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Volumn 14, Issue 1, 2013, Pages

Genomes of "Spiribacter", a streamlined, successful halophilic bacterium

Author keywords

Halophilic bacteria; Hypersaline; Moderate halophile; Saltern; Spiribacter; Xanthorhodopsin

Indexed keywords

DNA; RHODOPSIN; UNCLASSIFIED DRUG; XANTHORHODOPSIN;

EID: 84887344480     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-787     Document Type: Article
Times cited : (43)

References (69)
  • 1
    • 0021779934 scopus 로고
    • Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats
    • 10.1146/annurev.mi.39.100185.001541, 3904603
    • Staley JT, Konopka A. Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annu Rev Microbiol 1985, 39:321-346. 10.1146/annurev.mi.39.100185.001541, 3904603.
    • (1985) Annu Rev Microbiol , vol.39 , pp. 321-346
    • Staley, J.T.1    Konopka, A.2
  • 4
    • 84856742115 scopus 로고    scopus 로고
    • Breaking a paradigm: cosmopolitan and abundant freshwater actinobacteria are low GC
    • 10.1111/j.1758-2229.2011.00274.x, 23757226
    • Ghai R, McMahon KD, Rodriguez-Valera F. Breaking a paradigm: cosmopolitan and abundant freshwater actinobacteria are low GC. Environ Microbiol Rep 2012, 4:29-35. 10.1111/j.1758-2229.2011.00274.x, 23757226.
    • (2012) Environ Microbiol Rep , vol.4 , pp. 29-35
    • Ghai, R.1    McMahon, K.D.2    Rodriguez-Valera, F.3
  • 5
    • 84883136008 scopus 로고    scopus 로고
    • Metagenomics uncovers a new group of low GC and ultra-small marine actinobacteria
    • 3747508, 23959135
    • Ghai R, Mizuno CM, Picazo A, Camacho A, Rodriguez-Valera F. Metagenomics uncovers a new group of low GC and ultra-small marine actinobacteria. Sci Rep 2013, 3:2471. 3747508, 23959135.
    • (2013) Sci Rep , vol.3 , pp. 2471
    • Ghai, R.1    Mizuno, C.M.2    Picazo, A.3    Camacho, A.4    Rodriguez-Valera, F.5
  • 6
    • 84879678051 scopus 로고    scopus 로고
    • Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
    • Albertsen M, Hugenholtz P, Skarshewski A, Nielsen KL, Tyson GW, Nielsen PH. Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes. Nat Biotech 2013, 31:533-538.
    • (2013) Nat Biotech , vol.31 , pp. 533-538
    • Albertsen, M.1    Hugenholtz, P.2    Skarshewski, A.3    Nielsen, K.L.4    Tyson, G.W.5    Nielsen, P.H.6
  • 8
    • 0030062396 scopus 로고
    • Sequencing of bacterial and archaeal 16S rRNA genes directly amplified from a hypersaline environment
    • Benlloch S, Martínez-Murcia AJ, Rodríguez-Valera F. Sequencing of bacterial and archaeal 16S rRNA genes directly amplified from a hypersaline environment. Syst Appl Microbiol 1995, 18:574-581.
    • (1995) Syst Appl Microbiol , vol.18 , pp. 574-581
    • Benlloch, S.1    Martínez-Murcia, A.J.2    Rodríguez-Valera, F.3
  • 10
    • 0033301308 scopus 로고    scopus 로고
    • Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds
    • 10.1046/j.1462-2920.1999.00065.x, 11207773
    • Antón J, Llobet-Brossa E, Rodríguez-Valera F, Amann R. Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds. Environ Microbiol 1999, 1:517-523. 10.1046/j.1462-2920.1999.00065.x, 11207773.
    • (1999) Environ Microbiol , vol.1 , pp. 517-523
    • Antón, J.1    Llobet-Brossa, E.2    Rodríguez-Valera, F.3    Amann, R.4
  • 11
    • 10044226982 scopus 로고    scopus 로고
    • Isolation and cultivation of Walsby's square archaeon
    • 10.1111/j.1462-2920.2004.00692.x, 15560825
    • Bolhuis H, Poele EM, Rodriguez-Valera F. Isolation and cultivation of Walsby's square archaeon. Environ Microbiol 2004, 6:1287-1291. 10.1111/j.1462-2920.2004.00692.x, 15560825.
    • (2004) Environ Microbiol , vol.6 , pp. 1287-1291
    • Bolhuis, H.1    Poele, E.M.2    Rodriguez-Valera, F.3
  • 14
    • 84876310485 scopus 로고    scopus 로고
    • Assembly-driven community genomics of a hypersaline microbial ecosystem
    • 10.1371/journal.pone.0061692, 3630111, 23637883
    • Podell S, Ugalde JA, Narasingarao P, Banfield JF, Heidelberg KB, Allen EE. Assembly-driven community genomics of a hypersaline microbial ecosystem. PLoS ONE 2013, 8:e61692. 10.1371/journal.pone.0061692, 3630111, 23637883.
    • (2013) PLoS ONE , vol.8
    • Podell, S.1    Ugalde, J.A.2    Narasingarao, P.3    Banfield, J.F.4    Heidelberg, K.B.5    Allen, E.E.6
  • 15
    • 50649122735 scopus 로고    scopus 로고
    • Nanoarchaeal 16S rRNA gene sequences are widely dispersed in hyperthermophilic and mesophilic halophilic environments
    • 10.1007/s00792-008-0170-x, 18553053
    • Casanueva A, Galada N, Baker G, Grant W, Heaphy S, Jones B, Yanhe M, Ventosa A, Blamey J, Cowan D. Nanoarchaeal 16S rRNA gene sequences are widely dispersed in hyperthermophilic and mesophilic halophilic environments. Extremophiles 2008, 12:651-656. 10.1007/s00792-008-0170-x, 18553053.
    • (2008) Extremophiles , vol.12 , pp. 651-656
    • Casanueva, A.1    Galada, N.2    Baker, G.3    Grant, W.4    Heaphy, S.5    Jones, B.6    Yanhe, M.7    Ventosa, A.8    Blamey, J.9    Cowan, D.10
  • 16
    • 0031810562 scopus 로고    scopus 로고
    • Biology of moderately halophilic aerobic bacteria
    • 98923, 9618450
    • Ventosa A, Nieto JJ, Oren A. Biology of moderately halophilic aerobic bacteria. Microbiol Mol Biol Rev 1998, 62:504-544. 98923, 9618450.
    • (1998) Microbiol Mol Biol Rev , vol.62 , pp. 504-544
    • Ventosa, A.1    Nieto, J.J.2    Oren, A.3
  • 17
    • 35648941632 scopus 로고    scopus 로고
    • Phylogeny and evolution of the family Ectothiorhodospiraceae based on comparison of 16S rRNA, cbbL and nifH gene sequences
    • 10.1099/ijs.0.65041-0, 17911316
    • Tourova TP, Spiridonova EM, Berg IA, Slobodova NV, Boulygina ES, Sorokin DY. Phylogeny and evolution of the family Ectothiorhodospiraceae based on comparison of 16S rRNA, cbbL and nifH gene sequences. Int J Syst Evol Microbiol 2007, 57:2387-2398. 10.1099/ijs.0.65041-0, 17911316.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2387-2398
    • Tourova, T.P.1    Spiridonova, E.M.2    Berg, I.A.3    Slobodova, N.V.4    Boulygina, E.S.5    Sorokin, D.Y.6
  • 18
    • 0036794790 scopus 로고    scopus 로고
    • Anaerobic oxidation of arsenite in mono lake water and by a facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1
    • 10.1128/AEM.68.10.4795-4802.2002, 126446, 12324322
    • Oremland RS, Hoeft SE, Santini JM, Bano N, Hollibaugh RA, Hollibaugh JT. Anaerobic oxidation of arsenite in mono lake water and by a facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1. Appl Environ Microbiol 2002, 68:4795-4802. 10.1128/AEM.68.10.4795-4802.2002, 126446, 12324322.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 4795-4802
    • Oremland, R.S.1    Hoeft, S.E.2    Santini, J.M.3    Bano, N.4    Hollibaugh, R.A.5    Hollibaugh, J.T.6
  • 19
    • 0027166039 scopus 로고
    • Arhodomonas aquaeolei gen. nov., sp. nov., an aerobic, halophilic bacterium isolated from a Subterranean Brine
    • 10.1099/00207713-43-3-514, 8347510
    • Adkins JP, Madigan MT, Mandelco L, Woese CR, Tanner RS. Arhodomonas aquaeolei gen. nov., sp. nov., an aerobic, halophilic bacterium isolated from a Subterranean Brine. Int J Syst Bacteriol 1993, 43:514-520. 10.1099/00207713-43-3-514, 8347510.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 514-520
    • Adkins, J.P.1    Madigan, M.T.2    Mandelco, L.3    Woese, C.R.4    Tanner, R.S.5
  • 20
    • 0000301525 scopus 로고
    • Characteristics of two marine nitrite oxidizing bacteria, Nitrospina gracilis nov. gen. nov. sp. and Nitrococcus mobilis nov. gen. nov. sp
    • Watson S, Waterbury J. Characteristics of two marine nitrite oxidizing bacteria, Nitrospina gracilis nov. gen. nov. sp. and Nitrococcus mobilis nov. gen. nov. sp. Archiv Mikrobiol 1971, 77:203-230.
    • (1971) Archiv Mikrobiol , vol.77 , pp. 203-230
    • Watson, S.1    Waterbury, J.2
  • 21
    • 14044262978 scopus 로고    scopus 로고
    • Genomic insights that advance the species definition for prokaryotes
    • 10.1073/pnas.0409727102, 549018, 15701695
    • Konstantinidis KT, Tiedje JM. Genomic insights that advance the species definition for prokaryotes. Proc Natl Acad Sci U S A 2005, 102:2567-2572. 10.1073/pnas.0409727102, 549018, 15701695.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 2567-2572
    • Konstantinidis, K.T.1    Tiedje, J.M.2
  • 25
    • 38049032445 scopus 로고    scopus 로고
    • Interrelationships between Dunaliella and halophilic prokaryotes in saltern crystallizer ponds
    • 10.1007/s00792-006-0053-y, 17186316
    • Elevi Bardavid R, Khristo P, Oren A. Interrelationships between Dunaliella and halophilic prokaryotes in saltern crystallizer ponds. Extremophiles 2008, 12:5-14. 10.1007/s00792-006-0053-y, 17186316.
    • (2008) Extremophiles , vol.12 , pp. 5-14
    • Elevi Bardavid, R.1    Khristo, P.2    Oren, A.3
  • 26
    • 67649389656 scopus 로고    scopus 로고
    • Glycerol-mediated repression of glucose metabolism and glycerol kinase as the sole route of glycerol catabolism in the haloarchaeon Haloferax volcanii
    • 10.1128/JB.00131-09, 2698487, 19411322
    • Sherwood KE, Cano DJ, Maupin-Furlow JA. Glycerol-mediated repression of glucose metabolism and glycerol kinase as the sole route of glycerol catabolism in the haloarchaeon Haloferax volcanii. J Bacteriol 2009, 191:4307-4315. 10.1128/JB.00131-09, 2698487, 19411322.
    • (2009) J Bacteriol , vol.191 , pp. 4307-4315
    • Sherwood, K.E.1    Cano, D.J.2    Maupin-Furlow, J.A.3
  • 27
    • 0035702148 scopus 로고    scopus 로고
    • Bacterial phosphotransferase system (PTS) in carbohydrate uptake and control of carbon metabolism
    • Kotrba P, Inui M, Yukawa H. Bacterial phosphotransferase system (PTS) in carbohydrate uptake and control of carbon metabolism. J Biosci Bioeng 2001, 92:502-517.
    • (2001) J Biosci Bioeng , vol.92 , pp. 502-517
    • Kotrba, P.1    Inui, M.2    Yukawa, H.3
  • 28
    • 33747334086 scopus 로고    scopus 로고
    • The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity
    • 10.1186/1471-2164-7-169, 1544339, 16820047
    • Bolhuis H, Palm P, Wende A, Falb M, Rampp M, Rodriguez-Valera F, Pfeiffer F, Oesterhelt D. The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity. BMC Genomics 2006, 7:169. 10.1186/1471-2164-7-169, 1544339, 16820047.
    • (2006) BMC Genomics , vol.7 , pp. 169
    • Bolhuis, H.1    Palm, P.2    Wende, A.3    Falb, M.4    Rampp, M.5    Rodriguez-Valera, F.6    Pfeiffer, F.7    Oesterhelt, D.8
  • 29
    • 0022974540 scopus 로고
    • Bacterial sarcosine oxidase: comparison of two multisubunit enzymes containing both covalent and noncovalent flavin
    • 10.1021/bi00368a034, 3790506
    • Kvalnes-Krick K, Jorns MS. Bacterial sarcosine oxidase: comparison of two multisubunit enzymes containing both covalent and noncovalent flavin. Biochemistry 1986, 25:6061-6069. 10.1021/bi00368a034, 3790506.
    • (1986) Biochemistry , vol.25 , pp. 6061-6069
    • Kvalnes-Krick, K.1    Jorns, M.S.2
  • 30
    • 1242269905 scopus 로고    scopus 로고
    • Genomics of the ccoNOQP-encoded cbb 3 oxidase complex in bacteria
    • 10.1007/s00203-003-0641-5, 14714103
    • Cosseau C, Batut J. Genomics of the ccoNOQP-encoded cbb 3 oxidase complex in bacteria. Arch Microbiol 2004, 181:89-96. 10.1007/s00203-003-0641-5, 14714103.
    • (2004) Arch Microbiol , vol.181 , pp. 89-96
    • Cosseau, C.1    Batut, J.2
  • 31
    • 33750957249 scopus 로고    scopus 로고
    • Genome-enabled analysis of the utilization of taurine as sole source of carbon or of nitrogen by Rhodobacter sphaeroides 2.4.1
    • 10.1099/mic.0.29195-0, 17074891
    • Denger K, Smits THM, Cook AM. Genome-enabled analysis of the utilization of taurine as sole source of carbon or of nitrogen by Rhodobacter sphaeroides 2.4.1. Microbiology 2006, 152:3197-3206. 10.1099/mic.0.29195-0, 17074891.
    • (2006) Microbiology , vol.152 , pp. 3197-3206
    • Denger, K.1    Smits, T.H.M.2    Cook, A.M.3
  • 32
    • 84875038227 scopus 로고    scopus 로고
    • The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment
    • 3266647, 22303297
    • Villarreal-Chiu JF, Quinn JP, McGrath JW. The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment. Front Microbiol 2012, 3:19. 3266647, 22303297.
    • (2012) Front Microbiol , vol.3 , pp. 19
    • Villarreal-Chiu, J.F.1    Quinn, J.P.2    McGrath, J.W.3
  • 33
    • 0027385183 scopus 로고
    • Regulation of the heat-shock response in bacteria
    • 10.1146/annurev.mi.47.100193.001541, 7504905
    • Yura T, Nagai H, Mori H. Regulation of the heat-shock response in bacteria. Annu Rev Microbiol 1993, 47:321-350. 10.1146/annurev.mi.47.100193.001541, 7504905.
    • (1993) Annu Rev Microbiol , vol.47 , pp. 321-350
    • Yura, T.1    Nagai, H.2    Mori, H.3
  • 34
    • 0024799191 scopus 로고
    • Prokaryotic signal transduction mediated by sensor and regulator protein pairs
    • 10.1146/annurev.ge.23.120189.001523, 2694934
    • Albright LM, Huala E, Ausubel FM. Prokaryotic signal transduction mediated by sensor and regulator protein pairs. Annu Rev Genet 1989, 23:311-336. 10.1146/annurev.ge.23.120189.001523, 2694934.
    • (1989) Annu Rev Genet , vol.23 , pp. 311-336
    • Albright, L.M.1    Huala, E.2    Ausubel, F.M.3
  • 35
    • 0003338719 scopus 로고    scopus 로고
    • Phosphorus assimilation and control of the phosphate regulon
    • Washington, D. C: ASM Press, Neidhardt FC, Curtiss RIII, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE
    • Wanner BL. Phosphorus assimilation and control of the phosphate regulon. Escherichia coli and Salmonella typhimurium: cellular and molecular biology 1996, 1357-1381. Washington, D. C: ASM Press, Neidhardt FC, Curtiss RIII, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE.
    • (1996) Escherichia coli and Salmonella typhimurium: cellular and molecular biology , pp. 1357-1381
    • Wanner, B.L.1
  • 36
    • 35448984675 scopus 로고    scopus 로고
    • Nitrogen regulation in bacteria and archaea
    • 10.1146/annurev.micro.61.080706.093409, 17506680
    • Leigh JA, Dodsworth JA. Nitrogen regulation in bacteria and archaea. Annu Rev Microbiol 2007, 61:349-377. 10.1146/annurev.micro.61.080706.093409, 17506680.
    • (2007) Annu Rev Microbiol , vol.61 , pp. 349-377
    • Leigh, J.A.1    Dodsworth, J.A.2
  • 37
    • 54349101579 scopus 로고    scopus 로고
    • Osmoadaptation mechanisms in prokaryotes: distribution of compatible solutes
    • Empadinhas N, da Costa M. Osmoadaptation mechanisms in prokaryotes: distribution of compatible solutes. Int Microbiol 2008, 11:151-161.
    • (2008) Int Microbiol , vol.11 , pp. 151-161
    • Empadinhas, N.1    da Costa, M.2
  • 38
    • 44849113111 scopus 로고    scopus 로고
    • Regulation of osmoadaptation in the moderate halophile Halobacillus halophilus: chloride, glutamate and switching osmolyte strategies
    • 10.1186/1746-1448-4-4, 2412884, 18442383
    • Saum S, Muller V. Regulation of osmoadaptation in the moderate halophile Halobacillus halophilus: chloride, glutamate and switching osmolyte strategies. Saline Systems 2008, 4:4. 10.1186/1746-1448-4-4, 2412884, 18442383.
    • (2008) Saline Systems , vol.4 , pp. 4
    • Saum, S.1    Muller, V.2
  • 39
    • 0033965298 scopus 로고    scopus 로고
    • Genes for the synthesis of the osmoprotectant glycine betaine from choline in the moderately halophilic bacterium Halomonas elongata DSM 3043
    • Cánovas D, Vargas C, Kneip S, Morón Ma J, Ventosa A, Bremer E, Nieto JJ. Genes for the synthesis of the osmoprotectant glycine betaine from choline in the moderately halophilic bacterium Halomonas elongata DSM 3043. Microbiology 2000, 146:455-463.
    • (2000) Microbiology , vol.146 , pp. 455-463
    • Cánovas, D.1    Vargas, C.2    Kneip, S.3    Morón Ma, J.4    Ventosa, A.5    Bremer, E.6    Nieto, J.J.7
  • 40
    • 29144439151 scopus 로고    scopus 로고
    • Characterization of the ectoine biosynthesis genes of haloalkalotolerant obligate methanotroph "Methylomicrobium alcaliphilum 20Z"
    • 10.1007/s00203-005-0042-z, 16283251
    • Reshetnikov A, Khmelenina V, Trotsenko Y. Characterization of the ectoine biosynthesis genes of haloalkalotolerant obligate methanotroph "Methylomicrobium alcaliphilum 20Z" Arch Microbiol 2006, 184:286-297. 10.1007/s00203-005-0042-z, 16283251.
    • (2006) Arch Microbiol , vol.184 , pp. 286-297
    • Reshetnikov, A.1    Khmelenina, V.2    Trotsenko, Y.3
  • 41
    • 0032443691 scopus 로고    scopus 로고
    • Characterization of the genes for the biosynthesis of the compatible solute ectoine in the moderately halophilic bacterium Halomonas elongata DSM 3043
    • 10.1016/S0723-2020(98)80060-X, 9924816
    • Cánovas D, Vargas C, Calderón MI, Ventosa A, Nieto JJ. Characterization of the genes for the biosynthesis of the compatible solute ectoine in the moderately halophilic bacterium Halomonas elongata DSM 3043. Syst Appl Microbiol 1998, 21:487-497. 10.1016/S0723-2020(98)80060-X, 9924816.
    • (1998) Syst Appl Microbiol , vol.21 , pp. 487-497
    • Cánovas, D.1    Vargas, C.2    Calderón, M.I.3    Ventosa, A.4    Nieto, J.J.5
  • 42
    • 84865821766 scopus 로고    scopus 로고
    • Acid-shifted isoelectric point profiles of the proteins in a hypersaline microbial mat: an adaptation to life at high salt concentrations?
    • 10.1007/s00792-012-0476-6, 22907126
    • Elevi Bardavid R, Oren A. Acid-shifted isoelectric point profiles of the proteins in a hypersaline microbial mat: an adaptation to life at high salt concentrations?. Extremophiles 2012, 16:787-792. 10.1007/s00792-012-0476-6, 22907126.
    • (2012) Extremophiles , vol.16 , pp. 787-792
    • Elevi Bardavid, R.1    Oren, A.2
  • 43
    • 84872054814 scopus 로고    scopus 로고
    • An extremely halophilic proteobacterium combines a highly acidic proteome with a low cytoplasmic potassium content
    • 10.1074/jbc.M112.420505, 23144460
    • Deole R, Challacombe J, Raiford DW, Hoff WD. An extremely halophilic proteobacterium combines a highly acidic proteome with a low cytoplasmic potassium content. J Biol Chem 2013, 288:581-588. 10.1074/jbc.M112.420505, 23144460.
    • (2013) J Biol Chem , vol.288 , pp. 581-588
    • Deole, R.1    Challacombe, J.2    Raiford, D.W.3    Hoff, W.D.4
  • 44
    • 78649982124 scopus 로고    scopus 로고
    • Tripartite ATP-independent periplasmic (TRAP) transporters in bacteria and archaea
    • 10.1111/j.1574-6976.2010.00236.x, 20584082
    • Mulligan C, Fischer M, Thomas GH. Tripartite ATP-independent periplasmic (TRAP) transporters in bacteria and archaea. FEMS Microbiol Rev 2011, 35:68-86. 10.1111/j.1574-6976.2010.00236.x, 20584082.
    • (2011) FEMS Microbiol Rev , vol.35 , pp. 68-86
    • Mulligan, C.1    Fischer, M.2    Thomas, G.H.3
  • 45
    • 26444578862 scopus 로고    scopus 로고
    • The Mrp system: a giant among monovalent cation/proton antiporters?
    • 10.1007/s00792-005-0451-6, 15980940
    • Swartz T, Ikewada S, Ishikawa O, Ito M, Krulwich T. The Mrp system: a giant among monovalent cation/proton antiporters?. Extremophiles 2005, 9:345-354. 10.1007/s00792-005-0451-6, 15980940.
    • (2005) Extremophiles , vol.9 , pp. 345-354
    • Swartz, T.1    Ikewada, S.2    Ishikawa, O.3    Ito, M.4    Krulwich, T.5
  • 46
    • 0022349278 scopus 로고
    • Regulation of cytoplasmic pH in bacteria
    • 373043, 3912654
    • Brooth IR. Regulation of cytoplasmic pH in bacteria. Microbiol Rev 1985, 49:359-378. 373043, 3912654.
    • (1985) Microbiol Rev , vol.49 , pp. 359-378
    • Brooth, I.R.1
  • 47
    • 0022610802 scopus 로고
    • Osmoregulation by potassium transport in Escherichia coli
    • Epstein W. Osmoregulation by potassium transport in Escherichia coli. FEMS Microbiol Lett 1986, 39:73-78.
    • (1986) FEMS Microbiol Lett , vol.39 , pp. 73-78
    • Epstein, W.1
  • 48
    • 77954678407 scopus 로고    scopus 로고
    • Potassium and sodium transport in non-animal cells: the Trk/Ktr/HKT transporter family
    • 10.1007/s00018-010-0317-7, 20333436
    • Corratgé-Faillie C, Jabnoune M, Zimmermann S, Véry AA, Fizames C, Sentenac H. Potassium and sodium transport in non-animal cells: the Trk/Ktr/HKT transporter family. Cell Mol Life Sci 2010, 67:2511-2532. 10.1007/s00018-010-0317-7, 20333436.
    • (2010) Cell Mol Life Sci , vol.67 , pp. 2511-2532
    • Corratgé-Faillie, C.1    Jabnoune, M.2    Zimmermann, S.3    Véry, A.A.4    Fizames, C.5    Sentenac, H.6
  • 50
    • 84889439782 scopus 로고    scopus 로고
    • Microbial rhodopsins: phylogenetic and functional diversity
    • Weinheim, FRG: Wiley-VCH Verlag GmbH & Co. KGaA
    • Spudich JL, Jung K-H. Microbial rhodopsins: phylogenetic and functional diversity. Handbook of Photosensory Receptors 2005, 1-23. Weinheim, FRG: Wiley-VCH Verlag GmbH & Co. KGaA.
    • (2005) Handbook of Photosensory Receptors , pp. 1-23
    • Spudich, J.L.1    Jung, K.-H.2
  • 51
    • 84877090640 scopus 로고    scopus 로고
    • Poles apart: arctic and antarctic Octadecabacter strains share high genome plasticity and a New type of xanthorhodopsin
    • 10.1371/journal.pone.0063422, 3646047, 23671678
    • Vollmers J, Voget S, Dietrich S, Gollnow K, Smits M, Meyer K, Brinkhoff T, Simon M, Daniel R. Poles apart: arctic and antarctic Octadecabacter strains share high genome plasticity and a New type of xanthorhodopsin. PLoS ONE 2013, 8:e63422. 10.1371/journal.pone.0063422, 3646047, 23671678.
    • (2013) PLoS ONE , vol.8
    • Vollmers, J.1    Voget, S.2    Dietrich, S.3    Gollnow, K.4    Smits, M.5    Meyer, K.6    Brinkhoff, T.7    Simon, M.8    Daniel, R.9
  • 52
    • 84875294543 scopus 로고    scopus 로고
    • Carotenoid biosynthesis and overproduction in Corynebacterium glutamicum
    • 10.1186/1471-2180-12-198, 3598387, 22963379
    • Heider S, Peters-Wendisch P, Wendisch V. Carotenoid biosynthesis and overproduction in Corynebacterium glutamicum. BMC Microbiol 2012, 12:198. 10.1186/1471-2180-12-198, 3598387, 22963379.
    • (2012) BMC Microbiol , vol.12 , pp. 198
    • Heider, S.1    Peters-Wendisch, P.2    Wendisch, V.3
  • 53
    • 62549105255 scopus 로고    scopus 로고
    • MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi
    • 10.1016/j.gene.2009.01.019, 19393167
    • Chen Y, Zhou F, Li G, Xu Y. MUST: a system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi. Gene 2009, 436:1-7. 10.1016/j.gene.2009.01.019, 19393167.
    • (2009) Gene , vol.436 , pp. 1-7
    • Chen, Y.1    Zhou, F.2    Li, G.3    Xu, Y.4
  • 56
    • 84874400864 scopus 로고    scopus 로고
    • Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea
    • 10.1073/pnas.1209119109, 3528564, 23184964
    • Nelson-Sathi S, Dagan T, Landan G, Janssen A, Steel M, McInerney JO, Deppenmeier U, Martin WF. Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea. Proc Natl Acad Sci 2012, 109:20537-20542. 10.1073/pnas.1209119109, 3528564, 23184964.
    • (2012) Proc Natl Acad Sci , vol.109 , pp. 20537-20542
    • Nelson-Sathi, S.1    Dagan, T.2    Landan, G.3    Janssen, A.4    Steel, M.5    McInerney, J.O.6    Deppenmeier, U.7    Martin, W.F.8
  • 58
    • 0026805942 scopus 로고
    • Rapid isolation of genomic DNA from Gram-negative bacteria
    • Neumann B, Pospiech A, Schairer HU. Rapid isolation of genomic DNA from Gram-negative bacteria. Trends Genet 1992, 8:332-333.
    • (1992) Trends Genet , vol.8 , pp. 332-333
    • Neumann, B.1    Pospiech, A.2    Schairer, H.U.3
  • 62
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
    • Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser 1999, 41:95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 63
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European Molecular Biology Open Software Suite
    • 10.1016/S0168-9525(00)02024-2, 10827456
    • Rice P, Longden I, Bleasby A. EMBOSS: The European Molecular Biology Open Software Suite. Trends Genet 2000, 16:276-277. 10.1016/S0168-9525(00)02024-2, 10827456.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 66
    • 33846040629 scopus 로고    scopus 로고
    • TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels
    • 10.1093/nar/gkl925, 1747178, 17135193
    • Ren Q, Chen K, Paulsen IT. TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Res 2007, 35:D274-D279. 10.1093/nar/gkl925, 1747178, 17135193.
    • (2007) Nucleic Acids Res , vol.35
    • Ren, Q.1    Chen, K.2    Paulsen, I.T.3
  • 67
    • 29244447181 scopus 로고    scopus 로고
    • Kalign - an accurate and fast multiple sequence alignment algorithm
    • Lassmann T, Sonnhammer E. Kalign - an accurate and fast multiple sequence alignment algorithm. BMC Bioinforma 2005, 6:298.
    • (2005) BMC Bioinforma , vol.6 , pp. 298
    • Lassmann, T.1    Sonnhammer, E.2
  • 68
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2 - approximately maximum-likelihood trees for large alignments
    • 10.1371/journal.pone.0009490, 2835736, 20224823
    • Price MN, Dehal PS, Arkin AP. FastTree 2 - approximately maximum-likelihood trees for large alignments. PLoS ONE 2010, 5:e9490. 10.1371/journal.pone.0009490, 2835736, 20224823.
    • (2010) PLoS ONE , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 69
    • 72749109806 scopus 로고    scopus 로고
    • Reconstitution of Gloeobacter violaceus rhodopsin with a light-harvesting carotenoid antenna
    • 10.1021/bi901552x, 2795404, 19842712
    • Imasheva ES, Balashov SP, Choi AR, Jung K-H, Lanyi JK. Reconstitution of Gloeobacter violaceus rhodopsin with a light-harvesting carotenoid antenna. Biochemistry 2009, 48:10948-10955. 10.1021/bi901552x, 2795404, 19842712.
    • (2009) Biochemistry , vol.48 , pp. 10948-10955
    • Imasheva, E.S.1    Balashov, S.P.2    Choi, A.R.3    Jung, K.-H.4    Lanyi, J.K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.