-
1
-
-
84870593895
-
Cryo-EM structure of a 3D DNA-origami object
-
Bai X.C., Martin T.G., Scheres S.H., Dietz H. Cryo-EM structure of a 3D DNA-origami object. Proc. Natl. Acad. Sci. USA 2012, 109:20012-20017.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 20012-20017
-
-
Bai, X.C.1
Martin, T.G.2
Scheres, S.H.3
Dietz, H.4
-
2
-
-
63649154791
-
Determination of signal-to-noise ratios and spectral SNRs in cryo-EM low-dose imaging of molecules
-
Baxter W.T., Grassucci R.A., Gao H., Frank J. Determination of signal-to-noise ratios and spectral SNRs in cryo-EM low-dose imaging of molecules. J. Struct. Biol. 2009, 166:126-132.
-
(2009)
J. Struct. Biol.
, vol.166
, pp. 126-132
-
-
Baxter, W.T.1
Grassucci, R.A.2
Gao, H.3
Frank, J.4
-
3
-
-
84866269021
-
Near-atomic resolution structural model of the yeast 26S proteasome
-
Beck F., Unverdorben P., Bohn S., Schweitzer A., Pfeifer G., et al. Near-atomic resolution structural model of the yeast 26S proteasome. Proc. Natl. Acad. Sci. USA 2012, 109:14870-14875.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 14870-14875
-
-
Beck, F.1
Unverdorben, P.2
Bohn, S.3
Schweitzer, A.4
Pfeifer, G.5
-
4
-
-
0141814660
-
Diversity of core antigen epitopes of hepatitis B virus
-
Belnap D.M., Watts N.R., Conway J.F., Cheng N., Stahl S.J., et al. Diversity of core antigen epitopes of hepatitis B virus. Proc. Natl. Acad. Sci. USA 2003, 100:10884-10889.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 10884-10889
-
-
Belnap, D.M.1
Watts, N.R.2
Conway, J.F.3
Cheng, N.4
Stahl, S.J.5
-
5
-
-
23044510524
-
A resolution criterion for electron tomography based on cross-validation
-
Cardone G., Grünewald K., Steven A.C. A resolution criterion for electron tomography based on cross-validation. J. Struct. Biol. 2005, 151:117-129.
-
(2005)
J. Struct. Biol.
, vol.151
, pp. 117-129
-
-
Cardone, G.1
Grünewald, K.2
Steven, A.C.3
-
6
-
-
59649084913
-
Visualization of a missing link in retrovirus capsid assembly
-
Cardone G., Purdy J.G., Cheng N., Craven R.C., Steven A.C. Visualization of a missing link in retrovirus capsid assembly. Nature 2009, 457:694-698.
-
(2009)
Nature
, vol.457
, pp. 694-698
-
-
Cardone, G.1
Purdy, J.G.2
Cheng, N.3
Craven, R.C.4
Steven, A.C.5
-
7
-
-
84858240360
-
Procapsid assembly, maturation, nuclear exit: dynamic steps in the production of infectious herpesvirions
-
Cardone G., Heymann J.B., Cheng N., Trus B.L., Steven A.C. Procapsid assembly, maturation, nuclear exit: dynamic steps in the production of infectious herpesvirions. Adv. Exp. Med. Biol. 2012, 726:423-439.
-
(2012)
Adv. Exp. Med. Biol.
, vol.726
, pp. 423-439
-
-
Cardone, G.1
Heymann, J.B.2
Cheng, N.3
Trus, B.L.4
Steven, A.C.5
-
8
-
-
0019813567
-
Assembly and packing of clathrin into coats
-
Crowther R.A., Pearse B.M. Assembly and packing of clathrin into coats. J. Cell Biol. 1981, 91:790-797.
-
(1981)
J. Cell Biol.
, vol.91
, pp. 790-797
-
-
Crowther, R.A.1
Pearse, B.M.2
-
9
-
-
51549084591
-
Sharpening high resolution information in single particle electron cryomicroscopy
-
Fernandez J.J., Luque D., Caston J.R., Carrascosa J.L. Sharpening high resolution information in single particle electron cryomicroscopy. J. Struct. Biol. 2008, 164:170-175.
-
(2008)
J. Struct. Biol.
, vol.164
, pp. 170-175
-
-
Fernandez, J.J.1
Luque, D.2
Caston, J.R.3
Carrascosa, J.L.4
-
10
-
-
0016789772
-
Signal-to-noise ratio of electron micrographs obtained by cross correlation
-
Frank J., Al-Ali L. Signal-to-noise ratio of electron micrographs obtained by cross correlation. Nature 1975, 256:376-379.
-
(1975)
Nature
, vol.256
, pp. 376-379
-
-
Frank, J.1
Al-Ali, L.2
-
11
-
-
0019802812
-
Computer averaging of electron micrographs of 40S ribosomal subunits
-
Frank J., Verschoor A., Boublik M. Computer averaging of electron micrographs of 40S ribosomal subunits. Science 1981, 214:1353-1355.
-
(1981)
Science
, vol.214
, pp. 1353-1355
-
-
Frank, J.1
Verschoor, A.2
Boublik, M.3
-
12
-
-
4344605740
-
Dynamics of EF-G interaction with the ribosome explored by classification of a heterogeneous cryo-EM dataset
-
Gao H., Valle M., Ehrenberg M., Frank J. Dynamics of EF-G interaction with the ribosome explored by classification of a heterogeneous cryo-EM dataset. J. Struct. Biol. 2004, 147:283-290.
-
(2004)
J. Struct. Biol.
, vol.147
, pp. 283-290
-
-
Gao, H.1
Valle, M.2
Ehrenberg, M.3
Frank, J.4
-
13
-
-
0000313739
-
Exact filters for general geometry three-dimensional reconstruction
-
Harauz G., van Heel M. Exact filters for general geometry three-dimensional reconstruction. Optik 1986, 73:146-156.
-
(1986)
Optik
, vol.73
, pp. 146-156
-
-
Harauz, G.1
van Heel, M.2
-
14
-
-
0017851927
-
On the use of windows for harmonic analysis with the discrete Fourier transform
-
Harris F.J. On the use of windows for harmonic analysis with the discrete Fourier transform. Proc. IEEE 1978, 66:51-83.
-
(1978)
Proc. IEEE
, vol.66
, pp. 51-83
-
-
Harris, F.J.1
-
15
-
-
28944446740
-
Epitope diversity of hepatitis B virus capsids: quasi-equivalent variations in spike epitopes and binding of different antibodies to the same epitope
-
Harris A., Belnap D.M., Watts N.R., Conway J.F., Cheng N., et al. Epitope diversity of hepatitis B virus capsids: quasi-equivalent variations in spike epitopes and binding of different antibodies to the same epitope. J. Mol. Biol. 2006, 355:562-576.
-
(2006)
J. Mol. Biol.
, vol.355
, pp. 562-576
-
-
Harris, A.1
Belnap, D.M.2
Watts, N.R.3
Conway, J.F.4
Cheng, N.5
-
16
-
-
84878333225
-
Structure of the mammalian ribosomal 43S preinitiation complex bound to the scanning factor DHX29
-
Hashem Y., des Georges A., Dhote V., Langlois R., Liao H.Y., et al. Structure of the mammalian ribosomal 43S preinitiation complex bound to the scanning factor DHX29. Cell 2013, 153:1108-1119.
-
(2013)
Cell
, vol.153
, pp. 1108-1119
-
-
Hashem, Y.1
des Georges, A.2
Dhote, V.3
Langlois, R.4
Liao, H.Y.5
-
17
-
-
84874191297
-
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
-
Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., et al. High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome. Nature 2013, 494:385-389.
-
(2013)
Nature
, vol.494
, pp. 385-389
-
-
Hashem, Y.1
des Georges, A.2
Fu, J.3
Buss, S.N.4
Jossinet, F.5
-
18
-
-
33845336533
-
Bsoft: image processing and molecular modeling for electron microscopy
-
Heymann J.B., Belnap D.M. Bsoft: image processing and molecular modeling for electron microscopy. J. Struct. Biol. 2007, 157:3-18.
-
(2007)
J. Struct. Biol.
, vol.157
, pp. 3-18
-
-
Heymann, J.B.1
Belnap, D.M.2
-
19
-
-
14844331402
-
Visualization of the binding of Hsc70 ATPase to clathrin baskets: implications for an uncoating mechanism
-
Heymann J.B., Iwasaki K., Yim Y.I., Cheng N., Belnap D.M., et al. Visualization of the binding of Hsc70 ATPase to clathrin baskets: implications for an uncoating mechanism. J. Biol. Chem. 2005, 280:7156-7161.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 7156-7161
-
-
Heymann, J.B.1
Iwasaki, K.2
Yim, Y.I.3
Cheng, N.4
Belnap, D.M.5
-
20
-
-
84887218828
-
Short-space Fourier transform image processing
-
IEEE International Conference on Acoustics, Speech and Signal Processing, IEEE, San Diego, CA
-
Hinman, B., Bernstein, J., Staelin, D. 1984. Short-space Fourier transform image processing. In: IEEE International Conference on Acoustics, Speech and Signal Processing, vol. 9, IEEE, San Diego, CA, pp. 166-169.
-
(1984)
, vol.9
, pp. 166-169
-
-
Hinman, B.1
Bernstein, J.2
Staelin, D.3
-
21
-
-
4344559453
-
The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes
-
Huiskonen J.T., Kivela H.M., Bamford D.H., Butcher S.J. The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes. Nat. Struct. Mol. Biol. 2004, 11:850-856.
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 850-856
-
-
Huiskonen, J.T.1
Kivela, H.M.2
Bamford, D.H.3
Butcher, S.J.4
-
22
-
-
1242345623
-
The N-terminal substrate-binding domain of ClpA unfoldase is highly mobile and extends axially from the distal surface of ClpAP protease
-
Ishikawa T., Maurizi M.R., Steven A.C. The N-terminal substrate-binding domain of ClpA unfoldase is highly mobile and extends axially from the distal surface of ClpAP protease. J. Struct. Biol. 2004, 146:180-188.
-
(2004)
J. Struct. Biol.
, vol.146
, pp. 180-188
-
-
Ishikawa, T.1
Maurizi, M.R.2
Steven, A.C.3
-
23
-
-
77951974177
-
Structural aspects of messenger RNA reading frame maintenance by the ribosome
-
Jenner L.B., Demeshkina N., Yusupova G., Yusupov M. Structural aspects of messenger RNA reading frame maintenance by the ribosome. Nat. Struct. Mol. Biol. 2010, 17:555-560.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 555-560
-
-
Jenner, L.B.1
Demeshkina, N.2
Yusupova, G.3
Yusupov, M.4
-
24
-
-
84985269049
-
The structure of the stalk surface layer of a brine pond microorganism: correlation averaging applied to a double layered lattice structure
-
Kessel M., Radermacher M., Frank J. The structure of the stalk surface layer of a brine pond microorganism: correlation averaging applied to a double layered lattice structure. J. Microsc. 1985, 139:63-74.
-
(1985)
J. Microsc.
, vol.139
, pp. 63-74
-
-
Kessel, M.1
Radermacher, M.2
Frank, J.3
-
25
-
-
0034659842
-
Structure and self-association of the Rous sarcoma virus capsid protein
-
Kingston R.L., Fitzon-Ostendorp T., Eisenmesser E.Z., Schatz G.W., Vogt V.M., et al. Structure and self-association of the Rous sarcoma virus capsid protein. Structure 2000, 8:617-628.
-
(2000)
Structure
, vol.8
, pp. 617-628
-
-
Kingston, R.L.1
Fitzon-Ostendorp, T.2
Eisenmesser, E.Z.3
Schatz, G.W.4
Vogt, V.M.5
-
26
-
-
84856976866
-
Complete subunit architecture of the proteasome regulatory particle
-
Lander G.C., Estrin E., Matyskiela M.E., Bashore C., Nogales E., et al. Complete subunit architecture of the proteasome regulatory particle. Nature 2012, 482:186-191.
-
(2012)
Nature
, vol.482
, pp. 186-191
-
-
Lander, G.C.1
Estrin, E.2
Matyskiela, M.E.3
Bashore, C.4
Nogales, E.5
-
27
-
-
84857134729
-
Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach
-
Lasker K., Forster F., Bohn S., Walzthoeni T., Villa E., et al. Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach. Proc. Natl. Acad. Sci. USA 2012, 109:1380-1387.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 1380-1387
-
-
Lasker, K.1
Forster, F.2
Bohn, S.3
Walzthoeni, T.4
Villa, E.5
-
28
-
-
51549117861
-
Exploration of parameters in cryo-EM leading to an improved density map of the E. coli ribosome
-
LeBarron J., Grassucci R.A., Shaikh T.R., Baxter W.T., Sengupta J., et al. Exploration of parameters in cryo-EM leading to an improved density map of the E. coli ribosome. J. Struct. Biol. 2008, 164:24-32.
-
(2008)
J. Struct. Biol.
, vol.164
, pp. 24-32
-
-
LeBarron, J.1
Grassucci, R.A.2
Shaikh, T.R.3
Baxter, W.T.4
Sengupta, J.5
-
29
-
-
34347236451
-
Visualizing flexibility at molecular resolution: analysis of heterogeneity in single-particle electron microscopy reconstructions
-
Leschziner A.E., Nogales E. Visualizing flexibility at molecular resolution: analysis of heterogeneity in single-particle electron microscopy reconstructions. Annu. Rev. Biophys. Biomol. Struct. 2007, 36:43-62.
-
(2007)
Annu. Rev. Biophys. Biomol. Struct.
, vol.36
, pp. 43-62
-
-
Leschziner, A.E.1
Nogales, E.2
-
30
-
-
77954643550
-
Definition and estimation of resolution in single-particle reconstructions
-
Liao H.Y., Frank J. Definition and estimation of resolution in single-particle reconstructions. Structure 2010, 18:768-775.
-
(2010)
Structure
, vol.18
, pp. 768-775
-
-
Liao, H.Y.1
Frank, J.2
-
31
-
-
80053948556
-
An externalized polypeptide partitions between two distinct sites on genome-released poliovirus particles
-
Lin J., Cheng N., Chow M., Filman D.J., Steven A.C., et al. An externalized polypeptide partitions between two distinct sites on genome-released poliovirus particles. J. Virol. 2011, 85:9974-9983.
-
(2011)
J. Virol.
, vol.85
, pp. 9974-9983
-
-
Lin, J.1
Cheng, N.2
Chow, M.3
Filman, D.J.4
Steven, A.C.5
-
32
-
-
0033377664
-
EMAN: semiautomated software for high-resolution single-particle reconstructions
-
Ludtke S.J., Baldwin P.R., Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. J. Struct. Biol. 1999, 128:82-97.
-
(1999)
J. Struct. Biol.
, vol.128
, pp. 82-97
-
-
Ludtke, S.J.1
Baldwin, P.R.2
Chiu, W.3
-
33
-
-
53349176566
-
Molecular architecture of the "stressosome", a signal integration and transduction hub
-
Marles-Wright J., Grant T., Delumeau O., van Duinen G., Firbank S.J., et al. Molecular architecture of the "stressosome", a signal integration and transduction hub. Science 2008, 322:92-96.
-
(2008)
Science
, vol.322
, pp. 92-96
-
-
Marles-Wright, J.1
Grant, T.2
Delumeau, O.3
van Duinen, G.4
Firbank, S.J.5
-
34
-
-
37349107850
-
Ribosome binding of a single copy of the SecY complex: implications for protein translocation
-
Menetret J.F., Schaletzky J., Clemons W.M., Osborne A.R., Skanland S.S., et al. Ribosome binding of a single copy of the SecY complex: implications for protein translocation. Mol. Cell 2007, 28:1083-1092.
-
(2007)
Mol. Cell
, vol.28
, pp. 1083-1092
-
-
Menetret, J.F.1
Schaletzky, J.2
Clemons, W.M.3
Osborne, A.R.4
Skanland, S.S.5
-
36
-
-
0036417211
-
Three-dimensional spectral signal-to-noise ratio for a class of reconstruction algorithms
-
Penczek P.A. Three-dimensional spectral signal-to-noise ratio for a class of reconstruction algorithms. J. Struct. Biol. 2002, 138:34-46.
-
(2002)
J. Struct. Biol.
, vol.138
, pp. 34-46
-
-
Penczek, P.A.1
-
37
-
-
33644847296
-
Estimation of variance in single-particle reconstruction using the bootstrap technique
-
Penczek P.A., Yang C., Frank J., Spahn C.M. Estimation of variance in single-particle reconstruction using the bootstrap technique. J. Struct. Biol. 2006, 154:168-183.
-
(2006)
J. Struct. Biol.
, vol.154
, pp. 168-183
-
-
Penczek, P.A.1
Yang, C.2
Frank, J.3
Spahn, C.M.4
-
38
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen E.F., Goddard T.D., Huang C.C., Couch G.S., Greenblatt D.M., et al. UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 2004, 25:1605-1612.
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
-
39
-
-
43749097090
-
Critical role of conserved hydrophobic residues within the major homology region in mature retroviral capsid assembly
-
Purdy J.G., Flanagan J.M., Ropson I.J., Rennoll-Bankert K.E., Craven R.C. Critical role of conserved hydrophobic residues within the major homology region in mature retroviral capsid assembly. J. Virol. 2008, 82:5951-5961.
-
(2008)
J. Virol.
, vol.82
, pp. 5951-5961
-
-
Purdy, J.G.1
Flanagan, J.M.2
Ropson, I.J.3
Rennoll-Bankert, K.E.4
Craven, R.C.5
-
40
-
-
0142042865
-
Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy
-
Rosenthal P.B., Henderson R. Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. J. Mol. Biol. 2003, 333:721-745.
-
(2003)
J. Mol. Biol.
, vol.333
, pp. 721-745
-
-
Rosenthal, P.B.1
Henderson, R.2
-
42
-
-
0019987933
-
The correlation averaging of a regularly arranged bacterial cell envelope protein
-
Saxton W.O., Baumeister W. The correlation averaging of a regularly arranged bacterial cell envelope protein. J. Microsc. 1982, 127:127-138.
-
(1982)
J. Microsc.
, vol.127
, pp. 127-138
-
-
Saxton, W.O.1
Baumeister, W.2
-
43
-
-
33845291163
-
Ab initio resolution measurement for single particle structures
-
Sousa D., Grigorieff N. Ab initio resolution measurement for single particle structures. J. Struct. Biol. 2007, 157:201-210.
-
(2007)
J. Struct. Biol.
, vol.157
, pp. 201-210
-
-
Sousa, D.1
Grigorieff, N.2
-
44
-
-
0034194374
-
Digitally collected cryo-electron micrographs for single particle reconstruction
-
Stewart P.L., Cary R.B., Peterson S.R., Chiu C.Y. Digitally collected cryo-electron micrographs for single particle reconstruction. Microsc. Res. Technol. 2000, 49:224-232.
-
(2000)
Microsc. Res. Technol.
, vol.49
, pp. 224-232
-
-
Stewart, P.L.1
Cary, R.B.2
Peterson, S.R.3
Chiu, C.Y.4
-
45
-
-
78649908437
-
Maximum likelihood based classification of electron tomographic data
-
Stolken M., Beck F., Haller T., Hegerl R., Gutsche I., et al. Maximum likelihood based classification of electron tomographic data. J. Struct. Biol. 2011, 173:77-85.
-
(2011)
J. Struct. Biol.
, vol.173
, pp. 77-85
-
-
Stolken, M.1
Beck, F.2
Haller, T.3
Hegerl, R.4
Gutsche, I.5
-
46
-
-
42949089487
-
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
-
Trabuco L.G., Villa E., Mitra K., Frank J., Schulten K. Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structure 2008, 16:673-683.
-
(2008)
Structure
, vol.16
, pp. 673-683
-
-
Trabuco, L.G.1
Villa, E.2
Mitra, K.3
Frank, J.4
Schulten, K.5
-
47
-
-
34248583632
-
Allosteric signaling and a nuclear exit strategy: binding of UL25/UL17 heterodimers to DNA-Filled HSV-1 capsids
-
Trus B.L., Newcomb W.W., Cheng N., Cardone G., Marekov L., et al. Allosteric signaling and a nuclear exit strategy: binding of UL25/UL17 heterodimers to DNA-Filled HSV-1 capsids. Mol. Cell 2007, 26:479-489.
-
(2007)
Mol. Cell
, vol.26
, pp. 479-489
-
-
Trus, B.L.1
Newcomb, W.W.2
Cheng, N.3
Cardone, G.4
Marekov, L.5
-
48
-
-
0023067967
-
A new resolution criterion based on spectral signal-to-noise ratios
-
Unser M., Trus B.L., Steven A.C. A new resolution criterion based on spectral signal-to-noise ratios. Ultramicroscopy 1987, 23:39-51.
-
(1987)
Ultramicroscopy
, vol.23
, pp. 39-51
-
-
Unser, M.1
Trus, B.L.2
Steven, A.C.3
-
49
-
-
13844264472
-
Spectral signal-to-noise ratio and resolution assessment of 3D reconstructions
-
Unser M., Sorzano C.O., Thevenaz P., Jonic S., El-Bez C., et al. Spectral signal-to-noise ratio and resolution assessment of 3D reconstructions. J. Struct. Biol. 2005, 149:243-255.
-
(2005)
J. Struct. Biol.
, vol.149
, pp. 243-255
-
-
Unser, M.1
Sorzano, C.O.2
Thevenaz, P.3
Jonic, S.4
El-Bez, C.5
-
50
-
-
0023090371
-
Similarity measures between images
-
van Heel M. Similarity measures between images. Ultramicroscopy 1987, 48:95-100.
-
(1987)
Ultramicroscopy
, vol.48
, pp. 95-100
-
-
van Heel, M.1
|