Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants

Applied and Environmental Microbiology

Volumn 68, Issue 10, 2002, Pages 4906-4914

  Araújo, Welington L ^a   Marcon, Joelma ^a   Maccheroni Jr , Walter ^a   Van Elsas, Jan Dirk ^a   Van Vuurde, Jim W L ^a   Azevedo, João Lúcio ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

CULTIVATION; DNA; ELECTROPHORESIS; ESTERS; FATTY ACIDS; GELS; GENES; PLANTS (BOTANY); RNA;

BACTERIAL COMMUNITIES;

BACTERIA;

BACTERIUM; CROP PEST; ENDOPHYTE; PATHOGEN;

ARTICLE; BACTERIAL COLONIZATION; BACTERIAL GROWTH; BACTERIUM CULTURE; BACTERIUM ISOLATION; BIODIVERSITY; BIOLOGICAL PEST CONTROL; CHLOROSIS; CITRUS FRUIT; DENATURING GRADIENT GEL ELECTROPHORESIS; ENDOPHYTE; HAPLOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; RNA GENE;

BACILLUS CEREUS; BACTERIAL TYPING TECHNIQUES; CITRUS; DNA, BACTERIAL; DRUG RESISTANCE, BACTERIAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; GAMMAPROTEOBACTERIA; PLANT DISEASES; PLANT LEAVES; RNA, RIBOSOMAL, 16S;

BACILLUS PUMILUS; BACTERIA (MICROORGANISMS); CITRUS; CITRUS RETICULATA; CITRUS SINENSIS; CURTOBACTERIUM FLACCUMFACIENS; ENTEROBACTER; ENTEROBACTER CLOACAE; METHYLOBACTERIUM EXTORQUENS; METHYLOBACTERIUM FUJISAWAENSE; METHYLOBACTERIUM MESOPHILICUM; METHYLOBACTERIUM RADIOTOLERANS; METHYLOBACTERIUM ZATMANII; NOCARDIA; NOCARDIA SP.; PANTOEA; PANTOEA AGGLOMERANS; PUMILUS; XANTHOMONAS; XANTHOMONAS CAMPESTRIS; XYLELLA FASTIDIOSA;

EID: 0036795810     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.10.4906-4914.2002     Document Type: Article

References (40)

1. Abdoulaye, S. Y., E. Giraud, P. Jourand, N. Garcia, A. Willems, P. de Lajudie, Y. Prin, M. Neyra, M. Gillis, C. Bivin-Masson, and B. Dreyfus. 2001. Methylotrophic Methylobacterium bacteria nodulate and fix nitrogen in symbiosis with legumes. J. Bacteriol. 183:214-220.
2. Araújo, W. L., H. O. Saridakis, P. A. V. Barroso, C. I. Aguilar-Vildoso, and J. L. Azevedo. 2001. Variability and interactions between endophytic bacteria and fungi isolated from leaf tissues of citrus rootstocks. Can. J. Microbiol. 47:229-236.
3. Azevedo, J. L., W. Maccheroni, Jr., J. O. Pereira, and W. L. Araújo. 15 April 2000, posting date. Endophytic microorganisms: a review on insect control and recent advances on tropical plants. Bio/Technology 3:40-65. [Online.] http://www.org/content/vol3/issue1/full/3/4.
4. Bent, E., and C. P. Chanway. 1998. The growth-promoting effects of a bacterial endophyte on lodgepole pine are partially inhibited by the presence of other rhizobacteria. Can. J. Microbiol. 44:980-988.
5. Chang, C. J., M. Garnier, L. Zreik, V. Rossetti, and J. M. Bove. 1993. Culture and serological detection of the xylem-limited bacterium causing citrus variegated chlorosis and its identification as a strain of Xylella fastidiosa. Curr. Microbiol. 27:137-142.
6. Chanway, C. P. 1997. Inoculation of tree roots with plant growth promoting soil bacteria: an emerging technology for reforestation. Forest Sci. 43:99-112.
7. Childs, J. F. L., L. E. Kopp, and R. E. Johnson. 1965. A species of Physoderma present in citrus and related species. Phytopathology 55:681-687.
8. Duijff, B. J., V. Gianinazzi-Pearsonand, and P. Lemanceau. 1997. Involvement of the outer membrane lipopolysaccharides in the endophytic colonization of tomato roots by biocontrol Pseudomonas fluorescens strain WCS417r. New Phytol. 135:325-334.
9. Fisher, P. J., O. Petrini, and H. M. L. Scott. 1992. The distribution of some fungal and bacterial endophytes in maize (Zea mays L.). New Phytol. 122:299-305.
10. Garbeva, P., L. S. van Overbeek, J. W. L. van Vuurde, and J. D. van Elsas. 2001. Analysis of endophytic bacterial communities of potato by plating and denaturing gradient gel electrophoresis (DGGE) of 16S rDNA based PCR fragments. Microb. Ecol. 41:369-383.
11. Gardner, J. M., A. W. Feldman, and M. Zablotowicz. 1982. Identity and behavior of xylem-residing bacteria in rough lemon roots of Florida citrus trees. Appl. Environ. Microbiol. 43:1335-1342.
12. Gardner, J. M., J. A. Chandler, and A. W. Feldman. 1985. Growth response and vascular plugging of citrus inoculated with rhizobacteria and xylemresident bacteria. Plant Soil 86:996-1000.
13. Hallmann, J., A. Quadt-Hallmann, W. F. Mahaffee, and J. W. Kloepper. 1997. Bacterial endophytes in agricultural crops. Can. J. Microbiol. 43:895-914.
14. Hallmann, J., A. Quadt-Hallmann, R. Rodríguez-Kábana, and J. W. Kloepper. 1998. Interactions between Meloidogyne incognita and endophytic bacteria in cotton and cucumber. Soil Biol. Biochem. 30:925-937.
15. Hallmann, J., R. Rodríguez-Kábana, and J. W. Kloepper. 1999. Chitin-mediated changes in bacterial communities of the soil, rhizosphere and within roots of cotton in relation to nematode control. Soil Biol. Biochem. 31:551-560.
16. Hopkins, D. L. 1989. Xylella fastidiosa: xylem-limited bacterial pathogen of plants. Annu. Rev. Phytopathol. 27:271-290.
17. Krishnamurthy, K., and S. S. Gnanamanickam. 1997. Biological control of sheath blight of rice: induction of systemic resistance in rice by plant-associated Pseudomonas spp. Curr. Sci. 72:331-334.
18. Kuske, C. R., S. M. Barns, and J. D. Busch. 1997. Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions. Appl. Environ. Microbiol. 63:3614-3621.
19. Lambais, M. R., M. H. S. Goldman, L. E. A. Camargo, and G. H. Goldman. 2000. A genomic approach to the understanding of Xylella fastidiosa pathogenicity. Curr. Opin. Microbiol. 3:459-462.
20. Lazarovits, G., and J. Nowak. 1997. Rhizobacteria for improvement of plant growth and establishment. Hortscience 32:188-192.
21. Lee, R. F., K. S. Kerrick, M. J. G. Beretta, C. M. Chagas, and V. Rossetti. 1991. Citrus variegated chlorosis: a new destructive disease of citrus in Brazil. Citrus Ind. 72:12-13, 15.
22. Lima, G., A. Ippolito, F. Nigro, and M. Salerno. 1994. Attempts in the biological control of citrus mal secco (Phoma tracheiphila) using endophytic bacteria. Dif. Piante 17:43-49.
23. M'Piga, P., R. R. Bélanger, T. C. Paulitz, and N. Benhamou. 1997. Increased resistance to Fusarium oxysporum f. sp. radicis-licopersici in tomato plants treated with the endophytic bacterium Pseudomonas fluorescens strain 63-28. Physiol. Mol. Plant Pathol. 50:301-320.
24. Muyzer, G., E. C. de Waal, and A. Uitterlinden. 1993. Profiling of complex microbial populations using denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
25. Petrini, L. E., O. Petrini, and G. Laflamme. 1989. Recovery of endophytes of Abiens balsamea from needles and galls of Paradiplosis tumifex. Phytoprotection 70:97-103.
26. Pillay, V. J., and J. Nowak. 1997. Inoculum density, temperature and genotype effects on in vitro growth promotion and epiphytic and endophytic colonization of tomato (Lycopersicum esculentum L.) seedlings inoculated with a pseudomonad bacterium. Can. J. Microbiol. 43:354-361.
27. Pirttilä, A. M., H. Laukkane, H. Pospiech, R. Myllylä, and A. Hohtola. 2000. Detection of intracellular bacteria in buds of Scotch pine (Pinus sylvestris L.) by in situ hybridization. Appl. Environ. Microbiol. 66:3037-3077.
28. Pooler, M. R., and J. S. Hartung. 1995. Specific PCR detection and identification of Xylella fastidiosa strains causing citrus variegated chlorosis. Curt. Microbiol. 31:377-381.
29. Quadt-Hallmann, A., J. Hallmann, and J. W. Kloepper. 1997. Bacterial endophytes in cotton: localization and interaction with other plant-associated bacteria. Can. J. Microbiol. 43:254-259.
30. Quadt-Hallmann, A., N. Benhamou, and J. W. Kloepper. 1997. Bacterial endophytes in cotton: mechanisms of entering the plant. Can. J. Microbiol. 43:577-582.
31. Raupach, G. S., and J. W. Kloepper. 1998. Mixtures of plant growth-promoting rhizobacteria enhance biological control of multiple cucumber pathogens. Phytopathology 88:1158-1164.
32. Rossetti, V., M. Garnier, J. M. Bove, M. J. Beretta, A. R. R. Teixeira, J. A. Quaggio, and J. D. DeNegri. 1990. Présence de bactéries dans le xylème d'orangers atteints de chlorose variégée une nouvelle maladie des agrumes au Brésil. C. R. Acad. Sci. Paris Ser. III 310:345-349.
33. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
34. SAS Institute. 1987. SAS/STAT guide for personal computers, version 6. SAS Institute, Cary, N.C.
35. Sharma, V. K., and J. Nowak. 1998. Enhancement of verticillium wilt resistance in tomato transplants by in vitro co-culture of seedlings with a plant growth promoting rhizobacterium (Pseudomonas sp. strain PsJN). Can. J. Microbiol. 44:528-536.
36. Simpson, A. J. G., F. C. Reinach, P. Arruda, F. A. Abreu, M. Acencio, R. Alvarenga, L. M. C. Alves, J. E. Araya, G. S. Baia, C. S. Baptista, et al. 2000. The genome sequence of the plant pathogen Xylella fastidiosa. Nature 406:151-159.
37. Steel, R. G. D., and J. H. Torrie. 1980. Principles and procedures of statistics: a biometrical approach. McGraw-Hill, Toronto, Ontario, Canada.
38. Sturz, A. V., B. R. Christie, and B. G. Matheson. 1998. Association of bacterial endophyte populations from red clover and potato crops with potential for beneficial allelopathy. Can J. Microbiol. 44:162-167.
39. Sturz, A. V., and B. G Matheson. 1996. Populations of endophytic bacteria which influence host-resistance to Erwinia-induced bacterial soft rot in potato tubers. Plant Soil 184:265-271.
40. Wells, J. M., B. C. Raju, H. Hung, W. G. Weisburg, L. Mandelco-Paul, and D. J. Brenner. 1987. Xylella fastidiosa gen. nov., sp. nov.: gram-negative, xylem-limited, fastidious plant bacteria related to Xanthomonas spp. Int. J. Syst. Bacteriol. 37:136-143.