Molecular characterization of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus)

Molecular Ecology

Volumn 22, Issue 21, 2013, Pages 5441-5455

  Kitson, James J N ^a   Warren, Ben H ^b   Vincent Florens, F B ^c   Baider, Claudia ^d,e   Strasberg, Dominique ^b   Emerson, Brent C ^a,f  

^a UNIVERSITY OF EAST ANGLIA   (United Kingdom)

^b UNIVERSITÉ DE LA RÉUNION   (France)

^c UNIVERSITY OF MAURITIUS   (Mauritius)

^d Mauritius Sugar Industry Research Institute   (Mauritius)

^e Mauritius Herbarium   (Mauritius)

^f INSTITUTO DE PRODUCTOS NATURALES Y AGROBIOLOGÍA   (Spain)

Author keywords

chloroplast; insect; plant; trophic ecology; weevil

Indexed keywords

COLEOPTERA; CURCULIONIDAE; ENTIMINAE; HEXAPODA;

MITOCHONDRIAL DNA;

ADAPTATION; ANIMAL; ARTICLE; BAYES THEOREM; CELL NUCLEUS; CHLOROPLAST; DIET; DNA SEQUENCE; ECOLOGY; ECOSYSTEM; GENETIC VARIABILITY; GENETICS; HAPLOTYPE; HERBIVORY; INSECT; ISLAND (GEOLOGICAL); MAURITIUS; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYLOGEOGRAPHY; PLANT; POPULATION GENETICS; TROPHIC ECOLOGY; WEEVIL;

CHLOROPLAST; INSECT; PLANT; TROPHIC ECOLOGY; WEEVIL;

ADAPTATION, BIOLOGICAL; ANIMALS; BAYES THEOREM; CELL NUCLEUS; DIET; DNA, MITOCHONDRIAL; ECOLOGY; ECOSYSTEM; GENETIC VARIATION; GENETICS, POPULATION; HAPLOTYPES; HERBIVORY; ISLANDS; MAURITIUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PHYLOGEOGRAPHY; SEQUENCE ANALYSIS, DNA; WEEVILS;

EID: 84886099763     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.12477     Document Type: Article

References (71)

1. Barat M, Tarayre M, Atlan A, (2008) Genetic divergence and ecological specialisation of seed weevils (Exapion spp.) on gorses (Ulex spp.). Ecological Entomology, 33, 328-336.
2. Barone JA, (1998) Host-specificity of folivorous insects in a moist tropical forest. Journal of Animal Ecology, 67, 400-409.
3. Cho SW, Mitchell A, Regier JC, et al,. (1995) A highly conserved nuclear gene for low-level phylogenetics-Elongation Factor-1-Alpha recovers morphologically-based tree for Heliothine moths. Molecular Biology and Evolution, 12, 650-656.
4. Cicconardi F, Nardi F, Emerson BC, Frati F, Fanciulli PP, (2010) Deep phylogeographic divisions and long-term persistence of forest invertebrates (Hexapoda: Collembola) in the North-Western Mediterranean basin. Molecular Ecology, 19, 386-400.
5. Clement M, Posada D, Crandall KA, (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1659.
6. Danforth BN, Lin CP, Fang J, (2005) How do insect nuclear ribosomal genes compare to protein-coding genes in phylogenetic utility and nucleotide substitution patterns? Systematic Entomology, 30, 549-562.
7. Deagle BE, Kirkwood R, Jarman SN, (2009) Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces. Molecular Ecology, 18, 2022-2038.
8. Dethier VG, (1954) Evolution of feeding preferences in phytophagous insects. Evolution, 8, 33-54.
9. Dmitriev DA, Rakitov RA, (2008) Decoding of superimposed traces produced by direct sequencing of heterozygous indels. Plos Computational Biology, 4, doi: 10.1371/journal.pcbi.1000113.
10. Don RH, Cox PT, Wainwright BJ, Baker K, Mattick JS, (1991) 'Touchdown' PCR to circumvent spurious priming during gene amplification. Nucleic Acids Research, 19, 4008.
11. Drummond AJ, Ho SYW, Phillips MJ, Rambaut A, (2006) Relaxed phylogenetics and dating with confidence. PLoS Biology, 4, e88.
12. Drummond A, Ashton B, Buxton S, et al,. (2011) Geneious v5.4, Available from http://www.geneious.com/.
13. Excoffier L, Lischer HEL, (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564-567.
14. Farrell BD, (1998) "Inordinate fondness" explained: why are there so many beetles? Science, 281, 555-559.
15. Fox LR, Morrow PA, (1981) Specialization: species property or local phenomenon? Science, 211, 887-893.
16. García-Robledo C, Erickson DL, Staines CL, Erwin TL, Kress WJ, (2013) Tropical plant-herbivore networks: reconstructing species interactions using DNA barcodes. PLoS One, 8, e52967.
17. Gillespie RG, Claridge EM, Goodacre SL, (2008) Biogeography of the fauna of French Polynesia: diversification within and between a series of hot spot archipelagos. Philosophical Transactions of the Royal Society B-Biological Sciences, 363, 3335-3346.
18. Grobler GC, van Rensburg LJ, Bastos ADS, Chimimba CT, Chown SL, (2006) Molecular and morphometric assessment of the taxonomic status of Ectemnorhinus weevil species (Coleoptera: Curculionidae, Entiminae) from the sub-Antarctic Prince Edward Islands. Journal of Zoological Systematics and Evolutionary Research, 44, 200-211.
19. Hereward JP, Walter GH, (2012) Molecular interrogation of the feeding behaviour of field captured individual insects for interpretation of multiple host plant use. PLoS One, 7, e44435.
20. Hernandez-Vera G, Mitrovic M, Jovic J, et al,. (2010) Host-associated genetic differentiation in a seed parasitic weevil Rhinusa antirrhini (Coleptera: Curculionidae) revealed by mitochondrial and nuclear sequence data. Molecular Ecology, 19, 2286-2300.
21. Ho SYW, Larson G, Edwards CJ, et al,. (2008) Correlating Bayesian date estimates with climatic events and domestication using a bovine case study. Biology Letters, 4, 370-374.
22. Holland BS, Hadfield MG, (2002) Islands within an island: phylogeography and conservation genetics of the endangered Hawaiian tree snail Achatinella mustelina. Molecular Ecology, 11, 365-375.
23. Huelsenbeck JP, Ronquist F, (2001) MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics, 17, 754-755.
24. Jeffries MJ, Lawton JH, (1984) Enemy free space and the structure of ecological communities. Biological Journal of the Linnean Society, 23, 269-286.
25. Ji YJ, Zhang DX, He LJ, (2003) Evolutionary conservation and versatility of a new set of primers for amplifying the ribosomal internal transcribed spacer regions in insects and other invertebrates. Molecular Ecology Notes, 3, 581-585.
26. Jordal BH, Kirkendall LR, Harkestad K, (2004) Phylogeny of a Macaronesian radiation: host-plant use and possible cryptic speciation in Liparthrum bark beetles. Molecular Phylogenetics and Evolution, 31, 554-571.
27. Jordal BH, Emerson BC, Hewitt GM, (2006) Apparent 'sympatric' speciation in ecologically similar herbivorous beetles facilitated by multiple colonizations of an island. Molecular Ecology, 15, 2935-2947.
28. Jurado-Rivera JA, Vogler AP, Reid CAM, Petitpierre E, Gomez-Zurita J, (2009) DNA barcoding insect-host plant associations. Proceedings of the Royal Society B: Biological Sciences, 276, 639-648.
29. Katoh K, Misawa K, Kuma K, Miyata T, (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30, 3059-3066.
30. Librado P, Rozas J, (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics, 25, 1451-1452.
31. Machado A, (2006) The type material of the species of Laparocerus Schonherr, 1834 (Coleoptera, Curculionidae, Entiminae). Journal of Natural History, 40, 2001-2055.
32. Machado A, (2007a) New species of Laparocerus Schonherr, 1834 (Coleoptera, Curculionidae) from the island of Tenerife (Canary Islands). Zootaxa, 1457, 35-48.
33. Machado A, (2007b) New species of Laparocerus Schonherr, 1834 from La Gomera, Canary Islands (Coleoptera, Curculionidae, Entiminae). Zootaxa, 1643, 1-38.
34. Machado A, (2008) Three new endogean species of Laparocerus Schonherr, 1834 from the Canary Islands (Coleoptera, Curculionidae). Journal of Natural History, 42, 1277-1288.
35. Machado A, Lopez M, Almeida T, Hernandez M, (2008) Mitochondrial DNA phylogenetic analysis of the genus Laparocerus (Coleoptera, Curculionidae, Entiminae). 1 The madeiran clade. Zoologica Scripta, 37, 415-427.
36. Martin DP, Lemey P, Lott M, et al,. (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics, 26, 2462-2463.
37. McCulloch GA, Wallis GP, Waters JM, (2009) Do insects lose flight before they lose their wings? Population genetic structure in subalpine stoneflies. Molecular Ecology, 18, 4073-4087.
38. McKenna DD, Sequeira AS, Marvaldi AE, Farrell BD, (2009) Temporal lags and overlap in the diversification of weevils and flowering plants. Proceedings of the National Academy of Sciences of the United States of America, 106, 7083-7088.
39. Minin VN, Dorman KS, Fang F, Suchard MA, (2005) Dual multiple change-point model leads to more accurate recombination detection. Bioinformatics, 21, 3034-3042.
40. Morris MG, (1997) Broad-Nosed Weevils, Handbooks for the identification of British Insects, Vol 5 Part 17a, Royal Entomological Society, London.
41. Munch K, Boomsma W, Huelsenbeck JP, Willerslev E, Nielsen R, (2008) Statistical assignment of DNA sequences using Bayesian phylogenetics. Systematic Biology, 57, 750-757.
42. Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GAB, Kent J, (2000) Biodiversity hotspots for conservation priorities. Nature, 403, 853-858.
43. Novotny V, Basset Y, Miller SE, et al,. (2002) Low host specificity of herbivorous insects in a tropical forest. Nature, 416, 841-844.
44. Novotny V, Drozd P, Miller SE, et al,. (2006) Why are there so many species of herbivorous insects in tropical rainforests? Science, 313, 1115-1118.
45. Oberprieler RG, Marvaldi AE, Anderson RS, (2007) Weevils, weevils, weevils everywhere. Zootaxa, 1668, 491-520.
46. Ødegaard F, Diserud OH, Østbye K, (2005) The importance of plant relatedness for host utilization among phytophagous insects. Ecology Letters, 8, 612-617.
47. Otte D, (1976) On feeding patterns in desert grasshoppers and the evolution of specialized diets. Proceedings of the Academy of Natural Sciences of Philadelphia, 128, 89-126.
48. Pinzõn-Navarro S, Jurado-Rivera JA, Gõmez-Zurita J, Lyal CHC, Vogler AP, (2010) DNA profiling of host-herbivore interactions in tropical forests. Ecological Entomology, 35, 18-32.
49. Podlussany A, Jermy T, Szentesi A, (2001) On the leguminous host plants of seed predator weevils (Coleoptera: Apionidae, Curculionidae) in Hungary. Acta Zoologica Academiae Scientiarum Hungaricae, 47, 285-299.
50. Posada D, (2008) jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253-1256.
51. R Development Core Team (2010) R: A Language and Environment for Statistical Computing. R Development Core Team, Vienna, Austria.
52. Rambaut A, (2011) FigTree v1.3.1, Available from http://tree.bio.ed.ac. uk/software/figtree/.
53. Rambaut A, Drummond A, (2007) Tracer v1.5.0, Available from http://beast.bio.ed.ac.uk/Tracer.
54. Regier JC, Shi D, (2005) Increased yield of PCR product from degenerate primers with nondegenerate, nonhomologous 5 'tails. BioTechniques, 38, 34.
55. Roff DA, (1990) The evolution of flightlessness in insects. Ecological Monographs, 60, 389-421.
56. Schoener TW, (1968) The anolis lizards of Bimini: resource partitioning in a complex fauna. Ecology, 49, 704-726.
57. Sequeira AS, Lanteri AA, Albelo R, Bhattacharya S, Sijapati M, (2008) Colonization history, ecological shifts and diversification in the evolution of endemic Galapagos weevils. Molecular Ecology, 17, 1089-1107.
58. Singer MS, Bernays EA, Carrière Y, (2002) The interplay between nutrient balancing and toxin dilution in foraging by a generalist insect herbivore. Animal Behaviour, 64, 629-643.
59. Staudacher K, Wallinger C, Schallhart N, Traugott M, (2011) Detecting ingested plant DNA in soil-living insect larvae. Soil Biology and Biochemistry, 43, 346-350.
60. Stephens M, Scheet P, (2005) Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputation. American Journal of Human Genetics, 76, 449-462.
61. Stephens M, Smith NJ, Donnelly P, (2001) A new statistical method for haplotype reconstruction from population data. American Journal of Human Genetics, 68, 978-989.
62. Taberlet P, Coissac E, Pompanon F, et al,. (2007) Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Research, 35, Article No.: e14.
63. Tamura K, Peterson D, Peterson N, et al,. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731-2739.
64. The Angiosperm Phylogeny Group (2009) An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society, 161, 105-121.
65. Tilmon KJ, (2008) Specialization, Speciation, and Radiation. The Evolutionary Biology of Herbivorous Insects. University of California Press, Los Angeles, California.
66. Wallace RK, (1981) An Assessment of Diet-Overlap Indexes. Transactions of the American Fisheries Society, 110, 72-76.
67. Wallace RK, Ramsey JS, (1983) Reliability in measuring diet overlap. Canadian Journal of Fisheries and Aquatic Sciences, 40, 347-351.
68. Warren BH, Strasberg D, Bruggemann JH, Prys-Jones RP, Thébaud C, (2010) Why does the biota of the Madagascar region have such a strong Asiatic flavour? Cladistics, 26, 526-538.
69. Williams JR, (2000) A revision of the Mascarene weevil genus Syzygops Schonherr (Coleoptera: Curculionidae: Entiminae). Invertebrate Taxonomy, 14, 411-432.
70. Williams JR, Cox ML, (2003) A Contribution to the study of Mascarene Weevils of the genus Cratopus Schonherr (Coleoptera: Curculionidae: Entiminae: Cratopini): the species of Mauritius and Rodrigues. The Mauritius Institute Bulletin, 12, 1-67.
71. Zera AJ, Denno RF, (1997) Physiology and ecology of dispersal polymorphism in insects. Annual Review of Entomology, 42, 207-230.