메뉴 건너뛰기




Volumn , Issue , 2010, Pages 1-16

General Stress Response of a Model Bacterium

Author keywords

Escherichia coli; General stress response; Model bacterium; Regulatory network; RNA polymerase; RpoS

Indexed keywords


EID: 84885556004     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9783527628964.ch1     Document Type: Chapter
Times cited : (1)

References (88)
  • 1
    • 0035931866 scopus 로고    scopus 로고
    • Life in extreme environments
    • Rothschild, L.J. and Mancinelli, R.L. (2001) Life in extreme environments. Nature, 409, 1092-1101.
    • (2001) Nature , vol.409 , pp. 1092-1101
    • Rothschild, L.J.1    Mancinelli, R.L.2
  • 2
    • 9344261804 scopus 로고    scopus 로고
    • Stress and how bacteria cope with death and survival
    • Aertsen, A. and Michiels, C.W. (2004) Stress and how bacteria cope with death and survival. Crit. Rev. Microbiol., 30, 263-273.
    • (2004) Crit. Rev. Microbiol. , vol.30 , pp. 263-273
    • Aertsen, A.1    Michiels, C.W.2
  • 3
    • 19944405112 scopus 로고    scopus 로고
    • Diversify or die: generation of diversity in response to stress
    • Aertsen, A. and Michiels, C.W. (2005) Diversify or die: generation of diversity in response to stress. Crit. Rev. Microbiol., 31, 69-78.
    • (2005) Crit. Rev. Microbiol. , vol.31 , pp. 69-78
    • Aertsen, A.1    Michiels, C.W.2
  • 4
    • 0032715175 scopus 로고    scopus 로고
    • Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
    • Kuzminov, A. (1999) Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda. Microbiol. Mol. Biol. Rev., 63, 751-813.
    • (1999) Microbiol. Mol. Biol. Rev. , vol.63 , pp. 751-813
    • Kuzminov, A.1
  • 5
    • 0036714331 scopus 로고    scopus 로고
    • Signal transduction and regulation mechanisms involved in control of the sS (RpoS) subunit of RNA polymerase
    • Hengge-Aronis, R. (2002) Signal transduction and regulation mechanisms involved in control of the sS (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev., 66, 373-395.
    • (2002) Microbiol. Mol. Biol. Rev. , vol.66 , pp. 373-395
    • Hengge-aronis, R.1
  • 7
    • 0038180232 scopus 로고    scopus 로고
    • The bacteria strike back
    • April, 8-11.
    • Booth, I.R. (1998) The bacteria strike back. Biochemist, April, 8-11.
    • (1998) Biochemist
    • Booth, I.R.1
  • 8
    • 0029151682 scopus 로고
    • The stationary phase sigma factor sS (RpoS) is required for a sustained acid tolerance response in virulent Salmonella typhimurium
    • Lee, I.S., Lin, J., Hall, H.K., Bearson, B., and Foster, J.W. (1995) The stationary phase sigma factor sS (RpoS) is required for a sustained acid tolerance response in virulent Salmonella typhimurium. Mol. Microbiol., 17, 155-167.
    • (1995) Mol. Microbiol. , vol.17 , pp. 155-167
    • Lee, I.S.1    Lin, J.2    Hall, H.K.3    Bearson, B.4    Foster, J.W.5
  • 9
    • 0029608869 scopus 로고
    • Physiology of the osmotic stress response in microorganisms
    • Gutierrez, C., Abee, T., and Booth, I.R. (1995) Physiology of the osmotic stress response in microorganisms. Int. J. Food Microbiol., 28, 233-244.
    • (1995) Int. J. Food Microbiol. , vol.28 , pp. 233-244
    • Gutierrez, C.1    Abee, T.2    Booth, I.R.3
  • 10
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in Escherichia coli: sS-dependent genes, promoters, and sigma factor selectivity
    • Weber, H., Polen, T., Heuveling, J., Wendisch, V.F., and Hengge, R. (2005) Genome-wide analysis of the general stress response network in Escherichia coli: sS-dependent genes, promoters, and sigma factor selectivity. J. Bacteriol., 187, 1591-1603.
    • (2005) J. Bacteriol. , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 11
    • 33745210122 scopus 로고    scopus 로고
    • Rahman, M., Hasan, M.R., Oba, T., and Shimizu, K. (2006) Effect of rpoS gene knockout on the metabolism of Escherichia coli during exponential growth phase and early stationary phase based on gene expressions, enzyme activities and intracellular metabolite concentrations. Biotechnol. Bioeng., 94, 585-595.
  • 12
    • 39849089745 scopus 로고    scopus 로고
    • New insights into the role of sigma factor RpoS as revealed in Escherichia coli strains lacking the phosphoenolpyruvate : carbohydrate phosphotransferase system
    • Flores, N., Escalante, A., de Anda, R., Báez-Viveros, J.L., Merino, E., Franco, B., Georgellis, D., Gosset, G., and Bolívar, F. (2008) New insights into the role of sigma factor RpoS as revealed in Escherichia coli strains lacking the phosphoenolpyruvate : carbohydrate phosphotransferase system. J. Mol. Microbiol. Biotechnol., 14, 176-192.
    • (2008) J. Mol. Microbiol. Biotechnol. , vol.14 , pp. 176-192
    • Flores, N.1    Escalante, A.2    De Anda, R.3    Báez-viveros, J.L.4    Merino, E.5    Franco, B.6    Georgellis, D.7    Gosset, G.8    Bolívar, F.9
  • 13
    • 0036198628 scopus 로고    scopus 로고
    • Recent insights into the general stress response regulatory network in Escherichia coli
    • Hengge-Aronis, R. (2002) Recent insights into the general stress response regulatory network in Escherichia coli. J. Mol. Microbiol. Biotechnol., 4, 341-346.
    • (2002) J. Mol. Microbiol. Biotechnol. , vol.4 , pp. 341-346
    • Hengge-aronis, R.1
  • 15
    • 39249084651 scopus 로고    scopus 로고
    • RpoS regulation of gene expression during exponential growth of Escherichia coli K12
    • Dong, T., Kirchhof, M.G., and Schellhorn, H.E. (2008) RpoS regulation of gene expression during exponential growth of Escherichia coli K12. Mol. Genet. Genomics, 279, 267-277.
    • (2008) Mol. Genet. Genomics , vol.279 , pp. 267-277
    • Dong, T.1    Kirchhof, M.G.2    Schellhorn, H.E.3
  • 16
    • 0029843811 scopus 로고    scopus 로고
    • Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coli
    • Hengge-Aronis, R. (1996) Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coli. Mol. Microbiol., 21, 887-893.
    • (1996) Mol. Microbiol. , vol.21 , pp. 887-893
    • Hengge-aronis, R.1
  • 18
    • 0031719418 scopus 로고    scopus 로고
    • Uptake and synthesis of compatible solutes as microbial stress responses to highosmolality environments
    • Kempf, B. and Bremer, E. (1998) Uptake and synthesis of compatible solutes as microbial stress responses to highosmolality environments. Arch. Microbiol., 170, 319-330.
    • (1998) Arch. Microbiol. , vol.170 , pp. 319-330
    • Kempf, B.1    Bremer, E.2
  • 19
    • 0027166941 scopus 로고
    • Trehalose metabolism in Escherichia coli: stress protection and stress regulation of gene expression
    • Strøm, A.R. and Kaasen, I. (1993) Trehalose metabolism in Escherichia coli: stress protection and stress regulation of gene expression. Mol. Microbiol., 8, 205-210.
    • (1993) Mol. Microbiol. , vol.8 , pp. 205-210
    • Strøm, A.R.1    Kaasen, I.2
  • 20
    • 0026541540 scopus 로고
    • Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR)
    • Kaasen, I., Falkenberg, P., Styrvold, O.B., and Strøm, A.R. (1992) Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR). J. Bacteriol., 174, 889-898.
    • (1992) J. Bacteriol. , vol.174 , pp. 889-898
    • Kaasen, I.1    Falkenberg, P.2    Styrvold, O.B.3    Strøm, A.R.4
  • 21
    • 0026020230 scopus 로고
    • Identification of a central regulator of stationary phase gene expression in Escherichia coli
    • Lange, R. and Hengge-Aronis, R.(1991) Identification of a central regulator of stationary phase gene expression in Escherichia coli. Mol. Microbiol., 5, 49-59.
    • (1991) Mol. Microbiol. , vol.5 , pp. 49-59
    • Lange, R.1    Hengge-aronis, R.2
  • 22
    • 0025785253 scopus 로고
    • The putative sigma factor KatF has a central role in development of starvation-mediated general resistance in Escherichia coli
    • McCann, M.P., Kidwell, J.P., and Matin, A. (1991) The putative sigma factor KatF has a central role in development of starvation-mediated general resistance in Escherichia coli. J. Bacteriol., 173, 4188-4194.
    • (1991) J. Bacteriol. , vol.173 , pp. 4188-4194
    • McCann, M.P.1    Kidwell, J.P.2    Matin, A.3
  • 23
    • 0024677030 scopus 로고
    • Analysis and DNA sequence of the osmoregulated treA gene encoding the periplasmic trehalase of Escherichia coli K12
    • Gutierrez, C., Ardourel, M., Bremer, E., Middendorf, A., Boos, W., and Ehmann, U. (1989) Analysis and DNA sequence of the osmoregulated treA gene encoding the periplasmic trehalase of Escherichia coli K12. Mol. Gen. Genomics, 217, 347-354.
    • (1989) Mol. Gen. Genomics , vol.217 , pp. 347-354
    • Gutierrez, C.1    Ardourel, M.2    Bremer, E.3    Middendorf, A.4    Boos, W.5    Ehmann, U.6
  • 24
    • 0029080726 scopus 로고
    • Fis activates the RpoS-dependent stationaryphase expression of proP in Escherichia coli
    • Xu, J. and Johnson, R.C. (1995) Fis activates the RpoS-dependent stationaryphase expression of proP in Escherichia coli. J. Bacteriol., 177, 5222-5231.
    • (1995) J. Bacteriol. , vol.177 , pp. 5222-5231
    • Xu, J.1    Johnson, R.C.2
  • 25
    • 0028324804 scopus 로고
    • Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH
    • Small, P., Blankenhorn, D., Welty, D., Zinser, E., and Slonczewski, J.L. (1994) Acid and base resistance in Escherichia coli and Shigella flexneri: role of rpoS and growth pH. J. Bacteriol., 176, 1729-1737.
    • (1994) J. Bacteriol. , vol.176 , pp. 1729-1737
    • Small, P.1    Blankenhorn, D.2    Welty, D.3    Zinser, E.4    Slonczewski, J.L.5
  • 26
    • 0038349356 scopus 로고    scopus 로고
    • Regulatory network of acid resistance genes in Escherichia coli
    • Masuda, N. and Church, G.M. (2003) Regulatory network of acid resistance genes in Escherichia coli. Mol. Microbiol., 48, 699-712.
    • (2003) Mol. Microbiol. , vol.48 , pp. 699-712
    • Masuda, N.1    Church, G.M.2
  • 27
    • 1642514566 scopus 로고    scopus 로고
    • GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli
    • Hommais, F., Krin, E., Coppée, J.Y., Lacroix, C., Yeramian, E., Danchin, A., and Bertin, P. (2004) GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli. Microbiology, 150, 61-72.
    • (2004) Microbiology , vol.150 , pp. 61-72
    • Hommais, F.1    Krin, E.2    Coppée, J.Y.3    Lacroix, C.4    Yeramian, E.5    Danchin, A.6    Bertin, P.7
  • 28
    • 0141566454 scopus 로고    scopus 로고
    • GadE (YhiE) activates glutamate decarboxylase-dependent acid resistance in Escherichia coli K-12
    • Ma, Z., Gong, S., Richard, H., Tucker, D.L., Conway, T., and Foster, J.W. (2003) GadE (YhiE) activates glutamate decarboxylase-dependent acid resistance in Escherichia coli K-12. Mol. Microbiol., 49, 1309-1320.
    • (2003) Mol. Microbiol. , vol.49 , pp. 1309-1320
    • Ma, Z.1    Gong, S.2    Richard, H.3    Tucker, D.L.4    Conway, T.5    Foster, J.W.6
  • 31
    • 54249135920 scopus 로고    scopus 로고
    • GadX/GadW-dependent regulation of the Escherichia coli acid fitness island: transcriptional control at the gadY-gadW divergent promoters and identification of four novel 42-bp GadX/GadW-specific binding sites
    • Tramonti, A., De Canio, M., and De Biase, D. (2008) GadX/GadW-dependent regulation of the Escherichia coli acid fitness island: transcriptional control at the gadY-gadW divergent promoters and identification of four novel 42-bp GadX/GadW-specific binding sites. Mol. Microbiol., 70, 965-982.
    • (2008) Mol. Microbiol. , vol.70 , pp. 965-982
    • Tramonti, A.1    Canio, D.M.2    Biase, D.D.3
  • 32
    • 0027509821 scopus 로고
    • Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation
    • Hengge-Aronis, R. (1993) Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation. Cell, 72, 165-168.
    • (1993) Cell , vol.72 , pp. 165-168
    • Hengge-aronis, R.1
  • 33
    • 34548720319 scopus 로고    scopus 로고
    • The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli
    • Klauck, E., Typas, A., and Hengge, R. (2007) The sigmaS subunit of RNA polymerase as a signal integrator and network master regulator in the general stress response in Escherichia coli. Sci. Prog., 90, 103-127.
    • (2007) Sci. Prog. , vol.90 , pp. 103-127
    • Klauck, E.1    Typas, A.2    Hengge, R.3
  • 34
    • 0028787734 scopus 로고
    • Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38
    • Jishage, M. and Ishihama, A. (1995) Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of sigma 70 and sigma 38. J. Bacteriol., 177, 6832-6835.
    • (1995) J. Bacteriol. , vol.177 , pp. 6832-6835
    • Jishage, M.1    Ishihama, A.2
  • 35
    • 0028176450 scopus 로고
    • The cellular concentration of the sS subunit of RNA-polymerase in Escherichia coli is controlled at the levels of transcription, translation and protein stability
    • Lange, R. and Hengge-Aronis, R. (1994) The cellular concentration of the sS subunit of RNA-polymerase in Escherichia coli is controlled at the levels of transcription, translation and protein stability. Genes Dev., 8, 1600-1612.
    • (1994) Genes Dev. , vol.8 , pp. 1600-1612
    • Lange, R.1    Hengge-aronis, R.2
  • 36
    • 0037023221 scopus 로고    scopus 로고
    • The importance of RpoS in the survival of bacteria through food processing
    • Dodd, C.E.R. and Aldsworth, T.G. (2002) The importance of RpoS in the survival of bacteria through food processing. Int. J. Food Microbiol., 74, 189-194.
    • (2002) Int. J. Food Microbiol. , vol.74 , pp. 189-194
    • Dodd, C.E.R.1    Aldsworth, T.G.2
  • 37
    • 0029961688 scopus 로고    scopus 로고
    • Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimurium
    • Bearson, S.M., Benjamin, W.H. Jr., Swords, W.E., and Foster, J.W. (1996) Acid shock induction of RpoS is mediated by the mouse virulence gene mviA of Salmonella typhimurium. J. Bacteriol., 178, 2572-2579.
    • (1996) J. Bacteriol. , vol.178 , pp. 2572-2579
    • Bearson, S.M.1    Benjamin Jr., W.H.2    Swords, W.E.3    Foster, J.W.4
  • 38
    • 0035281566 scopus 로고    scopus 로고
    • The RssB response regulator directly targets sigmaS for degradation by ClpXP
    • Zhou, Y., Gottesman, S., Hoskins, J.R., Maurizi, M.R., and Wickner, S. (2001) The RssB response regulator directly targets sigmaS for degradation by ClpXP. Genes Dev., 15, 627-637.
    • (2001) Genes Dev. , vol.15 , pp. 627-637
    • Zhou, Y.1    Gottesman, S.2    Hoskins, J.R.3    Maurizi, M.R.4    Wickner, S.5
  • 39
    • 0037709130 scopus 로고    scopus 로고
    • Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different?
    • Venturi, V. (2003) Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different? Mol. Microbiol., 49, 1-9.
    • (2003) Mol. Microbiol. , vol.49 , pp. 1-9
    • Venturi, V.1
  • 40
    • 0028106775 scopus 로고
    • The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation
    • Lange, R. and Hengge-Aronis, R. (1994) The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation. Mol. Microbiol., 13, 733-743.
    • (1994) Mol. Microbiol. , vol.13 , pp. 733-743
    • Lange, R.1    Hengge-aronis, R.2
  • 41
    • 0035150147 scopus 로고    scopus 로고
    • Negative control of rpoS expression by phosphoenolpyruvate : carbohydrate phosphotransferase system in Escherichia coli
    • Ueguchi, C., Misonou, N., and Mizuno, T. (2001) Negative control of rpoS expression by phosphoenolpyruvate : carbohydrate phosphotransferase system in Escherichia coli. J. Bacteriol., 183, 520-527.
    • (2001) J. Bacteriol. , vol.183 , pp. 520-527
    • Ueguchi, C.1    Misonou, N.2    Mizuno, T.3
  • 43
    • 44749093027 scopus 로고    scopus 로고
    • The long and short of it-polyphosphate, PPK and bacterial survival
    • Brown, M.R. and Kornberg, A. (2008) The long and short of it-polyphosphate, PPK and bacterial survival. Trends Biochem. Sci., 33, 284-290.
    • (2008) Trends Biochem. Sci. , vol.33 , pp. 284-290
    • Brown, M.R.1    Kornberg, A.2
  • 44
    • 0025315968 scopus 로고
    • Polyphosphate kinase from Escherichia coli. Purification and demonstration of a phosphoenzyme intermediate
    • Ahn, K. and Kornberg, A. (1990) Polyphosphate kinase from Escherichia coli. Purification and demonstration of a phosphoenzyme intermediate. J. Biol. Chem., 265, 11734-11739.
    • (1990) J. Biol. Chem. , vol.265 , pp. 11734-11739
    • Ahn, K.1    Kornberg, A.2
  • 45
    • 0027439691 scopus 로고    scopus 로고
    • An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon
    • Akiyama, M., Crooke, E., and Kornberg, A. (2003) An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon. J. Biol. Chem., 268, 633-639.
    • (2003) J. Biol. Chem. , vol.268 , pp. 633-639
    • Akiyama, M.1    Crooke, E.2    Kornberg, A.3
  • 46
    • 0030771435 scopus 로고    scopus 로고
    • Guanosine tetraand pentaphosphate promote accumulation of inorganic polyphosphate in Escherichia coli
    • Kuroda, A., Murphy, H., Cashel, M., and Kornberg, A. (1997) Guanosine tetraand pentaphosphate promote accumulation of inorganic polyphosphate in Escherichia coli. J. Biol. Chem., 272, 21240-21243.
    • (1997) J. Biol. Chem. , vol.272 , pp. 21240-21243
    • Kuroda, A.1    Murphy, H.2    Cashel, M.3    Kornberg, A.4
  • 47
  • 49
    • 0027139270 scopus 로고
    • Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp
    • Gentry, D.R., Hernandez, V.J., Nguyen, L.H., Jensen, D.B., and Cashel, M. (1993) Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp. J. Bacteriol., 175, 7982-7989.
    • (1993) J. Bacteriol. , vol.175 , pp. 7982-7989
    • Gentry, D.R.1    Hernandez, V.J.2    Nguyen, L.H.3    Jensen, D.B.4    Cashel, M.5
  • 50
    • 0029082430 scopus 로고
    • Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli
    • Lange, R., Fischer, D., and Hengge-Aronis, R. (1995) Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigma S subunit of RNA polymerase in Escherichia coli. J. Bacteriol., 177, 4676-4680.
    • (1995) J. Bacteriol. , vol.177 , pp. 4676-4680
    • Lange, R.1    Fischer, D.2    Hengge-aronis, R.3
  • 51
    • 0033942883 scopus 로고    scopus 로고
    • Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two-component regulator
    • Mukhopadhyay, S., Audia, J.P., Roy, R.N., and Schellhorn, H.E. (2000) Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two-component regulator. Mol. Microbiol., 37, 371-381.
    • (2000) Mol. Microbiol. , vol.37 , pp. 371-381
    • Mukhopadhyay, S.1    Audia, J.P.2    Roy, R.N.3    Schellhorn, H.E.4
  • 52
    • 0031015478 scopus 로고    scopus 로고
    • Heat shock regulation of sS turnover: a role for DnaK and relationship between stress responses mediated by sS and s32 in Escherichia coli
    • Muffler, A., Barth, M., Marschall, C., and Hengge-Aronis, R. (1997) Heat shock regulation of sS turnover: a role for DnaK and relationship between stress responses mediated by sS and s32 in Escherichia coli. J. Bacteriol., 179, 445-452.
    • (1997) J. Bacteriol. , vol.179 , pp. 445-452
    • Muffler, A.1    Barth, M.2    Marschall, C.3    Hengge-aronis, R.4
  • 53
    • 34247109118 scopus 로고    scopus 로고
    • Hfq structure, function and ligand binding
    • Brennan, R.G. and Link, T.M. (2007) Hfq structure, function and ligand binding. Curr. Opin. Microbiol., 10, 125-133.
    • (2007) Curr. Opin. Microbiol. , vol.10 , pp. 125-133
    • Brennan, R.G.1    Link, T.M.2
  • 54
    • 0029897937 scopus 로고    scopus 로고
    • The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli
    • Muffler, A., Fischer, D., and Hengge-Aronis, R. (1996) The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli. Genes Dev., 10, 1143-1151.
    • (1996) Genes Dev. , vol.10 , pp. 1143-1151
    • Muffler, A.1    Fischer, D.2    Hengge-aronis, R.3
  • 56
    • 0032514739 scopus 로고    scopus 로고
    • DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription
    • Majdalani, N., Cunning, C., Sledjeski, D., Elliot, T., and Gottesman, S. (1998) DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. Proc. Natl. Acad. Sci. USA, 95, 12462-12467.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 12462-12467
    • Majdalani, N.1    Cunning, C.2    Sledjeski, D.3    Elliot, T.4    Gottesman, S.5
  • 57
    • 0034730125 scopus 로고    scopus 로고
    • A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures
    • Lease, R.A. and Belfort, M. (2000) A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures. Proc. Natl. Acad. Sci. USA, 97, 9919-9924.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 9919-9924
    • Lease, R.A.1    Belfort, M.2
  • 58
    • 0033639199 scopus 로고    scopus 로고
    • Riboregulation by DsrA RNA: transactions for global economy
    • Lease, R.A. and Belfort, M. (2000) Riboregulation by DsrA RNA: transactions for global economy. Mol. Microbiol., 38, 667-672.
    • (2000) Mol. Microbiol. , vol.38 , pp. 667-672
    • Lease, R.A.1    Belfort, M.2
  • 59
    • 9244253711 scopus 로고    scopus 로고
    • Cycling of the SM-like protein Hfq on the DsrA small regulatory RNA
    • Lease, R.A. and Woodson, S.A. (2004) Cycling of the SM-like protein Hfq on the DsrA small regulatory RNA. J. Mol. Biol., 344, 1211-1223.
    • (2004) J. Mol. Biol. , vol.344 , pp. 1211-1223
    • Lease, R.A.1    Woodson, S.A.2
  • 60
    • 0035104707 scopus 로고    scopus 로고
    • Hfq is necessary for regulation by the untranslated RNA DsrA
    • Sledjeski, D., Whitman, C.W., and Zhang, A. (2001) Hfq is necessary for regulation by the untranslated RNA DsrA. J. Bacteriol., 183, 1997-2005.
    • (2001) J. Bacteriol. , vol.183 , pp. 1997-2005
    • Sledjeski, D.1    Whitman, C.W.2    Zhang, A.3
  • 61
    • 0038187589 scopus 로고    scopus 로고
    • Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm
    • Repoila, F., Majdalani, N., and Gottesman, S. (2003) Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm. Mol. Microbiol., 48, 855-861.
    • (2003) Mol. Microbiol. , vol.48 , pp. 855-861
    • Repoila, F.1    Majdalani, N.2    Gottesman, S.3
  • 62
    • 0242575015 scopus 로고    scopus 로고
    • Temperature sensing by the dsrA promoter
    • Repoila, F. and Gottesman, S. (2003) Temperature sensing by the dsrA promoter. J. Bacteriol., 185, 6609-6614.
    • (2003) J. Bacteriol. , vol.185 , pp. 6609-6614
    • Repoila, F.1    Gottesman, S.2
  • 63
    • 4344682527 scopus 로고    scopus 로고
    • The small RNA regulators of Escherichia coli: roles and mechanisms
    • Gottesman, S. (2004) The small RNA regulators of Escherichia coli: roles and mechanisms. Annu. Rev. Microbiol., 58, 303-328.
    • (2004) Annu. Rev. Microbiol. , vol.58 , pp. 303-328
    • Gottesman, S.1
  • 64
    • 0032531904 scopus 로고    scopus 로고
    • The oxyS regulatory RNA represses rpoS translation by binding Hfq (HF-1) protein
    • Zhang, A., Altuvia, S., Tiwari, A., Argaman, L., Hengge-Aronis, R., and Storz, G. (1998) The oxyS regulatory RNA represses rpoS translation by binding Hfq (HF-1) protein. EMBO J., 17, 6061-6068.
    • (1998) EMBO J. , vol.17 , pp. 6061-6068
    • Zhang, A.1    Altuvia, S.2    Tiwari, A.3    Argaman, L.4    Hengge-aronis, R.5    Storz, G.6
  • 65
    • 0031459386 scopus 로고    scopus 로고
    • A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator
    • Altuvia, S., Almirón, M., Huisman, G., Kolter, R., and Storz, G. (1997) A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator. Cell, 90, 43-53.
    • (1997) Cell , vol.90 , pp. 43-53
    • Altuvia, S.1    Almirón, M.2    Huisman, G.3    Kolter, R.4    Storz, G.5
  • 66
    • 0033214062 scopus 로고    scopus 로고
    • The binding motif recognized by HU on both nicked and cruciform DNA
    • Kamashev, D., Balandina, A., and Rouviére-Yaniv, J. (1999) The binding motif recognized by HU on both nicked and cruciform DNA. EMBO J., 18, 5434-5444.
    • (1999) EMBO J. , vol.18 , pp. 5434-5444
    • Kamashev, D.1    Balandina, A.2    Rouviére-yaniv, J.3
  • 67
    • 0035117825 scopus 로고    scopus 로고
    • The Escherichia coli histone-like protein HU regulates rpoS translation
    • Balandina, A., Claret, L., Hengge-Aronis, R., and Rouviére-Yaniv, J. (2001) The Escherichia coli histone-like protein HU regulates rpoS translation. Mol. Microbiol., 39, 1069-1079.
    • (2001) Mol. Microbiol. , vol.39 , pp. 1069-1079
    • Balandina, A.1    Claret, L.2    Hengge-aronis, R.3    Rouviére-yaniv, J.4
  • 69
    • 33846465923 scopus 로고    scopus 로고
    • H-NS, the genome sentinel
    • Dorman, C.J. (2007) H-NS, the genome sentinel. Nat. Rev. Microbiol., 5, 157-161.
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 157-161
    • Dorman, C.J.1
  • 70
    • 2442483884 scopus 로고    scopus 로고
    • The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivo
    • Brescia, C.C., Kaw, M.K., and Sledjeski, D.D. (2004) The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivo. J. Mol. Biol., 339, 505-514.
    • (2004) J. Mol. Biol. , vol.339 , pp. 505-514
    • Brescia, C.C.1    Kaw, M.K.2    Sledjeski, D.D.3
  • 71
    • 0028895391 scopus 로고
    • Quantitative control of the stationary phase-specific sigma factor, sS, in Escherichia coli: involvement of the nucleoid protein HNS
    • Yamashino, T., Ueguchi, C., and Mizuno, T. (1995) Quantitative control of the stationary phase-specific sigma factor, sS, in Escherichia coli: involvement of the nucleoid protein HNS. EMBO J., 14, 594-602.
    • (1995) EMBO J. , vol.14 , pp. 594-602
    • Yamashino, T.1    Ueguchi, C.2    Mizuno, T.3
  • 72
    • 0036331056 scopus 로고    scopus 로고
    • DksA affects ppGpp induction of RpoS at a translational level
    • Brown, L., Gentry, D., Elliott, T., and Cashel, M. (2002) DksA affects ppGpp induction of RpoS at a translational level. J. Bacteriol., 184, 4455-4465.
    • (2002) J. Bacteriol. , vol.184 , pp. 4455-4465
    • Brown, L.1    Gentry, D.2    Elliott, T.3    Cashel, M.4
  • 73
    • 0031884182 scopus 로고    scopus 로고
    • Regulation of proteolysis of the stationary-phase sigma factor RpoS
    • Zhou, Y. and Gottesman, S. (1998) Regulation of proteolysis of the stationary-phase sigma factor RpoS. J. Bacteriol., 180, 1154-1158.
    • (1998) J. Bacteriol. , vol.180 , pp. 1154-1158
    • Zhou, Y.1    Gottesman, S.2
  • 74
    • 0030033933 scopus 로고    scopus 로고
    • Regulation of Escherichia coli starvation sigma factor (sS) by ClpXP protease
    • Schweder, T., Lee, K., Lomovskaya, O., and Matin, A. (1996) Regulation of Escherichia coli starvation sigma factor (sS) by ClpXP protease. J. Bacteriol., 178, 470-476.
    • (1996) J. Bacteriol. , vol.178 , pp. 470-476
    • Schweder, T.1    Lee, K.2    Lomovskaya, O.3    Matin, A.4
  • 75
    • 0029983001 scopus 로고    scopus 로고
    • The response regulator SprE controls the stability of RpoS
    • Pratt, L.A. and Silhavy, T.J. (1996) The response regulator SprE controls the stability of RpoS. Proc. Natl. Acad. Sci. USA, 93, 2488-2492.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 2488-2492
    • Pratt, L.A.1    Silhavy, T.J.2
  • 76
    • 6044235523 scopus 로고    scopus 로고
    • RpoS proteolysis is regulated by a mechanism that does not require the SprE (RssB) response regulator phosphorylation site
    • Peterson, C.N., Ruiz, N., and Silhavy, T.J. (2004) RpoS proteolysis is regulated by a mechanism that does not require the SprE (RssB) response regulator phosphorylation site. J. Bacteriol., 186, 7403-7410.
    • (2004) J. Bacteriol. , vol.186 , pp. 7403-7410
    • Peterson, C.N.1    Ruiz, N.2    Silhavy, T.J.3
  • 77
    • 33645522854 scopus 로고    scopus 로고
    • Modulating RssB activity: IraP, a novel regulator of sigmaS stability in Escherichia coli
    • Bougdour, A., Wickner, S., and Gottesman, S. (2006) Modulating RssB activity: IraP, a novel regulator of sigmaS stability in Escherichia coli. Genes Dev., 20, 884-897.
    • (2006) Genes Dev. , vol.20 , pp. 884-897
    • Bougdour, A.1    Wickner, S.2    Gottesman, S.3
  • 78
    • 34547913090 scopus 로고    scopus 로고
    • ppGpp regulation of RpoS degradation via anti-adaptor protein IraP
    • Bougdour, A. and Gottesman, S. (2007) ppGpp regulation of RpoS degradation via anti-adaptor protein IraP. Proc. Natl. Acad. Sci. USA, 104, 12896-12901.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 12896-12901
    • Bougdour, A.1    Gottesman, S.2
  • 79
    • 41049111259 scopus 로고    scopus 로고
    • Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors
    • Bougdour, A., Cunning, C., Baptiste, P.J., Elliott, T., and Gottesman, S. (2008) Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors. Mol. Microbiol., 68, 298-313.
    • (2008) Mol. Microbiol. , vol.68 , pp. 298-313
    • Bougdour, A.1    Cunning, C.2    Baptiste, P.J.3    Elliott, T.4    Gottesman, S.5
  • 80
    • 34147125783 scopus 로고    scopus 로고
    • Decline in ribosomal fidelity contributes to the accumulation and stabilization of the master stress response regulator sigmaS upon carbon starvation
    • Fredriksson, A., Ballesteros, M., Peterson, C.N., Persson, O., Silhavy, T.J., and Nyström, T. (2007) Decline in ribosomal fidelity contributes to the accumulation and stabilization of the master stress response regulator sigmaS upon carbon starvation. Genes Dev., 21, 862-874.
    • (2007) Genes Dev. , vol.21 , pp. 862-874
    • Fredriksson, A.1    Ballesteros, M.2    Peterson, C.N.3    Persson, O.4    Silhavy, T.J.5    Nyström, T.6
  • 81
    • 0031844376 scopus 로고    scopus 로고
    • Negative regulation by RpoS: a case of sigma factor competition
    • Farewell, A., Kvint, K., and Nyström, T. (1998) Negative regulation by RpoS: a case of sigma factor competition. Mol. Microbiol., 29, 1039-1051.
    • (1998) Mol. Microbiol. , vol.29 , pp. 1039-1051
    • Farewell, A.1    Kvint, K.2    Nyström, T.3
  • 82
    • 8544232750 scopus 로고    scopus 로고
    • Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?
    • Nyström, T. (2004) Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition? Mol. Microbiol., 54, 855-862.
    • (2004) Mol. Microbiol. , vol.54 , pp. 855-862
    • Nyström, T.1
  • 83
    • 0029810991 scopus 로고    scopus 로고
    • Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions
    • Jishage, M., Iwata, A., Ueda, S, and Ishihama, A. (1996) Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions. J. Bacteriol., 178, 5447-5451.
    • (1996) J. Bacteriol. , vol.178 , pp. 5447-5451
    • Jishage, M.1    Iwata, A.2    Ueda, S.3    Ishihama, A.4
  • 84
    • 0034666279 scopus 로고    scopus 로고
    • Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase
    • Maeda, H., Fujita, N., and Ishihama, A. (2000) Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. Nucleic Acids Res., 28, 3497-3503.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 3497-3503
    • Maeda, H.1    Fujita, N.2    Ishihama, A.3
  • 85
    • 0035847007 scopus 로고    scopus 로고
    • Binding of the transcription effector ppGpp to Escherichia coli RNA polymerase is allosteric, modular, and occurs near the N terminus of the betau-subunit
    • Toulokhonov, I.I., Shulgina, I., and Hernandez, V.J. (2001) Binding of the transcription effector ppGpp to Escherichia coli RNA polymerase is allosteric, modular, and occurs near the N terminus of the betau-subunit. J. Biol. Chem., 276, 1220-1225.
    • (2001) J. Biol. Chem. , vol.276 , pp. 1220-1225
    • Toulokhonov, I.I.1    Shulgina, I.2    Hernandez, V.J.3
  • 87
    • 0028200484 scopus 로고
    • The dps promoter is activated by OxyR during growth and by IHF and S in stationary phase
    • Altuvia, S., Almirón, M., Huisman, G., Kolter, R., and Storz, G. (1994) The dps promoter is activated by OxyR during growth and by IHF and S in stationary phase. Mol. Microbiol., 13, 265-272.
    • (1994) Mol. Microbiol. , vol.13 , pp. 265-272
    • Altuvia, S.1    Almirón, M.2    Huisman, G.3    Kolter, R.4    Storz, G.5
  • 88
    • 0027285868 scopus 로고
    • Lrp, a major regulatory protein in Escherichia coli, bends DNA and can organize the assembly of a higher-order nucleoprotein structure
    • Wang, Q. and Calvo, J.M. (1993) Lrp, a major regulatory protein in Escherichia coli, bends DNA and can organize the assembly of a higher-order nucleoprotein structure. EMBO J., 12, 2495-2501.
    • (1993) EMBO J. , vol.12 , pp. 2495-2501
    • Wang, Q.1    Calvo, J.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.