A geospatial assessment of the relationship between reef flat community calcium carbonate production and wave energy

Coral Reefs

Volumn 32, Issue 4, 2013, Pages 1025-1039

  Hamylton, S M ^a   Pescud, A ^a   Leon, J X ^b   Callaghan, D P ^b  

^a UNIVERSITY OF WOLLONGONG   (Australia)

^b UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Bathymetry; Calcification; Remote sensing; Rugosity

Indexed keywords

BATHYMETRY; BENTHOS; CALCIFICATION; CALCIUM CARBONATE; COMMUNITY COMPOSITION; CORAL REEF; DATA SET; HYDRODYNAMICS; PH; RENEWABLE RESOURCE; SATELLITE IMAGERY; SPATIAL DISTRIBUTION; SURFACE WATER; TWO-DIMENSIONAL MODELING; WAVE ENERGY;

AUSTRALIA; CORAL SEA; GREAT BARRIER REEF; LIZARD ISLAND; PACIFIC OCEAN; QUEENSLAND;

ALGAE; ANTHOZOA; SQUAMATA;

EID: 84888045338     PISSN: 07224028     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00338-013-1074-5     Document Type: Article

References (71)

1. Andréfouët S, Payri C (2000) Scaling-up carbon and carbonate metabolism of coral reefs using in situ data and remote sensing. Coral Reefs 19: 259-269.
2. Atkinson MJ, Bilger RW (1992) Effects of water velocity on phosphate uptake on coral reefs. Limnol Oceanogr 37: 261-272.
3. Atkinson MJ, Kotler E, Newton P (1994) Effects of water velocity on respiration, calcification and ammonium uptake in a Porites compressa community. Pac Sci 48: 296-303.
4. Beaman RJ (2010) Project 3DGBR: a high-resolution depth model for the Great Barrier Reef and Coral Sea. Cairns, Australia: Marine and Tropical Sciences Research Facility, Project 2. 5i. 1a Final Report, p 13.
5. Bellwood DR (1995a) Carbonate transport and within-reef patterns of bioerosion and sediment release by parrotfishes (family Scaridae) on the Great Barrier Reef. Mar Ecol Prog Ser 117: 127-136.
6. Bellwood DR (1995b) Direct estimate of bioerosion by two parrotfish species, Chlorurus gibbus and C. sordidus, on the Great Barrier Reef. Aust Mar Biol 121: 419-429.
7. Bellwood DR (1996) Production and reworking of sediment by parrotfishes (family Scaridae) on the Great Barrier Reef. Mar Biol 125: 795-800.
8. Booij N, Ris RC, Holthuijsen LH (1999) A third-generation wave model for coastal regions 1. Model description and validation. J Geophys Res 104: 7649-7666.
9. Boucher G, Clavier J, Hily C, Gattuso JP (1998) Contribution of soft-bottoms to the community metabolism (primary production and calcification) of a barrier reef flat (Moorea, French Polynesia). J Exp Mar Biol Ecol 225: 269-283.
10. Brown CJ, Smith SJ, Lawton P, Anderson JT (2011) Benthic habitat mapping: a review of progress towards improved understanding of the spatial ecology of the seafloor using acoustic techniques. Estuar Coast Shelf Sci 92: 502-520.
11. Chisholm JRM (2000) Calcification by crustose coralline algae on the northern Great Barrier Reef, Australia. Limnol Oceanogr 45: 1476-1484.
12. CSIRO & Bureau of Meteorology (2007) Climate change in Australia: Technical Report. Available for download at: http://www. climatechangeinaustralia. gov. au/technical_report. php.
13. Daly M (2005) Wave energy and shoreline response on a fringing reef complex, Lizard Island, Qld, Australia. B Env Sci thesis, University of New South Wales, p105.
14. Davis WM (1976) The coral reef problem. American Geographical Society, New York.
15. Dean RG, Dalrymple RA (1991) Water wave mechanics for engineers and scientists. World Scientific, Singapore.
16. Done T (2011) Coral reef, definition. In: Hopley D (ed) Encyclopedia of modern coral reefs: structure form and process. Springer, Berlin, pp 261-267.
17. Doo S, Hamylton S, Byrne M (2013) Reef scale assessment of Large Benthic Foraminifera populations on One Tree reef and future carbonate production potential in a warming ocean. Zool Stud 51: 1-18.
18. Ford MR (2010) Sedimentological implications of durability and physical taphonomic processes on a fringing reef, Lizard Island, Australia. PhD Thesis, University of Auckland.
19. Fortin M, Dale MRT (2005) Spatial analysis: a guide for ecologists. Cambridge University Press, Cambridge.
20. Freile D, Hillis L (1997) Carbonate productivity by Halimeda incrassata in a land proximal lagoon, Pico Feo, San Blas, Panama. Proc 8th Int Coral Reef Symp 1: 767-772.
21. Geister J (1977) The influence of wave exposure on the ecological zonation of Caribbean coral reefs. Proc 3rd Int Coral Reef Symp 2: 23-29.
22. Guinan J, Grehan AJ, Dolan MFJ, Brown C (2009) Quantifying relationships between video observations of cold-water coral cover and seafloor features in rockall trough, west of Ireland. Mar Ecol Prog Ser 375: 125-138.
23. Guisan A, Zimmermann NE (2000) Predictive habitat distribution models in ecology. Ecol Model 135: 147-186.
24. Haining R (2003) Spatial data analysis: theory and practice. Cambridge University Press, Cambridge.
25. Hamylton S (2011) The use of remote sensing and linear wave theory to model local wave energy around Alphonse Atoll, Seychelles. Estuar Coast Shelf Sci 95: 349-358.
26. Hamylton S, Spencer T, Hagan A (2012) Spatial modelling of benthic cover using remote sensing data in the Aldabra lagoon, western Indian Ocean. Mar Ecol Prog Ser 460: 35-47.
27. Harney JN, Fletcher CH (2003) A budget of carbonate framework and sediment production, Kailua Bay, Oahu, Hawaii. J Sediment Res 73: 856-868.
28. Hart DE, Kench PS (2007) Carbonate production of an emergent reef platform, Warraber Island, Torres Strait, Australia. Coral Reefs 26: 53-68.
29. Hearn CJ, Atkinson MJ, Falter JL (2001) A physical derivation of nutrient-uptake rates in coral reefs: effects of roughness and waves. Coral Reefs 20: 347-356.
30. Holthuijsen LH (2007) Waves in oceanic and coastal waters. Cambridge University Press, Cambridge.
31. Holthuijsen LH, Herman A, Booij N (2003) Phase-decoupled refraction-diffraction for spectral wave models. Coast Eng 49: 291-305.
32. Hopley D, Smithers S, Parnell K (2007) The geomorphology of the Great Barrier Reef: development, diversity and change. Cambridge University Press, Cambridge.
33. Hubbard DK, Miller AI, Scaturo D (1990) Production and cycling of calcium carbonate in a shelf-edge reef system (St. Croix, U. S. Virgin Islands); applications to the nature of reef systems in the fossil record. J Sediment Res 60: 335-342.
34. Hughes TP (1999) Off-reef transport of coral fragments at Lizard Island, Australia. Mar Geol 157: 1-6.
35. Kench P (2011) Eco-morphodynamics. In: Hopley D (ed) Encyclopedia of modern coral reefs: structure form and process. Springer, Berlin, pp 359-365.
36. Kench P, Perry C, Spencer T (2009) Coral reefs. In: Slaymaker O, Spencer T, Embleton-Hamann C (eds) Geomorphology and global environmental change. Cambridge University Press, Cambridge, pp 180-213.
37. Kendall M, Gibbons JD (1990) Rank correlation methods. Elsevier, New York.
38. Kiene WS, Hutchings PA (1992) Long-term bioerosion of experimental coral substrates from Lizard Island, Great Barrier Reef. Proc 7th Int Coral Reef Symp 1: 397-403.
39. Kiene WS, Hutchings PA (1994) Bioerosion experiments at Lizard Island, Great Barrier Reef. Coral Reefs 13: 91-98.
40. Kinsey DW (1985) Metabolism, calcification and carbon production. Proc 5th Int Coral Reef Symp 1: 527-539.
41. Kinsey DW, Davies PJ (1975) Coral reef growth- a model based on morphological and metabolic studies. Aust J Mar Sci 7: 10-14.
42. Kinzie RA, Buddemeier RW (1996) Reefs happen. Global Change Biol 2: 479-494.
43. Kleypas JA, Langdon C (2006) Coral reefs and changing seawater carbonate chemistry. Coast Estuar Stud 61: 73-110.
44. Leon JX, Woodroffe CD (2013) Morphological characterisation of reef types in Torres Strait and an assessment of their carbonate production. Mar Geol 338: 64-75.
45. Leon J, Phinn SR, Hamylton S, Saunders M (2013) Filling the 'white ribbon': a seamless multisource digital elevation/depth model for Lizard Island, northern Great Barrier Reef. Int J Remote Sens 34: 6337-6354.
46. LIMER Expedition Team (1975) Metabolic processes of coral reef communities at Lizard Island, Queensland. Search 7: 463-468.
47. Lugo-Fernandez CJ, Roberts H (2011) Reef front wave energy. In: Hopley D (ed) Encyclopedia of modern coral reefs: Structure form and process. Springer, Berlin, pp 876-881.
48. Lundblad E, Wright D, Miller J, Larkin E, Rinehart R, Naar D, Donahue B, Anderson S, Battista T (2006) A benthic terrain classification scheme for American Samoa. Mar Geod 29: 89-111.
49. Macintyre IG, Glynn PW, Steneck RS (2001) A classic Caribbean algal ridge, Holandés Cays, Panamá: an algal coated storm deposit. Coral Reefs 20: 95-105.
50. Mallela J, Perry C (2007) Calcium carbonate budgets for two coral reefs affected by terrestrial runoff regimes, Rio Bueno, Jamaica. Coral Reefs 26: 129-145.
51. Massel SR (2005) Ocean surface waves: their physics and prediction. Advanced Series on Ocean Engineering, World Scientific.
52. Montaggioni LF, Braithwaite CJR (2009) Quaternary coral reef systems: history, development, processes and controlling factors. Elsevier, Amsterdam.
53. Moses CS, Andréfouët S, Kranenburg CJ, Muller-Karger FE (2009) Regional estimates of reef carbonate dynamics and productivity Using Landsat 7 ETM+, and potential impacts from ocean acidification. Mar Ecol Prog Ser 380: 103-115.
54. Nelleman C, Cameron RD (1996) Effects of petroleum development on calving preferences of calving Caribou. Arctic 49: 22-28.
55. Nelson VM (1992) Patterns of cover, diversity and spatial arrangement of benthos at Lizard Island, Great Barrier Reef. Proc 7th Int Coral Reef Symp 1: 827-832.
56. Nielsen P (2009) Coastal and estuarine processes. World Scientific, Singapore.
57. Perry CT, Edinger EN, Kench PS, Murphy GN, Smithers SG, Steneck RS, Mumby PJ (2012) Estimating rates of biologically driven coral reef framework production and erosion: a new census-based carbonate budget methodology and applications to the reefs of Bonaire. Coral Reefs 12: 1-16.
58. Pichon M, Morrissey J (1981) Benthic zonation and community structure of South Island reef, Lizard Island, Great Barrier Reef. Bull Mar Sci 31: 581-593.
59. Rees SA, Opdyke BN, Wilson PA, Keith Fifield L, Levchenko V (2006) Holocene evolution of the granite based Lizard Island and MacGillivray Reef systems, Northern Great Barrier Reef. Coral Reefs 25: 555-565.
60. Ris RC, Holthuijsen LH, Booij N (1999) A third-generation wave model for coastal regions 2. verification. J Geophys Res 104: 7667-7681.
61. Shinn EA (1966) Coral growth-rate, an environmental indicator. J Paleontol 40: 233-240.
62. Smirnov O, Anselin L (2001) Fast maximum likelihood estimation of very large spatial autoregressive models: a characteristic polynomial approach. Comput Stat Data Anal 35: 301-319.
63. Smith SV, Kinsey DW (1976) Calcium carbonate production, coral reef growth, and sea level change. Science 194: 937-939.
64. Smith DF, Wiebe WJ (1977) Rates of carbon fixation, organic carbon release and translocation in a reef-building foraminifer, Marginopora vevtebvalis. Austral J Mar Freshw Res 28: 311-319.
65. Trillobet A, Golubic S (2005) Cross-shelf differences in the pattern and pace of bioerosion of experimental carbonate substrates exposed for 3 years on the northern Great Barrier Reef, Australia. Coral Reefs 24: 422-434.
66. van der Westhuysen AJ (2010) Modeling of depth-induced wave breaking under finite depth wave growth conditions. J Geophys Res 115(C01008).
67. Vecsei A (2001) Fore-reef carbonate production: development of a regional census-based method and first estimates. Palaeogeogr Palaeoclimatol Palaeoecol 175: 185-200.
68. Vecsei A (2004) A new estimate of global reefal carbonate production including the fore-reefs. Global Planet Change 43: 1-18.
69. Veron JEN (2011) Corals: biology, skeletal deposition, and reef-building. In: Hopley D (ed) Encyclopedia of modern coral reefs: Structure form and process. Springer, Berlin, pp 275-281.
70. Yamano H, Miyajima T, Koike I (2000) Importance of foraminifera for the formation and maintenance of a coral sand cay: Green Island, Australia. Coral Reefs 19: 51-58.
71. Zijlema M, van der Westhuysen AJ (2005) On convergence behaviour and numerical accuracy in stationary SWAN simulations of nearshore wind wave spectra. Coast Eng 52: 237-256.