-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
-
2
-
-
0036795810
-
Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants
-
Araujo WL, Marcon J, Maccheroni W, Jr., Van Elsas JD, et al. (2002). Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants. Appl. Environ. Microbiol. 68: 4906-4914.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 4906-4914
-
-
Araujo, W.L.1
Marcon, J.2
Maccheroni Jr., W.3
van Elsas, J.D.4
-
3
-
-
0022629490
-
Characterization of Herbaspirillum seropedicae gen. nov., sp. nov., a root-associated nitrogen fixing bacterium
-
Baldani JI, Baldani VLD, Seldin L and Döbereiner J (1986). Characterization of Herbaspirillum seropedicae gen. nov., sp. nov., a root-associated nitrogen fixing bacterium. Int. J. Syst. Bacteriol. 36: 86-93.
-
(1986)
Int. J. Syst. Bacteriol
, vol.36
, pp. 86-93
-
-
Baldani, J.I.1
Baldani, V.L.D.2
Seldin, L.3
Döbereiner, J.4
-
4
-
-
79955945454
-
Predominant nifH transcript phylotypes related to Rhizobium rosettiformans in field-grown sugarcane plants and in Norway spruce
-
Burbano CS, Liu Y, Rosner KL, Reis VM, et al. (2011). Predominant nifH transcript phylotypes related to Rhizobium rosettiformans in field-grown sugarcane plants and in Norway spruce. Environ. Microbiol. Rep. 3: 383-389.
-
(2011)
Environ. Microbiol. Rep
, vol.3
, pp. 383-389
-
-
Burbano, C.S.1
Liu, Y.2
Rosner, K.L.3
Reis, V.M.4
-
5
-
-
0002563277
-
A new acid-tolerant nitrogen-fixing bacterium associated with sugarcane
-
Cavalcante VA and Döbereiner J (1988). A new acid-tolerant nitrogen-fixing bacterium associated with sugarcane. Plant Soil 108: 23-21.
-
(1988)
Plant Soil
, vol.108
, pp. 21-23
-
-
Cavalcante, V.A.1
Döbereiner, J.2
-
6
-
-
58149200948
-
The Ribosomal Database Project: Improved alignments and new tools for rRNA analysis
-
Cole JR, Wang Q, Cardenas E, Fish J, et al. (2009). The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37: D141-D145.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
-
7
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing B, Hillier L, Wendl MC and Green P (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8: 175-185.
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
8
-
-
84862645577
-
Molecular characterization of the diazotrophic bacterial community in uninoculated and inoculated field-grown sugarcane (Saccharum sp.)
-
Fischer D, Pfitzner B, Schmid M and Simões-Araujo JL (2011). Molecular characterization of the diazotrophic bacterial community in uninoculated and inoculated field-grown sugarcane (Saccharum sp.). Plant Soil 356: 83-99.
-
(2011)
Plant Soil
, vol.356
, pp. 83-99
-
-
Fischer, D.1
Pfitzner, B.2
Schmid, M.3
Simões-Araujo, J.L.4
-
9
-
-
0032080593
-
Diversity of root-associated bacteria associated with field-grown canola (Brassica napus L.) and wheat (Tritricum aestivum L.)
-
Germida JJ, Siciliano SD, Freitas R and Seib AM (1998). Diversity of root-associated bacteria associated with field-grown canola (Brassica napus L.) and wheat (Tritricum aestivum L.). FEMS Microbiol. Ecol. 26: 43-50.
-
(1998)
FEMS Microbiol. Ecol
, vol.26
, pp. 43-50
-
-
Germida, J.J.1
Siciliano, S.D.2
Freitas, R.3
Seib, A.M.4
-
10
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT
-
Hall TA (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucleic Acids Symposium Series 41: 95-98.
-
(1999)
Nucleic Acids Symposium Series
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
12
-
-
0034096733
-
Nitrogen fixation in endophytic and associative symbiosis
-
James EK (2000). Nitrogen fixation in endophytic and associative symbiosis. Field Crops Res. 65: 197-209.
-
(2000)
Field Crops Res
, vol.65
, pp. 197-209
-
-
James, E.K.1
-
13
-
-
10044231395
-
Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotion
-
Kuklinsky-Sobral J, Araujo WL, Mendes R, Geraldi IO, et al. (2004). Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotion. Environ. Microbiol. 6: 1244-1251.
-
(2004)
Environ. Microbiol
, vol.6
, pp. 1244-1251
-
-
Kuklinsky-Sobral, J.1
Araujo, W.L.2
Mendes, R.3
Geraldi, I.O.4
-
14
-
-
45949109669
-
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
-
Kumar S, Nei M, Dudley J and Tamura K (2008). MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 9: 299-306.
-
(2008)
Brief. Bioinform
, vol.9
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamura, K.4
-
15
-
-
0001857117
-
16S/23S rRNA Sequencing
-
(Stackebrandt E and Goodfellow M, eds.). John Wiley and Sons, New York
-
Lane DJ (1991). 16S/23S rRNA Sequencing. In: Nucleic acid Techniques in Bacterial Systematics (Stackebrandt E and Goodfellow M, eds.). John Wiley and Sons, New York, 115-175.
-
(1991)
Nucleic Acid Techniques In Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
16
-
-
77649253795
-
Diversity of endophytic bacteria in Brazilian sugarcane
-
Magnani GS, Didonet CM, Cruz LM, Picheth CF, et al. (2010). Diversity of endophytic bacteria in Brazilian sugarcane. Genet. Mol. Res. 9: 250-258.
-
(2010)
Genet. Mol. Res
, vol.9
, pp. 250-258
-
-
Magnani, G.S.1
Didonet, C.M.2
Cruz, L.M.3
Picheth, C.F.4
-
17
-
-
0036558999
-
The effect of inoculating endophytic N2 fixing bacteria on micropropagated sugarcane plants
-
Oliveira ALM, Urquiga S, Döbereiner J and Baldani JI (2002). The effect of inoculating endophytic N2 fixing bacteria on micropropagated sugarcane plants. Plant Soil 242: 205-215.
-
(2002)
Plant Soil
, vol.242
, pp. 205-215
-
-
Oliveira, A.L.M.1
Urquiga, S.2
Döbereiner, J.3
Baldani, J.I.4
-
18
-
-
77951961345
-
Prokaryotic community structure and diversity in the sediments of an active submarine mud volcano (Kazan mud volcano, East Mediterranean Sea)
-
Pachiadaki MG, Lykousis V, Stefanou EG and Kormas KA (2010). Prokaryotic community structure and diversity in the sediments of an active submarine mud volcano (Kazan mud volcano, East Mediterranean Sea). FEMS Microbiol. Ecol. 72: 429-444.
-
(2010)
FEMS Microbiol. Ecol
, vol.72
, pp. 429-444
-
-
Pachiadaki, M.G.1
Lykousis, V.2
Stefanou, E.G.3
Kormas, K.A.4
-
19
-
-
0021251214
-
Regulation of nitrogen fixation (nif) genes of Azospirillum brasilense by nifA and ntrC (glnG) type genes
-
Pedrosa FO and Yates MG (1984). Regulation of nitrogen fixation (nif) genes of Azospirillum brasilense by nifA and ntrC (glnG) type genes. FEMS Microbiol. Lett. 55: 95-101.
-
(1984)
FEMS Microbiol. Lett
, vol.55
, pp. 95-101
-
-
Pedrosa, F.O.1
Yates, M.G.2
-
20
-
-
34250674530
-
Plant-growth-promoting compounds produced by two agronomically important strains of Azospirillum brasilense, and implications for inoculant formulation
-
Perrig D, Boiero ML, Masciarelli OA, Penna C, et al. (2007). Plant-growth-promoting compounds produced by two agronomically important strains of Azospirillum brasilense, and implications for inoculant formulation. Appl. Microbiol. Biotechnol. 75: 1143-1150.
-
(2007)
Appl. Microbiol. Biotechnol
, vol.75
, pp. 1143-1150
-
-
Perrig, D.1
Boiero, M.L.2
Masciarelli, O.A.3
Penna, C.4
-
21
-
-
67349253602
-
The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.)
-
Prakamhang JK, Minamisawa K, Teamtaisong N and Boonkerd N (2009). The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.). Appl. Soil Ecol. 42: 141-159.
-
(2009)
Appl. Soil Ecol
, vol.42
, pp. 141-159
-
-
Prakamhang, J.K.1
Minamisawa, K.2
Teamtaisong, N.3
Boonkerd, N.4
-
23
-
-
0001201752
-
2-fixing bacteria associated with sugar cane (Saccharum sp.)
-
Rennie RJ, Freitas JR, Ruschel AP and Vose PB (1982). Isolation and identification of N2-fixing bacteria associated with sugar cane (Saccharum sp.). Can. J. Microbiol. 28: 462-467.
-
(1982)
Can. J. Microbiol
, vol.28
, pp. 462-467
-
-
Rennie, R.J.1
Freitas, J.R.2
Ruschel, A.P.3
Vose, P.B.4
-
24
-
-
37749001498
-
Biodiversity of diazotrophic bacteria within the soil, root and stem of field-grown maize
-
Roesch LFW, Camargo FAO, Bento FM and Triplett EW (2008). Biodiversity of diazotrophic bacteria within the soil, root and stem of field-grown maize. Plant Soil 302: 91-104.
-
(2008)
Plant Soil
, vol.302
, pp. 91-104
-
-
Roesch, L.F.W.1
Camargo, F.A.O.2
Bento, F.M.3
Triplett, E.W.4
-
26
-
-
58149396832
-
Endophytic diazotrophs: The latest weapon of an exotic invasive grass
-
Rout ME and Chrzanowski TH (2009). Endophytic diazotrophs: The latest weapon of an exotic invasive grass. Plant Soil 315: 163-172.
-
(2009)
Plant Soil
, vol.315
, pp. 163-172
-
-
Rout, M.E.1
Chrzanowski, T.H.2
-
27
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
Schloss PD and Handelsman J (2005). Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71: 1501-1506.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
28
-
-
0347358992
-
Comparative molecular analysis of Herbaspirillum strains by RAPD, RFLP, and 16S rDNA sequencing
-
Soares-Ramos J, Ramos HJO, Cruz LM and Chubatsu LS (2003). Comparative molecular analysis of Herbaspirillum strains by RAPD, RFLP, and 16S rDNA sequencing. Genet. Mol. Biol. 26: 537-543.
-
(2003)
Genet. Mol. Biol
, vol.26
, pp. 537-543
-
-
Soares-Ramos, J.1
Ramos, H.J.O.2
Cruz, L.M.3
Chubatsu, L.S.4
-
29
-
-
0035025503
-
Molecular assessment of diversity among endophytic diazotrophs isolated from subtropical Indian sugarcane
-
Suman A, Shasany AK, Singh M and Shahi HN (2001). Molecular assessment of diversity among endophytic diazotrophs isolated from subtropical Indian sugarcane. World J. Microbiol. Biotechol. 17: 39-45.
-
(2001)
World J. Microbiol. Biotechol
, vol.17
, pp. 39-45
-
-
Suman, A.1
Shasany, A.K.2
Singh, M.3
Shahi, H.N.4
-
30
-
-
41049117454
-
Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis
-
Sun L, Qiu F, Zhang X, Dai X, et al. (2008). Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis. Microb. Ecol. 55: 415-424.
-
(2008)
Microb. Ecol
, vol.55
, pp. 415-424
-
-
Sun, L.1
Qiu, F.2
Zhang, X.3
Dai, X.4
-
31
-
-
84862682267
-
The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community
-
Taulé C, Mareque C, Barlocco C and Hackembruch F (2012). The contribution of nitrogen fixation to sugarcane (Saccharum officinarum L.), and the identification and characterization of part of the associated diazotrophic bacterial community. Plant Soil 356: 35-49.
-
(2012)
Plant Soil
, vol.356
, pp. 35-49
-
-
Taulé, C.1
Mareque, C.2
Barlocco, C.3
Hackembruch, F.4
-
32
-
-
70349913612
-
Expressed nifH genes of endophytic bacteria detected in field-grown sweet potatoes (Ipamoeba batatas L.)
-
Terakado-Tonooka J, Ohwaki Y, Yamakoura H and Tanaka F (2008). Expressed nifH genes of endophytic bacteria detected in field-grown sweet potatoes (Ipamoeba batatas L.). Microbes Environ. 23: 89-93.
-
(2008)
Microbes Environ
, vol.23
, pp. 89-93
-
-
Terakado-Tonooka, J.1
Ohwaki, Y.2
Yamakoura, H.3
Tanaka, F.4
-
33
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG and Gibson TJ (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
34
-
-
34248529731
-
Diversity of cultivated and uncultivated actinobacterial endophytes in the stems and roots of rice
-
Tian X, Cao L, Tan H, Han W, et al. (2007). Diversity of cultivated and uncultivated actinobacterial endophytes in the stems and roots of rice. Microb. Ecol. 53: 700-707.
-
(2007)
Microb. Ecol
, vol.53
, pp. 700-707
-
-
Tian, X.1
Cao, L.2
Tan, H.3
Han, W.4
-
35
-
-
0031737291
-
A natural view of microbial biodiversity within hot spring cyanobacterial mat communities
-
Ward DM, Ferris MJ, Nold SC and Bateson MM (1998). A natural view of microbial biodiversity within hot spring cyanobacterial mat communities. Microbiol. Mol. Biol. Ver. 62: 1353-1370.
-
(1998)
Microbiol. Mol. Biol. Ver
, vol.62
, pp. 1353-1370
-
-
Ward, D.M.1
Ferris, M.J.2
Nold, S.C.3
Bateson, M.M.4
|