Molecular characterization of a glycosyl hydrolase family 10 xylanase from Aspergillus niger

Protein Expression and Purification

Volumn 92, Issue 2, 2013, Pages 196-202

  Do, Thi Tuyen ^a   Quyen, Dinh Thi ^a,b   Nguyen, Thi Nuong ^a   Nguyen, Van Thuat ^a  

^a INSTITUTE OF BIOTECHNOLOGY   (Viet Nam)

^b HanoiUniversity of Science and Technology   (Viet Nam)

Author keywords

Aspergillus niger DSM 1957; Cloning; Expression; Glycosyl hydrolase family 10 xylanase; Properties

Indexed keywords

DETERGENT; ENDO 1,4 BETA XYLANASE; METAL; RECOMBINANT PROTEIN; SOLVENT;

ARTICLE; ASPERGILLUS NIGER; ASPERGILLUS NIGER DSM 1957; CHEMISTRY; CLONING; DRUG EFFECT; ENZYME SPECIFICITY; ENZYMOLOGY; ESCHERICHIA COLI; EXPRESSION; GENETICS; GLYCOSYL HYDROLASE FAMILY 10 XYLANASE; HYDROLYSIS; METABOLISM; MOLECULAR CLONING; PH; PROPERTIES; TEMPERATURE;

ASPERGILLUS NIGER DSM 1957; CLONING; EXPRESSION; GLYCOSYL HYDROLASE FAMILY 10 XYLANASE; PROPERTIES;

ASPERGILLUS NIGER; CLONING, MOLECULAR; DETERGENTS; ENDO-1,4-BETA XYLANASES; ESCHERICHIA COLI; HYDROGEN-ION CONCENTRATION; HYDROLYSIS; METALS; RECOMBINANT PROTEINS; SOLVENTS; SUBSTRATE SPECIFICITY; TEMPERATURE;

EID: 84886561635     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pep.2013.09.011     Document Type: Article

References (34)

1. T. Collins, C. Gerday, and G. Feller Xylanases, xylanase families and extremophilic xylanases FEMS Microbiol. Rev. 29 2005 3 23 (Pubitemid 40103579)
2. J.Q. Wang, X. Yin, M.C. Wu, H.M. Zhang, S.J. Gao, J.T. Wei, C.D. Tang, and J.F. Li Expression of a family 10 xylanase gene from Aspergillus usamii E001 in Pichia pastoris and characterization of the recombinant enzyme J. Ind. Microbiol. Biotechnol. 40 2013 75 83
3. M. Ayyachamy, and T.M. Vatsala Production and partial characterization of cellulase free xylanase by Bacillus subtilis C 01 using agriresidues and its application in biobleaching of nonwoody plant pulps Lett. Appl. Microbiol. 45 2007 467 472 (Pubitemid 47624012)
4. I. Romanowska, J. Polak, and S. Bielecki Isolation and properties of Aspergillus niger IBT-90 xylanase for bakery Appl. Microbiol. Biotechnol. 69 2006 665 671 (Pubitemid 43130573)
5. M.L. Polizeli, A. Rizzatti, R. Monti, H.F. Terenzi, J.A. Jorge, and D.S. Amorim Xylanases from fungi: properties and industrial applications Appl. Microbiol. Biotechnol. 67 2005 577 591 (Pubitemid 40903124)
6. R.J. Bernier, M. Desrochers, L. Jurasek, and M.G. Paice Isolation and characterization of a xylanase from Bacillus subtilis Appl. Environ. Microbiol. 46 1983 511 514
7. B. Korona, D. Korona, and S. Bielecki Efficient expression and secretion of two co-produced xylanases from Aspergillus niger in Pichia pastoris directed by their native signal peptides and the Saccharomyces cerevisiae a-mating factor Enzyme Microb. Technol. 39 2006 683 689
8. V. Ruanglek, R. Sriprang, N. Ratanaphan, P. Tirawongsaroj, D. Chantasigh, S. Tanapongpipat, K. Pootanakit, and L. Eurwilaichitr Cloning, expression, characterization, and high cell-density production of recombinant endo-1,4-β-xylanase from Aspergillus niger in Pichia pastoris Enzyme Microb. Technol. 41 2007 19 25 (Pubitemid 46729536)
9. A. Krisana, S. Rutchadaporn, G. Jarupan, E. Lily, T. Sutipa, and K. Kanyawim Endo-1,4-β-xylanase B from Aspergillus cf. niger BCC14405 isolated in Thailand: purification, characterization and gene isolation J. Biochem. Mol. Biol. 38 2005 17 23 (Pubitemid 43025973)
10. M. Luttig, I.S. Pretorius, and W.H. Zyl Cloning of two beta-xylanase-encoding genes from Aspergillus niger and their expression in Saccharomyces cerevisiae Biotechnol. Lett. 19 1997 411 415 (Pubitemid 27243843)
11. P. Deng, D. Li, Y. Cao, W. Lu, and C. Wang Cloning of a gene encoding an acidophilic endo-β-1,4-xylanase obtained from Aspergillus niger CGMCC1067 and constitutive expression in Pichia pastoris Enzyme Microb. Technol. 39 2006 1096 1102 (Pubitemid 44062662)
12. M.Q. Liu, X.Y. Weng, and J.Y. Sun Expression of recombinant Aspergillus niger xylanase A in Pichia pastoris and its action on xylan Protein Expr. Purif. 48 2006 292 299
13. P. Biely, M. Vrsanska, M. Tenkanen, and D. Kluepfel Endo-beta-1,4- xylanase families: differences in catalytic properties J. Biotechnol. 57 1997 151 166 (Pubitemid 27397479)
14. D. Chantasingh, K. Pootanakit, V. Champreda, P. Kanokratana, and L. Eurwilaichitr Cloning, expression, and characterization of a xylanase 10 from Aspergillus terreus (BCC129) in Pichia pastoris Protein Expr. Purif. 46 2006 143 149 (Pubitemid 43247007)
15. K. Ito, K. Iwashita, and K. Iwano Cloning and sequencing of the xynC gene encoding acid xylanase of Aspergillus kawachii Biosci. Biotechnol. Biochem. 56 1992 1338 1340
16. T. Kimura, H. Suzuki, H. Furahashi, T. Aburatani, K. Morimoto, K. Sakka, and K. Ohmiya Molecular cloning, charaterization, and expression analysis of the xynF3 gene from Aspergillus oryzae Biosci. Biotechnol. Biochem. 66 2002 285 292 (Pubitemid 39251048)
17. T.T. Do, S.L.T. Nguyen, and D.T. Quyen Optimization of some culture conditions for xylanase production by Aspergillus niger DSM1957 and Aspergillus oryzae DSM1863 Vietn. J. Biotechnol. 6 2008 349 355
18. T.T. Do, T.H. Dam, and D.T. Quyen Purification and characterization of a xylanase from Aspergillus niger DSM1957 Vietn. Sci. Technol. J. Agric. Rural Dev. 6 2009 16 21
19. T.H. Pham, D.T. Quyen, and N.M. Nghiem Cloning, expression, purification, and properties of an endoglucanase gene (glycosyl hydrolase family 12) from Aspergillus niger VTCC-F021 in Pichia pastoris J. Microbiol. Biotechnol. 21 2011 1012 1020
20. G.L. Miller Use of dinitrosalicylic acid reagent for determination of reducing sugars Anal. Chem. 31 1959 426 428
21. U.K. Laemmli Clevage of structure proteins during the assembly of the head of bacteriophage T4 Nature 227 1970 680 685
22. M.M. Bradford A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding Anal. Biochem. 72 1976 248 254
23. Y. Nishida, K. Suzuki, Y. Kumagai, H. Tanaka, A. Inoue, and T. Ojima Isolation and primary structure of a cellulase from the Japanese sea urchin Strongylocentrotus nudus Biochimie 89 2007 1002 1011 (Pubitemid 47031433)
24. X. Yi, Y. Shi, H. Xu, W. Li, J. Xie, R. Yu, J. Zhu, Y. Cao, and D. Qiao Hyperexpression of two Aspergillus niger xylanase genes in Escherichia coli and characterization of the gene products Brazil. J. Microbiol. 41 2010 778 786
25. S.L.T. Nguyen, and D.T. Quyen Cloning, sequence analysis of a gene encoding xylanase from Aspergillus niger DSM1957, The National Conference on Biotechnology 2009 2009 Thainguyen University Publisher Thainguyen 701 704
26. A. Marchler-Bauer, S. Lu, J.B. Anderson, F. Chitsaz, M.K. Derbyshire, C. DeWeese-Scott, J.H. Fong, L.Y. Geer, R.C. Geer, N.R. Gonzales, M. Gwadz, D.I. Hurwitz, J.D. Jackson, Z. Ke, C.J. Lanczycki, F. Lu, G.H. Marchler, M. Mullokandov, M.V. Omelchenko, C.L. Robertson, J.S. Song, N. Thanki, R.A. Yamashita, D. Zhang, N. Zhang, C. Zheng, and S.H. Bryant CDD: a conserved domain database for the functional annotation of proteins Nucleic Acids Res. 39 2011 D225 229
27. K. Julenius, A. Mølgaard, R. Gupta, and S. Brunak Prediction, conservation analysis and structural characterization of mammalian mucin-type O-glycosylation sites Glycobiology 15 2005 153 164 (Pubitemid 40227920)
28. M. Wakiyama, H. Tanaka, K. Yoshihara, S. Hayashi, and K. Ohta Purification and properties of family-10 endo-1,4-beta-xylanase from Penicillium citrinum and structural organization of encoding gene J. Biosci. Bioeng. 105 2008 367 374 (Pubitemid 351680735)
29. Y. Cao, J. Qiao, Y. Li, and W. Lu De novo synthesis, constitutive expression of Aspergillus sulphureus beta-xylanase gene in Pichia pastoris and partial enzymic characterization Appl. Microbiol. Biotechnol. 76 2007 579 585 (Pubitemid 47283129)
30. A. Hmida-Sayari, S. Taktek, F. Elgharbi, and S. Bejar Biochemical characterization, cloning and molecular modeling of a detergent and organic solvent-stable family 11 xylanase from the newly isolated Aspergillus niger US368 strain Process Biochem. 47 2012 1839 1847
31. J. Cheng, H. Saigo, and P. Baldi Large-scale prediction of disulphide bridges using kernel methods, two-dimensional recursive neural networks, and weighted graph matching Proteins 62 2006 617 629 (Pubitemid 43191249)
32. I. Kimura, H. Oshima, H. Sasahara, Y. Kimura, and S. Tajima Cloning, sequencing and expression analysis of an endo-1,4-beta-d-xylanase gene from Aspergillus sojae J. Appl. Glycosci. 51 2004 237 240 (Pubitemid 39245334)
33. C. Zhou, J. Bai, S. Deng, J. Wang, J. Zhu, M. Wu, and W. Wang Cloning of a xylanase gene from Aspergillus usamii and its expression in Escherichia coli Bioresour. Technol. 99 2008 831 838 (Pubitemid 350088445)
34. X. Chen, S. Xu, M. Zhu, L. Cui, H. Zhu, Y. Liang, and Z. Zhang Site-directed mutagenesis of an Aspergillus niger xylanase B and its expression, purification and enzymatic characterization in Pichia pastoris Process Biochem. 45 2010 75 80