Zhijun ^a   Confolent, Carole ^b   Lambert, Patrick ^b   Poëssel, Jean Luc ^b   Quilot Turion, Bénédicte ^b   Yu, Mingliang ^a   Ma, Ruijuan ^a   Pascal, Thierry ^b  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b Researches Center of Avignon   (France)

Author keywords

Anthocyanins; Candidate gene; Genetic map; Mesocarp; PprMYB10; Prunus persica; SSR markers

Indexed keywords

PRUNUS PERSICA;

EID: 84888135361     PISSN: 16142942     EISSN: 16142950     Source Type: Journal    
DOI: 10.1007/s11295-013-0649-1     Document Type: Article

References (49)

1. Abajian C (1994) Sputnik program+, http://www. abajian. com/sputnik. Accessed 29 July 2012.
2. Arús P, Verde I, Sosinski B, Zhebentyayeva T, Abbott AG (2012) The peach genome. Tree Genet Genomes 8: 531-547.
3. Bernatzky R, Tanksley SD (1986) Genetics of actin-related sequences in tomato. Theor Appl Genet 72: 314-321.
4. Butelli E, Titta L, Giorgio M, Mock HP, Matros A, Peterek S, Schijlen EG, Hall RD, Bovy AG, Luo J, Martin C (2008) Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors. Nat Biotechnol 26: 1301-1308.
5. Cevallos-Casals BA, Byrne D, Okie WR, Cisneros-Zevallos L (2006) Selecting new peach and plum genotypes rich in phenolic compounds and enhanced functional properties. Food Chem 96: 273-280.
6. Chagné D, Carlisle CM, Blond C, Volz RK, Whitworth CJ, Oraguzie NC, Crowhurst RN, Allan AC, Espley RV, Hellens RP, Gardiner SE (2007) Mapping a candidate gene (MdMYB10) for red flesh and foliage colour in apple. BMC Genomics 8: 212.
7. Chaparro JX, Werner DJ, O'Malley D, Sederoff RR (1994) Targeted mapping and linkage analysis of morphological isozyme, and RAPD markers in peach. Theor Appl Genet 87: 805-815.
8. Chaparro JX, Werner DJ, Whetten RW, O'Malley DM (1995) Inheritance, genetic interaction and biochemical characterization of anthocyanin phenotypes in peach. J Hered 86: 32-38.
9. Dirlewanger E, Graziano E, Joobeur T, Garriga-Calderé F, Cosson P, Howad W, Arús P (2004) Comparative mapping and marker assisted selection in Rosaceae fruit crops. Proc Nat Acad Sci USA 101: 9891-9896.
10. Dragsted LO, Krath BN, Ravn-Haren LG, Vogel UB, Vinggaard AM, Jensen PB, Loft S, Rasmussen SE, Sandström B, Pedersen A (2006) Biological effects of fruit and vegetables. Proc Nutr Soc 65: 61-67.
11. Espley RV, Brendolise C, Chagné D, Kutty-Amma S, Green S, Volz R, Putterill J, Schouten HJ, Gardiner SE, Hellens RP, Allan AC (2009) Multiple repeats of a promoter segment causes transcription factor auto regulation in red apples. Plant Cell 21: 168-183.
12. Feild TS, Lee DW, Holbrook NM (2001) Why leaves turn red in autumn. The role of anthocyanins in senescing leaves of red-osier dogwood. Plant Physiol 127(2): 566-574.
13. Gillen AM, Bliss FA (2005) Identification and mapping of markers linked to the Mi gene for root-not nematode resistance in peach. J Amer Soc Hort Sci 130(1): 24-33.
14. Holton TA, Cornish EC (1995) Genetics and biochemistry of anthocyanin biosynthesis. Plant Cell 7: 1071-1083.
15. Hsia CL, Luh BS, Chichester CO (1965) Anthocyanin in freestone peaches. J Food Sci 30: 5-12.
16. Jaeger SR, Harker FR (2005) Consumer evaluation of novel kiwifruit: willingness-to-pay. J Sci Food Agr 85: 2519-2526.
17. Joobeur T (1998) Construction of a molecular marker map and genetic analysis of agronomic characters in Prunus. Ph. D. Thesis, Dissertation, University of Lleida, Spain.
18. Kosambi DD (1944) The estimation of map distance from recombination values. Ann Eugen Rep Camb 12: 172-175.
19. 2 gene conferring resistance to the green peach aphid (Myzus persicae Sulzer) in the peach cultivar "Rubira®". Tree Genet Genomes 7: 057-1068.
20. Lincoln SE, Daly MJ, Lander ES (1992) Constructing genetic maps with Mapmaker/exp 3. 0, 3rd edn. Whitehead Institute Technical.
21. Lin-Wang K, Bolitho K, Grafton K, Kortstee A, Karunairetnam S, McGhie TK, Espley RV, Hellens RP, Allan AC (2010) An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae. BMC Plant Biol 10: 50.
22. Lu SY, Yu ML, Ma RJ, Shen ZJ (2010) Analysis of genetic diversity and relationship of crisp peach by SSR. J Plant Genet Resour 11(3): 374-379.
23. Martínez-García PJ, Parfitt DE, Ogundiwin EA, Fass J, Chan HM, Ahmad R, Lurie S, Dandekar A, Gradziel TM, Crisosto CH (2013) High density SNP mapping and QTL analysis for fruit quality characteristics in peach (Prunus persica L.). Tree Genet Genomes 9: 19-36.
24. Martins TR, Berg JJ, Blinka S, Rausher MD, Baum DA (2013) Precise spatio-temporal regulation of the anthocyanin biosynthetic pathway leads to petal spot formation in Clarkia gracilis (Onagraceae). New Phytol 197: 958-969.
25. Okie WR (1998) Handbook of peach and nectarine varieties: performance in the southeastern United States and index of names. US Dept Agr Hdbk No. 714.
26. Pascal T, Monteux-Caillet R (1998) Peach breeding in France. Acta Hort 465: 117-123.
27. Petroni K, Tonelli C (2011) Recent advances on the regulation of anthocyanin synthesis in reproductive organs. Plant Sci 181: 219-229.
28. Pozzi C, Vecchietti A (2009) Peach structural genomics. In: Folta KM, Gardiner SE (eds) Genetics and genomics of Rosaceae. Springer, New York, pp 235-257.
29. Regan BC, Julliot C, Simmen B, Vienot F, Charles-Dominique P, Mollon JD (2001) Fruits, foliage and the evolution of primate colour vision. Philos Trans R Soc Lond B Biol Sci 356(1407): 229-283.
30. Ross JA, Kasum CM (2002) Dietary flavonoids: Bioavailability metabolic effects, and safety. Annu Rev Nutr 22: 19-34.
31. Scorza R, Sherman WB (1996) Peaches. In: Janick J, Moore JN (eds) Fruit breeding. Tree and tropical fruits, vol 1. Wiley, New York, pp 325-340.
32. Sekido K, Hayashi Y, Yamada K, Shiratake K, Matsumoto S, Maejima T, Komatsu H (2010) Efficient breeding system for red-fleshed apple based on linkage with S3- RNase allele in 'Pink Pearl'. HortSci 45: 534-537.
33. Shin WH, Park SJ, Kim EJ (2006) Protective effect of anthocyanins in middle cerebral artery occlusion and reperfusion model of cerebral ischemia in rats. Life Sci 79: 130-137.
34. Sooriyapathirana SS, Khan A, Sebolt AM, Wang D, Bushakra JM, Wang KL, Allan CA, Gardiner SE, Chagné D, Iezzoni AF (2010) QTL analysis and candidate gene mapping for skin and flesh color in sweet cherry fruit (Prunus avium L.). Tree Genet Genomes 6: 821-832.
35. Tanaka Y, Sasaki N, Ohmiya A (2008) Biosynthesis of plant pigments: anthocyanins, betalains and carotenoids. Plant J 54(4): 733-749.
36. van Blaricom LO, Senn TL (1967) Anthocyanin pigments in freestone peaches grown in the Southeast. Proc Am Soc Hort Sci 90: 541-545.
37. van Nocker S, Berry G, Najdowski J, Michelutti R, Luffman M, Forsline P, Alsmairat N, Beaudry R, Nair MG, Ordidge M (2012) Genetic diversity of red-fleshed apples (Malus). Euphytica 185: 281-293.
38. Verde I, Abbott AG, Scalabrin S, Jung S, Shu S, Marroni F, Zhebentyayeva T, Dettori MT, Grimwood J, Cattonaro F, Zuccolo A, Rossini L, Jenkins J, Vendramin E, Meisel LA, Decroocq V, Sosinski V, Prochnik S, Mitros T, Policriti A, Cipriani G, Dondini L, Ficklin S, Mgoodstein D, Xuan P, Del Fabbro C, Aramini V, Copetti D, Gonzalez S, Shorner D, Falchi R, Lucas S, Mica E, Maldonado J, Lazzari B, Bielenberg D, Pirona R, Miculan M, Barakat A, Testolin R, Stellal A, Tartarini S, Tonutti P, Arús P, Orellana A, Wells C, Main D, Vizzotto G, Silva H, Salamini F, Schmutz J, Morgante M, Rokhsar DS (2013) The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution. Nat Gen. doi: 10. 1038/ng. 2586.
39. Vinson J, Zubik L, Bose P, Samman N, Proch J (2005) Dried fruits: excellent in vitro and in vivo antioxidants. J Am Coll Nutr 24: 44-50.
40. Volz R, Oraguzie N, Whitworth C, How N, Chagné D, Carlisle C, Gardiner S, Rikkerink E, Lawerence T (2009) Breeding for red flesh colour in apple: progress and challenges. Acta Hort 841: 337-342.
41. Voorrips RE (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. J Hered 93(1): 77-78.
42. Wang ZH, Zhuang EJ (2002) Monograph for Chinese Fruits. Peach. Chinese Forest Press, Beijing.
43. Werner DJ, Creller MA, Chaparro JX (1998) Inheritance of the blood-flesh trait in peach. Hortscience 33(7): 1243-1246.
44. Williams CM, Mohsen M, Vauzour D, Rendeiro C, Butler LT, Ellis JA, Whiteman M, Spencer JPE (2008) Blueberry-induced changes in spatial working memory correlate with changes in hippocampal CREB phosphorylation and brain-derived neurotrophic factor (BDNF) levels. Free Radic Biol Med 45: 295-305.
45. Winkel-Shirley B (2001) Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiol 126(2): 485-493.
46. Xie R, Zheng L, He S, Zheng Y, Yi S, Deng L (2011) Anthocyanin biosynthesis in fruit tree crops: Genes and their regulation. Afr J Biotech 10(86): 19890-19897.
47. Xu Q, Yu K, Zhu A, Ye J, Liu Q, Zhang J, Deng X (2009) Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant. BMC Genom 10: 540.
48. Yamamoto T, Shimada T, Imai T, Yaegaki H, Haji T, Matsuta N, Yamaguchi M, Hayashi T (2001) Characterization of morphological traits based on a genetic linkage map in peach. Breed Sci 51: 271-278.
49. Yamamoto T, Yamaguchi M, Hayashi T (2005) An integrated genetic linkage map of peach by SSR, STS, AFLP and RADP. J Japan Soc Hort Sci 74(3): 204-213.