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Volumn 13, Issue 20, 2013, Pages 2984-2988

In-depth proteomic analysis of mouse microglia using a combination of FASP and StageTip-based, high pH, reversed-phase fractionation

Author keywords

Cell biology; High pH reversed phase fractionation; Microglia; Protein profile; Technology

Indexed keywords

PROTEOME;

EID: 84885407972     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201300091     Document Type: Article
Times cited : (32)

References (22)
  • 2
    • 80355143546 scopus 로고    scopus 로고
    • Microglial cell origin and phenotypes in health and disease
    • Saijo, K., Glass, C. K., Microglial cell origin and phenotypes in health and disease. Nat. Rev. Immunol. 2011, 11, 775-787.
    • (2011) Nat. Rev. Immunol. , vol.11 , pp. 775-787
    • Saijo, K.1    Glass, C.K.2
  • 4
    • 84862914241 scopus 로고    scopus 로고
    • Proteomic analysis of rat microglia establishes a high-confidence reference data set of over 3000 proteins
    • Bell-Temin, H., Barber, D. S., Zhang, P., Liu, B., Stevens, S. M., Jr., Proteomic analysis of rat microglia establishes a high-confidence reference data set of over 3000 proteins. Proteomics 2012, 12, 246-250.
    • (2012) Proteomics , vol.12 , pp. 246-250
    • Bell-Temin, H.1    Barber, D.S.2    Zhang, P.3    Liu, B.4    Stevens Jr, S.M.5
  • 5
    • 67650966680 scopus 로고    scopus 로고
    • Microglial physiology: unique stimuli, specialized responses
    • Ransohoff, R. M., Perry, V. H., Microglial physiology: unique stimuli, specialized responses. Ann. Rev. Immunol. 2009, 27, 119-145.
    • (2009) Ann. Rev. Immunol. , vol.27 , pp. 119-145
    • Ransohoff, R.M.1    Perry, V.H.2
  • 6
    • 84861602597 scopus 로고    scopus 로고
    • A comparative review of cell culture systems for the study of microglial biology in Alzheimer's disease
    • Stansley, B., Post, J., Hensley, K., A comparative review of cell culture systems for the study of microglial biology in Alzheimer's disease. J. Neuroinflamm. 2012, 9, 115.
    • (2012) J. Neuroinflamm. , vol.9 , pp. 115
    • Stansley, B.1    Post, J.2    Hensley, K.3
  • 7
    • 69949140066 scopus 로고    scopus 로고
    • The suitability of BV2 cells as alternative model system for primary microglia cultures or for animal experiments examining brain inflammation
    • Henn, A., Lund, S., Hedtjarn, M., Schrattenholz, A. etal., The suitability of BV2 cells as alternative model system for primary microglia cultures or for animal experiments examining brain inflammation. Altex 2009, 26, 83-94.
    • (2009) Altex , vol.26 , pp. 83-94
    • Henn, A.1    Lund, S.2    Hedtjarn, M.3    Schrattenholz, A.4
  • 8
    • 84859586780 scopus 로고    scopus 로고
    • Comprehensive phosphoproteome analysis of INS-1 pancreatic beta-cells using various digestion strategies coupled with liquid chromatography-tandem mass spectrometry
    • Han, D., Moon, S., Kim, Y., Ho, W. K. etal., Comprehensive phosphoproteome analysis of INS-1 pancreatic beta-cells using various digestion strategies coupled with liquid chromatography-tandem mass spectrometry. J. Proteome Res. 2012, 11, 2206-2223.
    • (2012) J. Proteome Res. , vol.11 , pp. 2206-2223
    • Han, D.1    Moon, S.2    Kim, Y.3    Ho, W.K.4
  • 9
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • Wisniewski, J. R., Zougman, A., Nagaraj, N., Mann, M., Universal sample preparation method for proteome analysis. Nat. Methods 2009, 6, 359-362.
    • (2009) Nat. Methods , vol.6 , pp. 359-362
    • Wisniewski, J.R.1    Zougman, A.2    Nagaraj, N.3    Mann, M.4
  • 10
    • 34548183872 scopus 로고    scopus 로고
    • Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips
    • Rappsilber, J., Mann, M., Ishihama, Y., Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips. Nat. Protocols 2007, 2, 1896-1906.
    • (2007) Nat. Protocols , vol.2 , pp. 1896-1906
    • Rappsilber, J.1    Mann, M.2    Ishihama, Y.3
  • 11
    • 79955752894 scopus 로고    scopus 로고
    • Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
    • Wang, Y., Yang, F., Gritsenko, M. A., Wang, Y. etal., Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells. Proteomics 2011, 11, 2019-2026.
    • (2011) Proteomics , vol.11 , pp. 2019-2026
    • Wang, Y.1    Yang, F.2    Gritsenko, M.A.3    Wang, Y.4
  • 12
    • 57449099865 scopus 로고    scopus 로고
    • MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
    • Cox, J., Mann, M., MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 2008, 26, 1367-1372.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1367-1372
    • Cox, J.1    Mann, M.2
  • 13
    • 79953701087 scopus 로고    scopus 로고
    • Andromeda: a peptide search engine integrated into the MaxQuant environment
    • Cox, J., Neuhauser, N., Michalski, A., Scheltema, R. A. etal., Andromeda: a peptide search engine integrated into the MaxQuant environment. J. Proteome Res. 2011, 10, 1794-1805.
    • (2011) J. Proteome Res. , vol.10 , pp. 1794-1805
    • Cox, J.1    Neuhauser, N.2    Michalski, A.3    Scheltema, R.A.4
  • 14
    • 0037249501 scopus 로고    scopus 로고
    • PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification
    • Thomas, P. D., Kejariwal, A., Campbell, M. J., Mi, H. etal., PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification. Nucleic Acids Res. 2003, 31, 334-341.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 334-341
    • Thomas, P.D.1    Kejariwal, A.2    Campbell, M.J.3    Mi, H.4
  • 15
    • 84874762979 scopus 로고    scopus 로고
    • The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013
    • Vizcaino, J. A., Cote, R. G., Csordas, A., Dianes, J. A. etal., The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013. Nucleic Acids Res. 2013, 41, D1063-D1069.
    • (2013) Nucleic Acids Res. , vol.41
    • Vizcaino, J.A.1    Cote, R.G.2    Csordas, A.3    Dianes, J.A.4
  • 16
    • 34547763842 scopus 로고    scopus 로고
    • Modulation of microglial/macrophage activation by macrophage inhibitory factor (TKP) or tuftsin (TKPR) attenuates the disease course of experimental autoimmune encephalomyelitis
    • Bhasin, M., Wu, M., Tsirka, S. E., Modulation of microglial/macrophage activation by macrophage inhibitory factor (TKP) or tuftsin (TKPR) attenuates the disease course of experimental autoimmune encephalomyelitis. BMC Immunol. 2007, 8, 10.
    • (2007) BMC Immunol. , vol.8 , pp. 10
    • Bhasin, M.1    Wu, M.2    Tsirka, S.E.3
  • 17
    • 0035096992 scopus 로고    scopus 로고
    • Microglial secreted cathepsin B induces neuronal apoptosis
    • Kingham, P. J., Pocock, J. M., Microglial secreted cathepsin B induces neuronal apoptosis. J. Neurochem. 2001, 76, 1475-1484.
    • (2001) J. Neurochem. , vol.76 , pp. 1475-1484
    • Kingham, P.J.1    Pocock, J.M.2
  • 18
    • 0035152836 scopus 로고    scopus 로고
    • Immune function of microglia
    • Aloisi, F., Immune function of microglia. Glia 2001, 36, 165-179.
    • (2001) Glia , vol.36 , pp. 165-179
    • Aloisi, F.1
  • 19
    • 79955040212 scopus 로고    scopus 로고
    • Not(ch) just development: notch signalling in the adult brain
    • Ables, J. L., Breunig, J. J., Eisch, A. J., Rakic, P., Not(ch) just development: notch signalling in the adult brain. Nat. Rev. Neurosci. 2011, 12, 269-283.
    • (2011) Nat. Rev. Neurosci. , vol.12 , pp. 269-283
    • Ables, J.L.1    Breunig, J.J.2    Eisch, A.J.3    Rakic, P.4
  • 20
    • 79959814264 scopus 로고    scopus 로고
    • Quantitative characterization and analysis of the dynamic NF-kappaB response in microglia
    • Sheppard, P. W., Sun, X., Emery, J. F., Giffard, R. G., Khammash, M., Quantitative characterization and analysis of the dynamic NF-kappaB response in microglia. BMC Bioinform. 2011, 12, 276.
    • (2011) BMC Bioinform. , vol.12 , pp. 276
    • Sheppard, P.W.1    Sun, X.2    Emery, J.F.3    Giffard, R.G.4    Khammash, M.5
  • 21
    • 60149098421 scopus 로고    scopus 로고
    • Debris clearance by microglia: an essential link between degeneration and regeneration
    • Neumann, H., Kotter, M. R., Franklin, R. J., Debris clearance by microglia: an essential link between degeneration and regeneration. J. Neurol. 2009, 132, 288-295.
    • (2009) J. Neurol. , vol.132 , pp. 288-295
    • Neumann, H.1    Kotter, M.R.2    Franklin, R.J.3
  • 22
    • 71549117585 scopus 로고    scopus 로고
    • Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome
    • Wisniewski, J. R., Zougman, A., Mann, M., Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome. J. Proteome Res. 2009, 8, 5674-5678.
    • (2009) J. Proteome Res. , vol.8 , pp. 5674-5678
    • Wisniewski, J.R.1    Zougman, A.2    Mann, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.