Biases in community structures of ammonia/ammonium-oxidizing microorganisms caused by insufficient DNA extractions from Baijiang soil revealed by comparative analysis of coastal wetland sediment and rice paddy soil

Applied Microbiology and Biotechnology

Volumn 97, Issue 19, 2013, Pages 8741-8756

  Han, Ping ^a   Li, Meng ^b   Gu, Ji Dong ^a,c  

^a UNIVERSITY OF HONG KONG   (Hong Kong)

^b UNIVERSITY OF MICHIGAN   (United States)

^c UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

Ammonia oxidizing archaea; Ammonia oxidizing bacteria; Anammox; DNA extraction

Indexed keywords

AMMONIA; CORRELATION METHODS; DNA; EXTRACTION; GENES; NITROGEN REMOVAL; POLYMERASE CHAIN REACTION; RNA; SEDIMENTS; SOILS; WASTEWATER TREATMENT; WETLANDS;

AMMONIA MONOOXYGENASE; AMMONIA OXIDIZING ARCHAEA (AOA); AMMONIA OXIDIZING BACTERIA; AMMONIA-OXIDIZING ARCHAEA; ANAMMOX; COMMUNITY STRUCTURES; DNA EXTRACTION; PEARSON CORRELATION ANALYSIS;

BACTERIA;

AMMONIA MONOOXYGENASE SUBUNIT A; BACTERIAL DNA; RNA 16S; UNCLASSIFIED DRUG; UNSPECIFIC MONOOXYGENASE;

ABUNDANCE; AMMONIA; COASTAL WETLAND; COMMUNITY STRUCTURE; DNA; GENE; MICROORGANISM; PADDY FIELD; RICE; SOIL FERTILITY;

AMMONIA OXIDIZING ARCHAEON; AMMONIA OXIDIZING BACTERIUM; AMOA GENE; ANAMMOX BACTERIUM; ARTICLE; BACTERIAL GENE; BACTERIUM DETECTION; BIODIVERSITY; CHINA; COMMUNITY STRUCTURE; COMPARATIVE STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA EXTRACTION; HONG KONG; KUENENIA; MARINE BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; SCALINDUA; SEDIMENT; SOIL; UNINDEXED SEQUENCE; WETLAND;

CHINA; HONG KONG; MAI PO NATURE RESERVE; NEW TERRITORIES;

ARCHAEA; BACTERIA (MICROORGANISMS); CANDIDATUS SCALINDUA; KUENENIA; NITROSOMONADALES;

AMMONIA; AMMONIUM COMPOUNDS; ARCHAEA; BACTERIA; BIOTA; CHINA; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA, ARCHAEAL; DNA, BACTERIAL; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; OXIDATION-REDUCTION; OXIDOREDUCTASES; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SPECIMEN HANDLING; WETLANDS;

EID: 84885381908     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-013-5169-2     Document Type: Article

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