Detection of specific protein-protein interactions in nanocages by engineering bipartite FlAsH binding sites

Journal of the American Chemical Society

Volumn 135, Issue 44, 2013, Pages 16618-16624

  Cornell, Thomas A ^a,b   Fu, Jing ^b   Newland, Stephanie H ^c   Orner, Brendan P ^a  

^a KING'S COLLEGE LONDON   (United Kingdom)

^b Nanyang Technological University   (Singapore)

^c UNIVERSITY OF SOUTHAMPTON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL FUNCTIONS; CAGE-LIKE STRUCTURES; HIGH THROUGHPUT SCREENING; INORGANIC NANOPARTICLE; IRON-STORAGE PROTEIN; MATERIALS CHEMISTRY; PROOF OF PRINCIPLES; PROTEIN-PROTEIN INTERACTIONS;

AMINO ACIDS; BINDING SITES; DRUG PRODUCTS; ESCHERICHIA COLI; MACHINERY; OLIGOMERIZATION; OLIGOMERS; OPTIMIZATION;

PROTEINS;

CYSTEINE; DNA BINDING PROTEIN; IRON STORAGE PROTEIN; METALLOPROTEIN; MONOMER; NANOCAGE; NANOPARTICLE; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CELL LYSATE; CIRCULAR DICHROISM; CONTROLLED STUDY; ELECTROSPRAY MASS SPECTROMETRY; ESCHERICHIA COLI; GEL PERMEATION CHROMATOGRAPHY; HIGH THROUGHPUT SCREENING; IRON STORAGE; MOLECULAR LIBRARY; NONHUMAN; OLIGOMERIZATION; PH; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN DENATURATION; PROTEIN ENGINEERING; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; TRANSMISSION ELECTRON MICROSCOPY;

BINDING SITES; FLUORESCENCE; FLUORESCENT DYES; HYDROGEN-ION CONCENTRATION; MODELS, MOLECULAR; NANOSTRUCTURES; PROTEIN BINDING; PROTEIN ENGINEERING; PROTEINS;

EID: 84887694107     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja4085034     Document Type: Article

References (43)

1. Grueninger, D.; Treiber, N.; Ziegler, M. O. P.; Koetter, J. W. A.; Schulze, M.-S.; Schulz, G. E. Science 2008, 319, 206-209
2. Fan, R.; Boyle, A. L.; Cheong, V. V.; Ng, S. L.; Orner, B. P. Biochemistry 2009, 48, 5623-5630
3. Walter, S.; Buchner, J. Angew. Chem., Int. Ed. 2002, 41, 1098-1113
4. Aisen, P.; Listowsky, I. Annu. Rev. Biochem. 1980, 49, 357-393
5. Kis, K.; Volk, R.; Bacher, A. Biochemistry 1995, 34, 2883-2892
6. Homa, F. L.; Brown, J. C. Rev. Med. Virol. 1997, 7, 107-122
7. Fan, R.; Chew, S. W.; Cheong, V. V.; Orner, B. P. Small 2010, 6, 1483-1487
8. Zhang, L.; Swift, J.; Butts, C. A.; Yerubandi, V.; Dmochowski, I. J. J. Inorg. Biochem. 2007, 101, 1719-1729
9. Ueno, T.; Suzuki, M.; Goto, T.; Matsumoto, T.; Nagayama, K.; Watanabe, Y. Angew. Chem., Int. Ed 2004, 43, 2527-2530
10. Kramer, R. M.; Li, C.; Carter, D. C.; Stone, M. O.; Naik, R. R. J. Am. Chem. Soc. 2004, 126, 13282-13286
11. Woersdoerfer, B.; Woycechowsky, K. J.; Hilvert, D. Science 2011, 331, 589-592
12. Keyes, J. D.; Hilton, R. J.; Farrer, J.; Watt, R. K. J. Nanopart. Res. 2011, 13, 2563-2575
13. Qiu, H. J.; Dong, X. C.; Sana, B.; Peng, T.; Paramelle, D.; Chen, P.; Lim, S. ACS Appl. Mater. Interfaces 2013, 5, 782-787
14. Grant, R. A.; Filman, D. J.; Finkel, S. E.; Kolter, R.; Hogle, J. M. Nat. Struct. Biol. 1998, 5, 294-303
15. Ardejani, M. S.; Li, N. X.; Orner, B. P. Biochemistry 2011, 50, 4029-4037
16. Ardejani, M. S.; Chok, X. L.; Foo, C. J.; Orner, B. P. Chem. Commun. 2013, 49, 3528-3530
17. Fletcher, J. M.; Harniman, R. L.; Barnes, F. R. H.; Boyle, A. L.; Collins, A.; Mantell, J.; Sharp, T. H.; Antognozzi, M.; Booth, P. J.; Linden, N.; Miles, M. J.; Sessions, R. B.; Verkade, P.; Woolfson, D. N. Science 2013, 340, 595-599
18. Woolfson, D. N. Adv. Protein Chem. 2005, 70, 79-112
19. Zhang, Y.; Raudah, S.; Teo, H.; Teo, G. W. S.; Fan, R.; Sun, X.; Orner, B. P. J. Biol. Chem. 2010, 285, 12078-12086
20. Zhang, Y.; Fu, J.; Chee, S. Y.; Ang, E. X. W.; Orner, B. P. Protein Sci. 2011, 20, 1907-1917
21. Haile, D. J. Am. J. Med. Sci. 1999, 318, 230-240
22. Harrison, P. M.; Arosio, P. Biochim. Biophys. Acta, Bioenerg. 1996, 1275, 161-203
23. Hintze, K. J.; Theil, E. C. Cell. Mol. Life Sci. 2006, 63, 591-600
24. Leipuviene, R.; Theil, E. C. Cell. Mol. Life Sci. 2007, 64, 2945-2955
25. Theil, E. C. Annu. Rev. Biochem. 1987, 56, 289-315
26. Ilari, A.; Stefanini, S.; Chiancone, E.; Tsernoglou, D. Nat. Struct. Biol. 2000, 7, 38-43
27. Zhang, Y.; Orner, B. P. Int. J. Mol. Sci. 2011, 12, 5406-5421
28. Griffin, B. A.; Adams, S. R.; Tsien, R. Y. Science 1998, 281, 269-272
29. Griffin, B. A.; Adams, S. R.; Jones, J.; Tsien, R. Y. Methods Enzymol. 2000, 327, 565-578
30. Tsien, R. Y. Annu. Rev. Biochem. 1998, 67, 509-544
31. Adams, S. R.; Campbell, R. E.; Gross, L. A.; Martin, B. R.; Walkup, G. K.; Yao, Y.; Llopis, J.; Tsien, R. Y. J. Am. Chem. Soc. 2002, 124, 6063-6076
32. Ignatova, Z.; Gierasch, L. M. Proc. Natl. Acad. Sci. U. S. A. 2004, 101, 523-528
33. Ray-Saha, S.; Schepartz, A. ChemBioChem 2010, 11, 2089-2091
34. Scheck, R. A.; Schepartz, A. Acc. Chem. Res. 2011, 44, 654-665
35. Madani, F.; Lind, J.; Damberg, P.; Adams, S. R.; Tsien, R. Y.; Graslund, A. O. J. Am. Chem. Soc. 2009, 131, 4613-5
36. Luedtke, N. W.; Dexter, R. J.; Fried, D. B.; Schepartz, A. Nat. Chem. Biol. 2007, 3, 779-784
37. Goodman, J. L.; Fried, D. B.; Schepartz, A. ChemBioChem 2009, 10, 1644-1647
38. Scheck, R. A.; Lowder, M. A.; Appelbaum, J. S.; Schepartz, A. ACS Chem. Biol. 2012, 7, 1367-1376
39. Enninga, J.; Mounier, J.; Sansonetti, P.; Van Nhieu, G. T. Nat. Methods 2005, 2, 959-965
40. Schneider, C. A.; Rasband, W. S.; Eliceiri, K. W. Nat. Methods 2012, 9, 671-675
41. Kelly, S. M.; Jess, T. J.; Price, N. C. Biochim. Biophys. Acta, Proteins Proteomics 2005, 1751, 119-139
42. Greenfield, N. J. Nat. Protoc. 2006, 1, 2876-2890
43. Pace, C. N. Methods Enzymol. 1986, 131, 266-80