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Volumn 9, Issue 10, 2013, Pages 1467-1474

Structural characterization of the Saccharomyces cerevisiae autophagy regulatory complex Atg17-Atg31-Atg29

Author keywords

Atg17; Atg29; Atg31; Autophagy; Single particle electron microscopy

Indexed keywords

DIMER; PROTEIN ATG17; PROTEIN ATG29; PROTEIN ATG31; REGULATOR PROTEIN; UNCLASSIFIED DRUG; ATG17 PROTEIN, S CEREVISIAE; ATG29 PROTEIN, S CEREVISIAE; ATG31 PROTEIN, S CEREVISIAE; CARRIER PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN; TERNARY COMPLEX FACTOR;

EID: 84885622585     PISSN: 15548627     EISSN: 15548635     Source Type: Journal    
DOI: 10.4161/auto.25687     Document Type: Article
Times cited : (32)

References (28)
  • 1
    • 67649467294 scopus 로고    scopus 로고
    • Dynamics and diversity in autophagy mechanisms: Lessons from yeast
    • PMID:19491929
    • Nakatogawa H, Suzuki K, Kamada Y, Ohsumi Y. Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat Rev Mol Cell Biol 2009; 10:458-67; PMID:19491929; http://dx.doi.org/10.1038/nrm2708
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 458-467
    • Nakatogawa, H.1    Suzuki, K.2    Kamada, Y.3    Ohsumi, Y.4
  • 2
    • 84865302358 scopus 로고    scopus 로고
    • Mechanisms and regulation of autophagosome formation
    • PMID:22664348
    • Kraft C, Martens S. Mechanisms and regulation of autophagosome formation. Curr Opin Cell Biol 2012; 24:496-501; PMID:22664348; http://dx.doi.org/10.1016/ j.ceb.2012.05.001
    • (2012) Curr Opin Cell Biol , vol.24 , pp. 496-501
    • Kraft, C.1    Martens, S.2
  • 3
    • 65249111528 scopus 로고    scopus 로고
    • Atg systems from the protein structural point of view
    • PMID:19236009
    • Noda NN, Ohsumi Y, Inagaki F. ATG systems from the protein structural point of view. Chem Rev 2009; 109:1587-98; PMID:19236009; http://dx.doi.org/10. 1021/cr800459r
    • (2009) Chem Rev , vol.109 , pp. 1587-1598
    • Noda, N.N.1    Ohsumi, Y.2    Inagaki, F.3
  • 4
    • 77950465542 scopus 로고    scopus 로고
    • Current knowledge of the pre-autophagosomal structure (pas)
    • PMID:20138172
    • Suzuki K, Ohsumi Y. Current knowledge of the pre-autophagosomal structure (PAS). FEBS Lett 2010; 584:1280-6; PMID:20138172; http://dx.doi.org/10.1016/j. febslet.2010.02.001
    • (2010) FEBS Lett , vol.584 , pp. 1280-1286
    • Suzuki, K.1    Ohsumi, Y.2
  • 5
    • 80054025654 scopus 로고    scopus 로고
    • Role of atg proteins in autophagosome formation
    • PMID:21801009
    • Mizushima N, Yoshimori T, Ohsumi Y. The role of Atg proteins in autophagosome formation. Annu Rev Cell Dev Biol 2011; 27:107-32; PMID:21801009; http://dx.doi.org/10.1146/annurev-cellbio-092910-154005
    • (2011) Annu Rev Cell Dev Biol , vol.27 , pp. 107-132
    • Mizushima, N.1    Yoshimori, T.2    Ohsumi, Y.3
  • 6
    • 33846514235 scopus 로고    scopus 로고
    • Hierarchy of atg proteins in pre-autophagosomal structure organization
    • PMID:17295840200701050x
    • Suzuki K, Kubota Y, Sekito T, Ohsumi Y. Hierarchy of Atg proteins in pre-autophagosomal structure organization. Genes Cells 2007; 12:209-18; PMID:17295840; http://dx.doi.org/10.1111/j.1365-2443.2007.01050.x
    • (2007) Genes Cells , vol.12 , pp. 209-218
    • Suzuki, K.1    Kubota, Y.2    Sekito, T.3    Ohsumi, Y.4
  • 8
    • 18244394277 scopus 로고    scopus 로고
    • Atg17 functions in cooperation with atg1 and atg13 in yeast autophagy
    • PMID:15743910
    • Kabeya Y, Kamada Y, Baba M, Takikawa H, Sasaki M, Ohsumi Y. Atg17 functions in cooperation with Atg1 and Atg13 in yeast autophagy. Mol Biol Cell 2005; 16:2544-53; PMID:15743910; http://dx.doi.org/10.1091/mbc.E04-08-0669
    • (2005) Mol Biol Cell , vol.16 , pp. 2544-2553
    • Kabeya, Y.1    Kamada, Y.2    Baba, M.3    Takikawa, H.4    Sasaki, M.5    Ohsumi, Y.6
  • 9
    • 43149125546 scopus 로고    scopus 로고
    • Organization of the pre-autophagosomal structure responsible for autophagosome formation
    • PMID:18287526
    • Kawamata T, Kamada Y, Kabeya Y, Sekito T, Ohsumi Y. Organization of the pre-autophagosomal structure responsible for autophagosome formation. Mol Biol Cell 2008; 19:2039-50; PMID:18287526; http://dx.doi.org/10.1091/mbc.E07-10-1048
    • (2008) Mol Biol Cell , vol.19 , pp. 2039-2050
    • Kawamata, T.1    Kamada, Y.2    Kabeya, Y.3    Sekito, T.4    Ohsumi, Y.5
  • 10
    • 70349739560 scopus 로고    scopus 로고
    • Characterization of the atg17-atg29-atg31 complex specifically required for starvationinduced autophagy in saccharomyces cerevisiae
    • PMID:19755117
    • Kabeya Y, Noda NN, Fujioka Y, Suzuki K, Inagaki F, Ohsumi Y. Characterization of the Atg17-Atg29-Atg31 complex specifically required for starvationinduced autophagy in Saccharomyces cerevisiae. Biochem Biophys Res Commun 2009; 389:612-5; PMID:19755117; http://dx.doi.org/10.1016/j.bbrc.2009.09. 034
    • (2009) Biochem Biophys Res Commun , vol.389 , pp. 612-615
    • Kabeya, Y.1    Noda, N.N.2    Fujioka, Y.3    Suzuki, K.4    Inagaki, F.5    Ohsumi, Y.6
  • 12
    • 0034683568 scopus 로고    scopus 로고
    • Tor-mediated induction of autophagy via an apg1 protein kinase complex
    • PMID:10995454
    • Kamada Y, Funakoshi T, Shintani T, Nagano K, Ohsumi M, Ohsumi Y. Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 2000; 150:1507-13; PMID:10995454; http://dx.doi.org/10.1083/jcb.150.6.1507
    • (2000) J Cell Biol , vol.150 , pp. 1507-1513
    • Kamada, Y.1    Funakoshi, T.2    Shintani, T.3    Nagano, K.4    Ohsumi, M.5    Ohsumi, Y.6
  • 13
    • 84871581862 scopus 로고    scopus 로고
    • Architecture of the atg17 complex as a scaffold for autophagosome biogenesis
    • PMID:23219485
    • Ragusa MJ, Stanley RE, Hurley JH. Architecture of the Atg17 complex as a scaffold for autophagosome biogenesis. Cell 2012; 151:1501-12; PMID:23219485; http://dx.doi.org/10.1016/j.cell.2012.11.028
    • (2012) Cell , vol.151 , pp. 1501-1512
    • Ragusa, M.J.1    Stanley, R.E.2    Hurley, J.H.3
  • 14
    • 0032828715 scopus 로고    scopus 로고
    • A generic protein purification method for protein complex characterization and proteome exploration
    • PMID:10504710
    • Rigaut G, Shevchenko A, Rutz B, Wilm M, Mann M, Seraphin B. A generic protein purification method for protein complex characterization and proteome exploration. Nat Biotechnol 1999; 17:1030-2; PMID:10504710; http://dx.doi.org/ 10.1038/13732
    • (1999) Nat Biotechnol , vol.17 , pp. 1030-1032
    • Rigaut, G.1    Shevchenko, A.2    Rutz, B.3    Wilm, M.4    Mann, M.5    Seraphin, B.6
  • 15
    • 0034841844 scopus 로고    scopus 로고
    • The tandem affinity purification (tap) method: A general procedure of protein complex purification
    • PMID:114035711183
    • Puig O, Caspary F, Rigaut G, Rutz B, Bouveret E, Bragado-Nilsson E, Wilm M, Seraphin B. The tandem affinity purification (TAP) method: a general procedure of protein complex purification. Methods 2001; 24:218-29; PMID:11403571; http://dx.doi.org/10.1006/meth.2001.1183
    • (2001) Methods , vol.24 , pp. 218-229
    • Puig, O.1    Caspary, F.2    Rigaut, G.3    Rutz, B.4    Bouveret, E.5    Bragado-Nilsson, E.6    Wilm, M.7    Seraphin, B.8
  • 17
    • 79955469655 scopus 로고    scopus 로고
    • Molecular structure and flexibility of the yeast coatomer as revealed by electron microscopy
    • PMID:21435344
    • Yip CK, Walz T. Molecular structure and flexibility of the yeast coatomer as revealed by electron microscopy. J Mol Biol 2011; 408:825-31; PMID:21435344; http://dx.doi.org/10.1016/j.jmb.2011.03.029
    • (2011) J Mol Biol , vol.408 , pp. 825-831
    • Yip, C.K.1    Walz, T.2
  • 18
    • 2342662152 scopus 로고    scopus 로고
    • And image classification -Powerful tools in modern electron microscopy
    • PMID:15103397
    • Ohi M, Li Y, Cheng Y, Walz T. Negative Staining and Image Classification -Powerful Tools in Modern Electron Microscopy. Biol Proced Online 2004; 6:23-34; PMID:15103397; http://dx.doi.org/10.1251/bpo70
    • (2004) Biol Proced Online , vol.6 , pp. 23-34
    • Ohi, M.1    Li, Y.2    Cheng, Y.3    Walz, T.4    Staining, N.5
  • 19
    • 84985231782 scopus 로고
    • Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50s ribosomal subunit of escherichia coli
    • PMID:33022671987tb01333x
    • Radermacher M, Wagenknecht T, Verschoor A, Frank J. Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli. J Microsc 1987; 146:113-36; PMID:3302267; http://dx.doi.org/10.1111/j.1365-2818.1987.tb01333.x
    • (1987) J Microsc , vol.146 , pp. 113-136
    • Radermacher, M.1    Wagenknecht, T.2    Verschoor, A.3    Frank, J.4
  • 20
    • 0029975088 scopus 로고    scopus 로고
    • Spider and web: Processing and visualization of images in 3d electron microscopy and related fields
    • PMID:8742743
    • Frank J, Radermacher M, Penczek P, Zhu J, Li Y, Ladjadj M, Leith A. SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields. J Struct Biol 1996; 116:190-9; PMID:8742743; http://dx.doi.org/10.1006/jsbi.1996.0030
    • (1996) J Struct Biol , vol.116 , pp. 190-199
    • Frank, J.1    Radermacher, M.2    Penczek, P.3    Zhu, J.4    Li, Y.5    Ladjadj, M.6    Leith, A.7
  • 21
    • 78549285917 scopus 로고    scopus 로고
    • Molecular organization of the cog vesicle tethering complex
    • PMID:20972446
    • Lees JA, Yip CK, Walz T, Hughson FM. Molecular organization of the COG vesicle tethering complex. Nat Struct Mol Biol 2010; 17:1292-7; PMID:20972446; http://dx.doi.org/10.1038/nsmb.1917
    • (2010) Nat Struct Mol Biol , vol.17 , pp. 1292-1297
    • Lees, J.A.1    Yip, C.K.2    Walz, T.3    Hughson, F.M.4
  • 22
    • 84881091197 scopus 로고    scopus 로고
    • Atg29 phosphorylation regulates coordination of the atg17-atg31-atg29 complex with the atg11 scaffold during autophagy initiation
    • PMID:23858448
    • Mao K, Chew LH, Inoue-Aono Y, Cheong H, Nair U, Popelka H, Yip CK, Klionsky DJ. Atg29 phosphorylation regulates coordination of the Atg17-Atg31-Atg29 complex with the Atg11 scaffold during autophagy initiation. Proc Natl Acad Sci U S A 2013; 110:E2875-84; PMID:23858448; http://dx.doi.org/ 10.1073/pnas.1300064110
    • (2013) Proc Natl Acad Sci U S A , vol.110
    • Mao, K.1    Chew, L.H.2    Inoue-Aono, Y.3    Cheong, H.4    Nair, U.5    Popelka, H.6    Yip, C.K.7    Klionsky, D.J.8
  • 23
    • 58149473435 scopus 로고    scopus 로고
    • Role of ulk-fip200 complex in mammalian autophagy: Fip200, a counterpart of yeast Atg17?
    • PMID:18981720
    • Hara T, Mizushima N. Role of ULK-FIP200 complex in mammalian autophagy: FIP200, a counterpart of yeast Atg17? Autophagy 2009; 5:85-7; PMID:18981720; http://dx.doi.org/10.4161/auto.5.1.7180
    • (2009) Autophagy , vol.5 , pp. 85-87
    • Hara, T.1    Mizushima, N.2
  • 25
    • 33947378818 scopus 로고    scopus 로고
    • Cis1/atg31 is required for autophagosome formation in saccharomyces cerevisiae
    • PMID:17362880
    • Kabeya Y, Kawamata T, Suzuki K, Ohsumi Y. Cis1/Atg31 is required for autophagosome formation in Saccharomyces cerevisiae. Biochem Biophys Res Commun 2007; 356:405-10; PMID:17362880; http://dx.doi.org/10.1016/j.bbrc.2007.02.150
    • (2007) Biochem Biophys Res Commun , vol.356 , pp. 405-410
    • Kabeya, Y.1    Kawamata, T.2    Suzuki, K.3    Ohsumi, Y.4
  • 26
    • 80052194357 scopus 로고    scopus 로고
    • Let's go bananas: Revisiting the endocytic bar code
    • PMID:21878992
    • Qualmann B, Koch D, Kessels MM. Let's go bananas: revisiting the endocytic BAR code. EMBO J 2011; 30:3501-15; PMID:21878992; http://dx.doi.org/ 10.1038/emboj.2011.266
    • (2011) EMBO J , vol.30 , pp. 3501-3515
    • Qualmann, B.1    Koch, D.2    Kessels, M.M.3
  • 27
    • 2942615325 scopus 로고    scopus 로고
    • Structure of a complex between a voltage-gated calcium channel beta-subunit and an alpha-subunit domain
    • PMID:15141227
    • Van Petegem F, Clark KA, Chatelain FC, Minor DL Jr. Structure of a complex between a voltage-gated calcium channel beta-subunit and an alpha-subunit domain. Nature 2004; 429:671-5; PMID:15141227; http://dx.doi.org/10.1038/nature02588
    • (2004) Nature , vol.429 , pp. 671-675
    • Van Petegem, F.1    Clark, K.A.2    Chatelain, F.C.3    Minor Jr., D.L.4
  • 28
    • 0033377664 scopus 로고    scopus 로고
    • Eman: Semiautomated software for high-resolution singleparticle reconstructions
    • PMID:10600563
    • Ludtke SJ, Baldwin PR, Chiu W. EMAN: semiautomated software for high-resolution singleparticle reconstructions. J Struct Biol 1999; 128:82-97; PMID:10600563; http://dx.doi.org/10.1006/jsbi.1999.4174
    • (1999) J Struct Biol , vol.128 , pp. 82-97
    • Ludtke, S.J.1    Baldwin, P.R.2    Chiu, W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.