-
1
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman H, Lawrence JG, Groisman EA, (2000) Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304 10.1038/35012500 [doi].
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
2
-
-
23944506044
-
Mobile genetic elements: the agents of open source evolution
-
Frost LS, Leplae R, Summers AO, Toussaint A, (2005) Mobile genetic elements: the agents of open source evolution. Nat Rev Micobiol 3: 722-732.
-
(2005)
Nat Rev Micobiol
, vol.3
, pp. 722-732
-
-
Frost, L.S.1
Leplae, R.2
Summers, A.O.3
Toussaint, A.4
-
3
-
-
23944475626
-
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
-
Thomas CM, Nielsen KM, (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3: 711-721 nrmicro1234 [pii];10.1038/nrmicro1234 [doi].
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 711-721
-
-
Thomas, C.M.1
Nielsen, K.M.2
-
4
-
-
77953478153
-
The phage-related chromosomal islands of Gram-positive bacteria
-
Novick RP, Christie GE, Penades JR, (2010) The phage-related chromosomal islands of Gram-positive bacteria. Nat Rev Microbiol 8: 541-551 nrmicro2393 [pii];10.1038/nrmicro2393 [doi].
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 541-551
-
-
Novick, R.P.1
Christie, G.E.2
Penades, J.R.3
-
5
-
-
77954737999
-
Regulation of bacterial conjugation: balancing opportunity with adversity
-
Frost LS, Koraimann G, (2010) Regulation of bacterial conjugation: balancing opportunity with adversity. Future Microbiol 5: 1057-1071 10.2217/fmb.10.70 [doi].
-
(2010)
Future Microbiol
, vol.5
, pp. 1057-1071
-
-
Frost, L.S.1
Koraimann, G.2
-
6
-
-
77957976940
-
Mobility of plasmids
-
Smillie C, Garcillán-Barcia MP, Francia MV, Rocha EPC, De la Cruz F, (2010) Mobility of plasmids. Microbiol Mol Biol Rev 74: 434-452.
-
(2010)
Microbiol Mol Biol Rev
, vol.74
, pp. 434-452
-
-
Smillie, C.1
Garcillán-Barcia, M.P.2
Francia, M.V.3
Rocha, E.P.C.4
De la Cruz, F.5
-
7
-
-
71449116162
-
Biological diversity of prokaryotic type IV secretion systems
-
Alvarez-Martinez CE, Christie PJ, (2009) Biological diversity of prokaryotic type IV secretion systems. Microbiol Mol Biol Rev 73: 775-808.
-
(2009)
Microbiol Mol Biol Rev
, vol.73
, pp. 775-808
-
-
Alvarez-Martinez, C.E.1
Christie, P.J.2
-
8
-
-
70349277187
-
The structural biology of type IV secretion systems
-
Fronzes R, Christie PJ, Waksman G, (2009) The structural biology of type IV secretion systems. Nat Rev Microbiol 7: 703-714 nrmicro2218 [pii];10.1038/nrmicro2218 [doi].
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 703-714
-
-
Fronzes, R.1
Christie, P.J.2
Waksman, G.3
-
9
-
-
0037905748
-
Conjugative plasmid transfer in gram-positive bacteria
-
Grohmann E, Muth G, Espinosa M, (2003) Conjugative plasmid transfer in gram-positive bacteria. Microbiol Mol Biol Rev 67: 277-301.
-
(2003)
Microbiol Mol Biol Rev
, vol.67
, pp. 277-301
-
-
Grohmann, E.1
Muth, G.2
Espinosa, M.3
-
10
-
-
0018345041
-
Conjugative R plasmids in Streptococcus agalactiae (group B)
-
Horodniceanu T, Bougueleret L, El-Solh N, Bouanchaud DH, Chabbert YA, (1979) Conjugative R plasmids in Streptococcus agalactiae (group B). Plasmid 2: 197-206.
-
(1979)
Plasmid
, vol.2
, pp. 197-206
-
-
Horodniceanu, T.1
Bougueleret, L.2
El-Solh, N.3
Bouanchaud, D.H.4
Chabbert, Y.A.5
-
11
-
-
84872696193
-
The 2.5 A structure of the enterococcus conjugation protein TraM resembles VirB8 type IV secretion proteins
-
Goessweiner-Mohr N, Grumet L, Arends K, Pavkov-Keller T, Gruber CC, et al. (2013) The 2.5 A structure of the enterococcus conjugation protein TraM resembles VirB8 type IV secretion proteins. J Biol Chem 288: 2018-2028 M112.428847 [pii];10.1074/jbc.M112.428847 [doi].
-
(2013)
J Biol Chem
, vol.288
, pp. 2018-2028
-
-
Goessweiner-Mohr, N.1
Grumet, L.2
Arends, K.3
Pavkov-Keller, T.4
Gruber, C.C.5
-
12
-
-
84878250366
-
Toxin plasmids of Clostridium perfringens
-
Li J, Adams V, Bannam TL, Miyamoto K, Garcia JP, et al. (2013) Toxin plasmids of Clostridium perfringens. Microbiol Mol Biol Rev 77: 208-233 77/2/208 [pii];10.1128/MMBR.00062-12 [doi].
-
(2013)
Microbiol Mol Biol Rev
, vol.77
, pp. 208-233
-
-
Li, J.1
Adams, V.2
Bannam, T.L.3
Miyamoto, K.4
Garcia, J.P.5
-
13
-
-
84879191232
-
Biology of the staphylococcal conjugative multiresistance plasmid pSK41
-
Liu MA, Kwong SM, Jensen SO, Brzoska AJ, Firth N, (2013) Biology of the staphylococcal conjugative multiresistance plasmid pSK41. Plasmid 70: 42-51 S0147-619X(13)00022-X [pii];10.1016/j.plasmid.2013.02.001 [doi].
-
(2013)
Plasmid
, vol.70
, pp. 42-51
-
-
Liu, M.A.1
Kwong, S.M.2
Jensen, S.O.3
Brzoska, A.J.4
Firth, N.5
-
14
-
-
67349234973
-
Complete nucleotide sequence of pGO1, the prototype conjugative plasmid from the Staphylococci
-
Caryl JA, O'Neill AJ, (2009) Complete nucleotide sequence of pGO1, the prototype conjugative plasmid from the Staphylococci. Plasmid 62: 35-38 S0147-619X(09)00027-4 [pii];10.1016/j.plasmid.2009.03.001 [doi].
-
(2009)
Plasmid
, vol.62
, pp. 35-38
-
-
Caryl, J.A.1
O'Neill, A.J.2
-
15
-
-
84869030453
-
Tales of conjugation and sex pheromones: A plasmid and enterococcal odyssey
-
Clewell DB, (2011) Tales of conjugation and sex pheromones: A plasmid and enterococcal odyssey. Mob Genet Elements 1: 38-54 10.4161/mge.1.1.15409 [doi];2159-2543-1-1-6 [pii].
-
(2011)
Mob Genet Elements
, vol.1
, pp. 38-54
-
-
Clewell, D.B.1
-
16
-
-
79954615144
-
Regulatory circuits controlling enterococcal conjugation: lessons for functional genomics
-
Dunny GM, Johnson CM, (2011) Regulatory circuits controlling enterococcal conjugation: lessons for functional genomics. Curr Opin Microbiol 14: 174-180 S1369-5274(11)00020-8 [pii];10.1016/j.mib.2011.01.008 [doi].
-
(2011)
Curr Opin Microbiol
, vol.14
, pp. 174-180
-
-
Dunny, G.M.1
Johnson, C.M.2
-
17
-
-
84876828969
-
Antagonistic self-sensing and mate-sensing signaling controls antibiotic-resistance transfer
-
Chatterjee A, Cook LC, Shu CC, Chen Y, Manias DA, et al. (2013) Antagonistic self-sensing and mate-sensing signaling controls antibiotic-resistance transfer. Proc Natl Acad Sci U S A 110: 7086-7090 1212256110 [pii];10.1073/pnas.1212256110 [doi].
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 7086-7090
-
-
Chatterjee, A.1
Cook, L.C.2
Shu, C.C.3
Chen, Y.4
Manias, D.A.5
-
18
-
-
0003547837
-
-
Washington, D.C.: American Society for Microbiology
-
Sonenshein AL, Hoch JA, Losick R (1993) Bacillus subtilis and other Gram-positive bacteria; Biochemistry, physiology, and molecular genetics. Washington, D.C.: American Society for Microbiology. 987 p.
-
(1993)
Bacillus subtilis and other Gram-positive bacteria; Biochemistry, physiology, and molecular genetics
, pp. 987
-
-
Sonenshein, A.L.1
Hoch, J.A.2
Losick, R.3
-
20
-
-
0345616435
-
Bacillus subtilis soil isolates: plasmid replicon analysis and construction of a new theta-replicating vector
-
Titok MA, Chapuis J, Selezneva YV, Lagodich AV, Prokulevich VA, et al. (2003) Bacillus subtilis soil isolates: plasmid replicon analysis and construction of a new theta-replicating vector. Plasmid 49: 53-62.
-
(2003)
Plasmid
, vol.49
, pp. 53-62
-
-
Titok, M.A.1
Chapuis, J.2
Selezneva, Y.V.3
Lagodich, A.V.4
Prokulevich, V.A.5
-
21
-
-
79551719109
-
Bacillus probiotics
-
Cutting SM, (2011) Bacillus probiotics. Food Microbiol 28: 214-220 S0740-0020(10)00049-3 [pii];10.1016/j.fm.2010.03.007 [doi].
-
(2011)
Food Microbiol
, vol.28
, pp. 214-220
-
-
Cutting, S.M.1
-
22
-
-
0017521147
-
Isolation and characterization of four types of plasmids from Bacillus subtilis (natto)
-
Tanaka T, Koshikawa T, (1977) Isolation and characterization of four types of plasmids from Bacillus subtilis (natto). J Bacteriol 131: 699-701.
-
(1977)
J Bacteriol
, vol.131
, pp. 699-701
-
-
Tanaka, T.1
Koshikawa, T.2
-
23
-
-
0023447150
-
Bacillus subtilis (natto) plasmid pLS20 mediates interspecies plasmid transfer
-
Koehler TM, Thorne CB, (1987) Bacillus subtilis (natto) plasmid pLS20 mediates interspecies plasmid transfer. J Bacteriol 169: 5271-5278.
-
(1987)
J Bacteriol
, vol.169
, pp. 5271-5278
-
-
Koehler, T.M.1
Thorne, C.B.2
-
24
-
-
33645223518
-
Conjugational transfer kinetics of pLS20 between Bacillus subtilis in liquid medium
-
Itaya M, Sakaya N, Matsunaga S, Fujita K, Kaneko S, (2006) Conjugational transfer kinetics of pLS20 between Bacillus subtilis in liquid medium. Biosci Biotechnol Biochem 70: 740-742 JST.JSTAGE/bbb/70.740 [pii].
-
(2006)
Biosci Biotechnol Biochem
, vol.70
, pp. 740-742
-
-
Itaya, M.1
Sakaya, N.2
Matsunaga, S.3
Fujita, K.4
Kaneko, S.5
-
25
-
-
0029162683
-
Characterization of the replication region of the Bacillus subtilis plasmid pLS20: a novel type of replicon
-
Meijer WJJ, de Boer A, van Tongeren S, Venema G, Bron S, (1995) Characterization of the replication region of the Bacillus subtilis plasmid pLS20: a novel type of replicon. Nucleic Acids Res 23: 3214-3223.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 3214-3223
-
-
Meijer, W.J.J.1
de Boer, A.2
van Tongeren, S.3
Venema, G.4
Bron, S.5
-
26
-
-
70350141267
-
Phylogenetic analysis identifies many uncharacterized actin-like proteins (Alps) in bacteria: regulated polymerization, dynamic instability and treadmilling in Alp7A
-
Derman AI, Becker EC, Truong BD, Fujioka A, Tucey TM, et al. (2009) Phylogenetic analysis identifies many uncharacterized actin-like proteins (Alps) in bacteria: regulated polymerization, dynamic instability and treadmilling in Alp7A. Mol Microbiol 73: 534-552.
-
(2009)
Mol Microbiol
, vol.73
, pp. 534-552
-
-
Derman, A.I.1
Becker, E.C.2
Truong, B.D.3
Fujioka, A.4
Tucey, T.M.5
-
27
-
-
84867215489
-
Inhibition of Bacillus subtilis natural competence by a native, conjugative plasmid-encoded comK repressor protein
-
Singh PK, Ramachandran G, Duran-Alcalde L, Alonso C, Wu LJ, et al. (2012) Inhibition of Bacillus subtilis natural competence by a native, conjugative plasmid-encoded comK repressor protein. Environ Microbiol 14: 2812-2825 10.1111/j.1462-2920.2012.02819.x [doi].
-
(2012)
Environ Microbiol
, vol.14
, pp. 2812-2825
-
-
Singh, P.K.1
Ramachandran, G.2
Duran-Alcalde, L.3
Alonso, C.4
Wu, L.J.5
-
28
-
-
80655143422
-
Localization pattern of conjugation machinery in a Gram-positive bacterium
-
Bauer T, Rosch T, Itaya M, Graumann PL, (2011) Localization pattern of conjugation machinery in a Gram-positive bacterium. J Bacteriol 193: 6244-6256 JB.00175-11 [pii];10.1128/JB.00175-11 [doi].
-
(2011)
J Bacteriol
, vol.193
, pp. 6244-6256
-
-
Bauer, T.1
Rosch, T.2
Itaya, M.3
Graumann, P.L.4
-
29
-
-
0028596145
-
Multiple protein aspartate phosphatases provide a mechanism for the integration of diverse signals in the control of development in Bacillus subtilis
-
Perego M, Hanstein C, Welsh KM, Djavakhishvili T, Glaser P, et al. (1994) Multiple protein aspartate phosphatases provide a mechanism for the integration of diverse signals in the control of development in Bacillus subtilis. Cell 79: 1047-1055.
-
(1994)
Cell
, vol.79
, pp. 1047-1055
-
-
Perego, M.1
Hanstein, C.2
Welsh, K.M.3
Djavakhishvili, T.4
Glaser, P.5
-
30
-
-
0029959768
-
Purification and characterization of an extracellular peptide factor that affects different developmental pathways in Bacillus subtilis
-
Solomon JM, Lazazzera BA, Grossman AD, (1996) Purification and characterization of an extracellular peptide factor that affects different developmental pathways in Bacillus subtilis. Genes Develop 10: 2014-2024.
-
(1996)
Genes Develop
, vol.10
, pp. 2014-2024
-
-
Solomon, J.M.1
Lazazzera, B.A.2
Grossman, A.D.3
-
31
-
-
0030830216
-
An exported peptide functions intracellularly to contribute to cell density signaling in B. subtilis
-
Lazazzera BA, Solomon JM, Grossman AD, (1997) An exported peptide functions intracellularly to contribute to cell density signaling in B. subtilis. Cell 89: 917-925 S0092-8674(00)80277-9 [pii].
-
(1997)
Cell
, vol.89
, pp. 917-925
-
-
Lazazzera, B.A.1
Solomon, J.M.2
Grossman, A.D.3
-
32
-
-
0029883587
-
Cell-cell communication regulates the effects of protein aspartate phosphatases on the phosphorelay controlling development in Bacillus subtilis
-
Perego M, Hoch JA, (1996) Cell-cell communication regulates the effects of protein aspartate phosphatases on the phosphorelay controlling development in Bacillus subtilis. Proc Natl Acad Sci USA 93: 1549-1553.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 1549-1553
-
-
Perego, M.1
Hoch, J.A.2
-
33
-
-
0033711144
-
Multiple histidine kinases regulate entry into stationary phase and sporulation in Bacillus subtilis
-
Jiang M, Shao W, Perego M, Hoch JA, (2000) Multiple histidine kinases regulate entry into stationary phase and sporulation in Bacillus subtilis. Mol Microbiol 38: 535-542.
-
(2000)
Mol Microbiol
, vol.38
, pp. 535-542
-
-
Jiang, M.1
Shao, W.2
Perego, M.3
Hoch, J.A.4
-
34
-
-
0141677727
-
Binding of response regulator DegU to the aprE promoter is inhibited by RapG, which is counteracted by extracellular PhrG in Bacillus subtilis
-
3665 [pii]
-
Ogura M, Shimane K, Asai K, Ogasawara N, Tanaka T (2003) Binding of response regulator DegU to the aprE promoter is inhibited by RapG, which is counteracted by extracellular PhrG in Bacillus subtilis. Mol Microbiol 49: 1685-1697. 3665 [pii].
-
(2003)
Mol Microbiol
, vol.49
, pp. 1685-1697
-
-
Ogura, M.1
Shimane, K.2
Asai, K.3
Ogasawara, N.4
Tanaka, T.5
-
35
-
-
34250648354
-
Temporal separation of distinct differentiation pathwasys by a dual specificity Rap-Phr system in Bacillus subtilis
-
Smits WK, Bongiorni C, Veening JW, Hamoen LW, Kuipers OP, et al. (2007) Temporal separation of distinct differentiation pathwasys by a dual specificity Rap-Phr system in Bacillus subtilis. Mol Microbiol 65: 103-120.
-
(2007)
Mol Microbiol
, vol.65
, pp. 103-120
-
-
Smits, W.K.1
Bongiorni, C.2
Veening, J.W.3
Hamoen, L.W.4
Kuipers, O.P.5
-
36
-
-
0031905297
-
Rolling-circle plasmids from Bacillus subtilis: complete nucleotide sequences and analyses of genes of pTA1015, pTA1040, pTA1050 and pTA1060, and comparisons with related plasmids from Gram-positive bacteria
-
Meijer WJJ, Wisman GBA, Terpstra P, Thorsted PB, Thomas CM, et al. (1998) Rolling-circle plasmids from Bacillus subtilis: complete nucleotide sequences and analyses of genes of pTA1015, pTA1040, pTA1050 and pTA1060, and comparisons with related plasmids from Gram-positive bacteria. FEMS Microbiol Rev 21: 337-368.
-
(1998)
FEMS Microbiol Rev
, vol.21
, pp. 337-368
-
-
Meijer, W.J.J.1
Wisman, G.B.A.2
Terpstra, P.3
Thorsted, P.B.4
Thomas, C.M.5
-
37
-
-
78649865586
-
Complete nucleotide sequence and determination of the replication region of the sporulation inhibiting plasmid p576 from Bacillus pumilus NRS576
-
Singh PK, Ballestero-Beltran S, Ramachandran G, Meijer WJ, (2010) Complete nucleotide sequence and determination of the replication region of the sporulation inhibiting plasmid p576 from Bacillus pumilus NRS576. Res Microbiol 161: 772-782 S0923-2508(10)00186-5 [pii];10.1016/j.resmic.2010.07.007 [doi].
-
(2010)
Res Microbiol
, vol.161
, pp. 772-782
-
-
Singh, P.K.1
Ballestero-Beltran, S.2
Ramachandran, G.3
Meijer, W.J.4
-
38
-
-
30744446776
-
Rap phosphatases of virulence plasmid pXO1 inhibits Bacillus anthracis sporulation
-
Bongiorni C, Stoessel R, Shoemaker D, Perego M, (2006) Rap phosphatases of virulence plasmid pXO1 inhibits Bacillus anthracis sporulation. J Bacteriol 188: 487-498.
-
(2006)
J Bacteriol
, vol.188
, pp. 487-498
-
-
Bongiorni, C.1
Stoessel, R.2
Shoemaker, D.3
Perego, M.4
-
39
-
-
0037256283
-
A plasmid-borne Rap-Phr system of Bacillus subtilis can mediate cell-density controlled production of extracellular proteases
-
Koetje EJ, Hajdo-Milasinovic A, Kiewiet R, Bron S, Tjalsma H, (2003) A plasmid-borne Rap-Phr system of Bacillus subtilis can mediate cell-density controlled production of extracellular proteases. Microbiology 149: 19-28.
-
(2003)
Microbiology
, vol.149
, pp. 19-28
-
-
Koetje, E.J.1
Hajdo-Milasinovic, A.2
Kiewiet, R.3
Bron, S.4
Tjalsma, H.5
-
40
-
-
84877971130
-
A plasmid-encoded phosphatase regulates Bacillus subtilis biofilm architecture, sporulation, and genetic competence
-
Parashar V, Konkol MA, Kearns DB, Neiditch MB, (2013) A plasmid-encoded phosphatase regulates Bacillus subtilis biofilm architecture, sporulation, and genetic competence. J Bacteriol 195: 2437-2448 JB.02030-12 [pii];10.1128/JB.02030-12 [doi].
-
(2013)
J Bacteriol
, vol.195
, pp. 2437-2448
-
-
Parashar, V.1
Konkol, M.A.2
Kearns, D.B.3
Neiditch, M.B.4
-
41
-
-
0036425161
-
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration
-
S0147619X02001026 [pii]
-
Burrus V, Pavlovic G, Decaris B, Guedon G (2002) The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration. Plasmid 48: 77-97. S0147619X02001026 [pii].
-
(2002)
Plasmid
, vol.48
, pp. 77-97
-
-
Burrus, V.1
Pavlovic, G.2
Decaris, B.3
Guedon, G.4
-
42
-
-
24644481914
-
Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response
-
Auchtung JM, Lee CA, Monson RE, Lehman AP, Grossman AD, (2005) Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage response. Proc Natl Acad Sci U S A 102: 12554-12559 0505835102 [pii];10.1073/pnas.0505835102 [doi].
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 12554-12559
-
-
Auchtung, J.M.1
Lee, C.A.2
Monson, R.E.3
Lehman, A.P.4
Grossman, A.D.5
-
43
-
-
0141735901
-
The extracellular Phr peptide-Rap phosphatase signaling circuit of Bacillus subtilis
-
Pottathil M, Lazazzera BA, (2003) The extracellular Phr peptide-Rap phosphatase signaling circuit of Bacillus subtilis. Front Biosci 8: d32-d45.
-
(2003)
Front Biosci
, vol.8
-
-
Pottathil, M.1
Lazazzera, B.A.2
-
44
-
-
79952253629
-
Structural basis of response regulator dephosphorylation by Rap phosphatases
-
Parashar V, Mirouze N, Dubnau DA, Neiditch MB, (2011) Structural basis of response regulator dephosphorylation by Rap phosphatases. PLoS Biol 9: e1000589 10.1371/journal.pbio.1000589 [doi].
-
(2011)
PLoS Biol
, vol.9
-
-
Parashar, V.1
Mirouze, N.2
Dubnau, D.A.3
Neiditch, M.B.4
-
45
-
-
84855171401
-
Structural basis of response regulator inhibition by a bacterial anti-activator protein
-
Baker MD, Neiditch MB, (2011) Structural basis of response regulator inhibition by a bacterial anti-activator protein. PLoS Biol 9: e1001226 10.1371/journal.pbio.1001226 [doi];PBIOLOGY-D-11-02308 [pii].
-
(2011)
PLoS Biol
, vol.9
-
-
Baker, M.D.1
Neiditch, M.B.2
-
46
-
-
0025964291
-
Initiation of sporulation in B. subtilis is controlled by a multicomponent phosphorelay
-
Burbulys D, Trach KA, Hoch JA, (1991) Initiation of sporulation in B. subtilis is controlled by a multicomponent phosphorelay. Cell 64: 545-552.
-
(1991)
Cell
, vol.64
, pp. 545-552
-
-
Burbulys, D.1
Trach, K.A.2
Hoch, J.A.3
-
47
-
-
21144458703
-
Synergistic regulation of competence development in Bacillus subtilis by two Rap-Phr systems
-
Bongiorni C, Ishikawa S, Stephenson S, Ogasawara N, Perego M, (2005) Synergistic regulation of competence development in Bacillus subtilis by two Rap-Phr systems. J Bacteriol 187: 4353-4361.
-
(2005)
J Bacteriol
, vol.187
, pp. 4353-4361
-
-
Bongiorni, C.1
Ishikawa, S.2
Stephenson, S.3
Ogasawara, N.4
Perego, M.5
-
48
-
-
0141454873
-
TPR-mediated interaction of RapC with ComA inhibits response regulator-DNA binding for competence development in Bacillus subtilis
-
3659 [pii]
-
Core L, Perego M (2003) TPR-mediated interaction of RapC with ComA inhibits response regulator-DNA binding for competence development in Bacillus subtilis. Mol Microbiol 49: 1509-1522. 3659 [pii].
-
(2003)
Mol Microbiol
, vol.49
, pp. 1509-1522
-
-
Core, L.1
Perego, M.2
-
49
-
-
27944442272
-
Quorum sensing: cell-to-cell communication in bacteria
-
Waters CM, Bassler BL, (2005) Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol 21: 319-346 10.1146/annurev.cellbio.21.012704.131001 [doi].
-
(2005)
Annu Rev Cell Dev Biol
, vol.21
, pp. 319-346
-
-
Waters, C.M.1
Bassler, B.L.2
-
50
-
-
77952303129
-
Biosynthesis of peptide signals in gram-positive bacteria
-
Thoendel M, Horswill AR, (2010) Biosynthesis of peptide signals in gram-positive bacteria. Adv Appl Microbiol 71: 91-112 S0065-2164(10)71004-2 [pii];10.1016/S0065-2164(10)71004-2 [doi].
-
(2010)
Adv Appl Microbiol
, vol.71
, pp. 91-112
-
-
Thoendel, M.1
Horswill, A.R.2
-
51
-
-
0033945446
-
The bases of crown gall tumorigenesis
-
Zhu J, Oger PM, Schrammeijer B, Hooykaas PJ, Farrand SK, et al. (2000) The bases of crown gall tumorigenesis. J Bacteriol 182: 3885-3895.
-
(2000)
J Bacteriol
, vol.182
, pp. 3885-3895
-
-
Zhu, J.1
Oger, P.M.2
Schrammeijer, B.3
Hooykaas, P.J.4
Farrand, S.K.5
-
52
-
-
53849090635
-
A conserved anti-repressor controls horizontal gene transfer by proteolysis
-
Bose B, Auchtung JM, Lee CA, Grossman AD, (2008) A conserved anti-repressor controls horizontal gene transfer by proteolysis. Mol Microbiol 70: 570-582 MMI6414 [pii];10.1111/j.1365-2958.2008.06414.x [doi].
-
(2008)
Mol Microbiol
, vol.70
, pp. 570-582
-
-
Bose, B.1
Auchtung, J.M.2
Lee, C.A.3
Grossman, A.D.4
-
53
-
-
78650147137
-
Regulation of horizontal gene transfer in Bacillus subtilis by activation of a conserved site-specific protease
-
Bose B, Grossman AD, (2011) Regulation of horizontal gene transfer in Bacillus subtilis by activation of a conserved site-specific protease. J Bacteriol 193: 22-29 JB.01143-10 [pii];10.1128/JB.01143-10 [doi].
-
(2011)
J Bacteriol
, vol.193
, pp. 22-29
-
-
Bose, B.1
Grossman, A.D.2
-
54
-
-
80052333445
-
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation
-
Guglielmini J, Quintais L, Garcillan-Barcia MP, De la Cruz F, Rocha EP, (2011) The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation. PLoS Genet 7: e1002222 10.1371/journal.pgen.1002222 [doi];PGENETICS-D-11-00532 [pii].
-
(2011)
PLoS Genet
, vol.7
-
-
Guglielmini, J.1
Quintais, L.2
Garcillan-Barcia, M.P.3
De la Cruz, F.4
Rocha, E.P.5
-
55
-
-
0027506115
-
Transition state regulators: sentinels of Bacillus subtilis post-exponential gene expression
-
Strauch MA, Hoch JA, (1993) Transition state regulators: sentinels of Bacillus subtilis post-exponential gene expression. Mol Microbiol 7: 337-342.
-
(1993)
Mol Microbiol
, vol.7
, pp. 337-342
-
-
Strauch, M.A.1
Hoch, J.A.2
-
56
-
-
84875472270
-
Conformational change-induced repeat domain expansion regulates rap phosphatase quorum-sensing signal receptors
-
Parashar V, Jeffrey PD, Neiditch MB, (2013) Conformational change-induced repeat domain expansion regulates rap phosphatase quorum-sensing signal receptors. PLoS Biol 11: e1001512 10.1371/journal.pbio.1001512 [doi];PBIOLOGY-D-12-03568 [pii].
-
(2013)
PLoS Biol
, vol.11
-
-
Parashar, V.1
Jeffrey, P.D.2
Neiditch, M.B.3
-
58
-
-
0002492795
-
Plasmids
-
In: Harwood CR, Cutting SM, editors Chichester, UK: John Wiley & Sons Ltd
-
Bron S (1990) Plasmids. In: Harwood CR, Cutting SM, editors. Molecular Biological Methods for Bacillus. Chichester, UK: John Wiley & Sons Ltd. pp. 75-174.
-
(1990)
Molecular Biological Methods for Bacillus
, pp. 75-174
-
-
Bron, S.1
-
60
-
-
79951667638
-
Simple, fast and high-efficiency transformation system for directed evolution of cellulase in Bacillus subtilis
-
Zhang XZ, Zhang YH, (2011) Simple, fast and high-efficiency transformation system for directed evolution of cellulase in Bacillus subtilis. Microb Biotechnol 4: 98-105 10.1111/j.1751-7915.2010.00230.x [doi].
-
(2011)
Microb Biotechnol
, vol.4
, pp. 98-105
-
-
Zhang, X.Z.1
Zhang, Y.H.2
-
61
-
-
70350653808
-
Transcriptome analysis by strand-specific sequencing of complementary DNA
-
Parkhomchuk D, Borodina T, Amstislavskiy V, Banaru M, Hallen L, et al. (2009) Transcriptome analysis by strand-specific sequencing of complementary DNA. Nucleic Acids Res 37: e123 gkp596 [pii];10.1093/nar/gkp596 [doi].
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Parkhomchuk, D.1
Borodina, T.2
Amstislavskiy, V.3
Banaru, M.4
Hallen, L.5
-
62
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25 gb-2009-10-3-r25 [pii];10.1186/gb-2009-10-3-r25 [doi].
-
(2009)
Genome Biol
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
63
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing B, Hillier L, Wendl MC, Green P, (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8: 175-185.
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
64
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing B, Green P, (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
65
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. J Mol Biol 215: 403-410 10.1016/S0022-2836(05)80360-2 [doi];S0022-2836(05)80360-2 [pii].
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
66
-
-
80455129694
-
Efficiently identifying genome-wide changes with next-generation sequencing data
-
Huang W, Umbach DM, Vincent JN, Abell AN, Johnson GL, et al. (2011) Efficiently identifying genome-wide changes with next-generation sequencing data. Nucleic Acids Res 39: e130 gkr592 [pii];10.1093/nar/gkr592 [doi].
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Huang, W.1
Umbach, D.M.2
Vincent, J.N.3
Abell, A.N.4
Johnson, G.L.5
-
67
-
-
0037314097
-
Matrix2png: a utility for visualizing matrix data
-
Pavlidis P, Noble WS, (2003) Matrix2png: a utility for visualizing matrix data. Bioinformatics 19: 295-296.
-
(2003)
Bioinformatics
, vol.19
, pp. 295-296
-
-
Pavlidis, P.1
Noble, W.S.2
|