De novo transcriptome analysis using 454 pyrosequencing of the Himalayan Mayapple, Podophyllum hexandrum

BMC Genomics

Volumn 14, Issue 1, 2013, Pages

  Bhattacharyya, Dipto ^a,b   Sinha, Ragini ^a   Hazra, Saptarshi ^a   Datta, Riddhi ^a   Chattopadhyay, Sharmila ^a  

^a INDIAN INSTITUTE OF CHEMICAL BIOLOGY   (India)

^b Chonbuk National University   (South Korea)

Author keywords

454 pyrosequencing; Podophyllotoxin biosynthesis; Podophyllum hexandrum; Transcriptome

Indexed keywords

COMPLEMENTARY DNA; MICRORNA; ORGANIC COMPOUND; PHENYLPROPANOID; PODOPHYLLOTOXIN; TRANSCRIPTION FACTOR; TRANSCRIPTOME; UNCLASSIFIED DRUG; MICROSATELLITE DNA; VEGETABLE PROTEIN;

ARTICLE; BARREL MEDIC; CALLUS CULTURE; CELL SUSPENSION; CONTIG MAPPING; CONTROLLED STUDY; DNA LIBRARY; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; GENETIC DATABASE; GENOME ANALYSIS; GENOME SIZE; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT CELL CULTURE; PLANT METABOLISM; PODOPHYLLUM HEXANDRUM; POPULUS TRICHOCARPA; PYROSEQUENCING; REFERENCE VALUE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RHIZOME; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; SIMPLE SEQUENCE REPEAT; TRANSCRIPTOMICS; CHEMISTRY; DNA SEQUENCE; GENE LIBRARY; GENETICS; HIGH THROUGHPUT SEQUENCING; METABOLISM; PLANT GENE; PODOPHYLLUM;

MEDICAGO TRUNCATULA; PODOPHYLLUM; POPULUS TRICHOCARPA; SINOPODOPHYLLUM HEXANDRUM;

CONTIG MAPPING; DATABASES, GENETIC; GENE EXPRESSION PROFILING; GENE LIBRARY; GENES, PLANT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICROSATELLITE REPEATS; PLANT PROTEINS; PODOPHYLLOTOXIN; PODOPHYLLUM; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS; TRANSCRIPTOME;

EID: 84886735331     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-748     Document Type: Article

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