-
1
-
-
79952432498
-
Identification of a salmonellosis outbreak by means of molecular sequencing
-
Lienau EK, Strain E, Wang C, Zheng J, Ottesen AR, et al. (2011) Identification of a salmonellosis outbreak by means of molecular sequencing. N Engl J Med 364: 981-982.
-
(2011)
N Engl J Med
, vol.364
, pp. 981-982
-
-
Lienau, E.K.1
Strain, E.2
Wang, C.3
Zheng, J.4
Ottesen, A.R.5
-
2
-
-
84886614689
-
Method of Identifying Diagnostic Characteristics for a Clade of Organisms
-
editor. United States
-
Lienau EK (2012) Method of Identifying Diagnostic Characteristics for a Clade of Organisms. In: Application, editor. United States.
-
(2012)
Application
-
-
Lienau, E.K.1
-
3
-
-
65549140696
-
Epistemological impacts of horizontal gene transfer on classification in microbiology
-
Bapteste E, Boucher Y, (2009) Epistemological impacts of horizontal gene transfer on classification in microbiology. Methods Mol Biol 532: 55-72.
-
(2009)
Methods Mol Biol
, vol.532
, pp. 55-72
-
-
Bapteste, E.1
Boucher, Y.2
-
4
-
-
34248396432
-
Global extent of horizontal gene transfer
-
Choi I-G, Kim S-H, (2007) Global extent of horizontal gene transfer. Proc Natl Acad Sci U S A 104: 4489-4494.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 4489-4494
-
-
Choi, I.-G.1
Kim, S.-H.2
-
5
-
-
16644395866
-
Does a tree-like phylogeny only exist at the tips in the prokaryotes?
-
Creevey CJ, Fitzpatrick DA, Philip GK, Kinsella RJ, O'Connell MJ, et al. (2004) Does a tree-like phylogeny only exist at the tips in the prokaryotes? Proceedings of the Royal Society of London Series B: Biological Sciences 271: 2551-2558.
-
(2004)
Proceedings of the Royal Society of London Series B: Biological Sciences
, vol.271
, pp. 2551-2558
-
-
Creevey, C.J.1
Fitzpatrick, D.A.2
Philip, G.K.3
Kinsella, R.J.4
O'Connell, M.J.5
-
6
-
-
0033603539
-
Phylogenetic classification and the universal tree
-
Doolittle WF, (1999) Phylogenetic classification and the universal tree. Science 284: 2124-2129.
-
(1999)
Science
, vol.284
, pp. 2124-2129
-
-
Doolittle, W.F.1
-
7
-
-
77951163994
-
Is the microbial tree of life verificationist?
-
Lienau E, DeSalle R, (2010) Is the microbial tree of life verificationist? Cladistics 26: 195-201.
-
(2010)
Cladistics
, vol.26
, pp. 195-201
-
-
Lienau, E.1
DeSalle, R.2
-
8
-
-
79960152084
-
The mega matrix tree of life: using genome-scale horizontal gene transfer and sequence evolution data as information about the vertical history of life
-
Lienau KE, DeSalle R, Allard M, Brown EW, Swofford D, et al. (2011) The mega matrix tree of life: using genome-scale horizontal gene transfer and sequence evolution data as information about the vertical history of life. Cladistics 27: 417-427.
-
(2011)
Cladistics
, vol.27
, pp. 417-427
-
-
Lienau, K.E.1
DeSalle, R.2
Allard, M.3
Brown, E.W.4
Swofford, D.5
-
9
-
-
23044437168
-
What tangled web: barriers to rampant horizontal gene transfer
-
Kurland CG, (2005) What tangled web: barriers to rampant horizontal gene transfer. Bioessays 27: 741-747.
-
(2005)
Bioessays
, vol.27
, pp. 741-747
-
-
Kurland, C.G.1
-
10
-
-
79959292831
-
Vital signs: incidence and trends of infection with pathogens transmitted commonly through food-foodborne diseases active surveillance network, 10 U.S. sites, 1996-2010
-
Vital signs: incidence and trends of infection with pathogens transmitted commonly through food-foodborne diseases active surveillance network, 10 U.S. sites, 1996-2010. MMWR Morb Mortal Wkly Rep 60: 749-755.
-
MMWR Morb Mortal Wkly Rep
, vol.60
, pp. 749-755
-
-
-
11
-
-
78650979311
-
Foodborne illness acquired in the United States - major pathogens
-
Scallan E, Hoekstra RM, Angulo FJ, Tauxe RV, Widdowson MA, et al. (2011) Foodborne illness acquired in the United States - major pathogens. Emerg Infect Dis 17: 7-15.
-
(2011)
Emerg Infect Dis
, vol.17
, pp. 7-15
-
-
Scallan, E.1
Hoekstra, R.M.2
Angulo, F.J.3
Tauxe, R.V.4
Widdowson, M.A.5
-
12
-
-
0000941214
-
Designation of Salmonella enterica sp. nov., nom. rev., as the Type and Only Species of the Genus Salmonella: Request for an Opinion
-
Le Minor L, Popoff MY, (1987) Designation of Salmonella enterica sp. nov., nom. rev., as the Type and Only Species of the Genus Salmonella: Request for an Opinion. Int J Syst Bacteriol 37: 465-468.
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 465-468
-
-
Le Minor, L.1
Popoff, M.Y.2
-
13
-
-
0342378138
-
The record of horizontal gene transfer in Salmonella
-
Bäumler AJ, (1997) The record of horizontal gene transfer in Salmonella. Trends in microbiology 5: 318-322.
-
(1997)
Trends in Microbiology
, vol.5
, pp. 318-322
-
-
Bäumler, A.J.1
-
14
-
-
0031662669
-
Evolution of Host Adaptation inSalmonella enterica
-
Bäumler AJ, Tsolis RM, Ficht TA, Adams LG, (1998) Evolution of Host Adaptation inSalmonella enterica. Infection and Immunity 66: 4579-4587.
-
(1998)
Infection and Immunity
, vol.66
, pp. 4579-4587
-
-
Bäumler, A.J.1
Tsolis, R.M.2
Ficht, T.A.3
Adams, L.G.4
-
15
-
-
0033592595
-
Extraintestinal dissemination of Salmonella by CD18-expressing phagocytes
-
Vazquez-Torres A, Jones-Carson J, Baumler AJ, Falkow S, Valdivia R, et al. (1999) Extraintestinal dissemination of Salmonella by CD18-expressing phagocytes. Nature 401: 804-808.
-
(1999)
Nature
, vol.401
, pp. 804-808
-
-
Vazquez-Torres, A.1
Jones-Carson, J.2
Baumler, A.J.3
Falkow, S.4
Valdivia, R.5
-
16
-
-
84864059917
-
Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica
-
Achtman M, Wain J, Weill F-X, Nair S, Zhou Z, et al. (2012) Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica. PLoS Pathog 8: e1002776.
-
(2012)
PLoS Pathog
, vol.8
-
-
Achtman, M.1
Wain, J.2
Weill, F.-X.3
Nair, S.4
Zhou, Z.5
-
17
-
-
79960418330
-
Comparative Genomics of 28 Salmonella enterica Isolates: Evidence for CRISPR-Mediated Adaptive Sublineage Evolution
-
Fricke WF, Mammel MK, McDermott PF, Tartera C, White DG, et al. (2011) Comparative Genomics of 28 Salmonella enterica Isolates: Evidence for CRISPR-Mediated Adaptive Sublineage Evolution. Journal of Bacteriology 193: 3556-3568.
-
(2011)
Journal of Bacteriology
, vol.193
, pp. 3556-3568
-
-
Fricke, W.F.1
Mammel, M.K.2
McDermott, P.F.3
Tartera, C.4
White, D.G.5
-
18
-
-
84880072806
-
Evolutionary Genomics of Salmonella enterica Subspecies
-
Desai PT, Porwollik S, Long F, Cheng P, Wollam A, et al. (2013) Evolutionary Genomics of Salmonella enterica Subspecies. mBio 4.
-
(2013)
mBio
, vol.4
-
-
Desai, P.T.1
Porwollik, S.2
Long, F.3
Cheng, P.4
Wollam, A.5
-
19
-
-
80052889924
-
The Salmonella enterica Pan-genome
-
Jacobsen A, Hendriksen R, Aaresturp F, Ussery D, Friis C, (2011) The Salmonella enterica Pan-genome. Microbial Ecology 62: 487-504.
-
(2011)
Microbial Ecology
, vol.62
, pp. 487-504
-
-
Jacobsen, A.1
Hendriksen, R.2
Aaresturp, F.3
Ussery, D.4
Friis, C.5
-
20
-
-
80052337291
-
Salmonella bongori Provides Insights into the Evolution of the Salmonellae
-
Fookes M, Schroeder GN, Langridge GC, Blondel CJ, Mammina C, et al. (2011) Salmonella bongori Provides Insights into the Evolution of the Salmonellae. PLoS Pathog 7: e1002191.
-
(2011)
PLoS Pathog
, vol.7
-
-
Fookes, M.1
Schroeder, G.N.2
Langridge, G.C.3
Blondel, C.J.4
Mammina, C.5
-
21
-
-
33747341087
-
Reciprocal illumination in the gene content tree of life
-
Lienau EK, DeSalle R, Rosenfeld JA, Planet PJ, (2006) Reciprocal illumination in the gene content tree of life. Syst Biol 55: 441-453.
-
(2006)
Syst Biol
, vol.55
, pp. 441-453
-
-
Lienau, E.K.1
DeSalle, R.2
Rosenfeld, J.A.3
Planet, P.J.4
-
22
-
-
79960152084
-
The Mega-MatrixTree of Life: Using genome-scale horizontal gene transfer and sequence evolution data as information about the vertical history of life
-
at press
-
Lienau EK, DeSalle R, Rosenfeld JA, Allard MW, Swofford D, et al. (2011) The Mega-MatrixTree of Life: Using genome-scale horizontal gene transfer and sequence evolution data as information about the vertical history of life. Cladistics at press.
-
(2011)
Cladistics
-
-
Lienau, E.K.1
DeSalle, R.2
Rosenfeld, J.A.3
Allard, M.W.4
Swofford, D.5
-
23
-
-
0031662669
-
Evolution of host adaptation in Salmonella enterica
-
Bäumler AJ, Tsolis RM, Ficht TA, Adams LG, (1998) Evolution of host adaptation in Salmonella enterica. Infect Immun 66: 4579-4587.
-
(1998)
Infect Immun
, vol.66
, pp. 4579-4587
-
-
Bäumler, A.J.1
Tsolis, R.M.2
Ficht, T.A.3
Adams, L.G.4
-
24
-
-
0033592595
-
Extraintestinal dissemination of Salmonella by CD18-expressing phagocytes
-
Vazquez-Torres A, Jones-Carson J, Baumler AJ, Falkow S, Valdivia R, et al. (1999) Extraintestinal dissemination of Salmonella by CD18-expressing phagocytes. Nature 401: 804-808.
-
(1999)
Nature
, vol.401
, pp. 804-808
-
-
Vazquez-Torres, A.1
Jones-Carson, J.2
Baumler, A.J.3
Falkow, S.4
Valdivia, R.5
-
25
-
-
33747341087
-
Reciprocal illumination in the gene content tree of life
-
Lienau EK, DeSalle R, Rosenfeld JA, Planet PJ, (2006) Reciprocal illumination in the gene content tree of life. Syst Biol 55: 441-453.
-
(2006)
Syst Biol
, vol.55
, pp. 441-453
-
-
Lienau, E.K.1
DeSalle, R.2
Rosenfeld, J.A.3
Planet, P.J.4
-
27
-
-
45749115738
-
Toward an online repository of Standard Operating Procedures (SOPs) for (meta) genomic annotation
-
Angiuoli SV, Gussman A, Klimke W, Cochrane G, Field D, et al. (2008) Toward an online repository of Standard Operating Procedures (SOPs) for (meta) genomic annotation. OMICS 12: 137-141.
-
(2008)
OMICS
, vol.12
, pp. 137-141
-
-
Angiuoli, S.V.1
Gussman, A.2
Klimke, W.3
Cochrane, G.4
Field, D.5
-
29
-
-
11144358140
-
PRAP - computation of Bremer support for large data sets
-
Müller K, (2004) PRAP - computation of Bremer support for large data sets. Molecular Phylogenetics and Evolution 31: 780-782.
-
(2004)
Molecular Phylogenetics and Evolution
, vol.31
, pp. 780-782
-
-
Müller, K.1
-
30
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl Acids Res 32: 1792-1797.
-
(2004)
Nucl Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
31
-
-
84963036271
-
Quantitative Phyletics and the Evolution of Anurans
-
Kluge A, (1969) Quantitative Phyletics and the Evolution of Anurans. Systematic Zoology 18: 1-32.
-
(1969)
Systematic Zoology
, vol.18
, pp. 1-32
-
-
Kluge, A.1
|