-
1
-
-
84876440888
-
CRISPR-Cas systems and RNA-guided interference
-
Barrangou R. CRISPR-Cas systems and RNA-guided interference. WileyInterdiscip Rev RNA 2013, 4:267-278.
-
(2013)
WileyInterdiscip Rev RNA
, vol.4
, pp. 267-278
-
-
Barrangou, R.1
-
2
-
-
49649114086
-
Small CRISPR RNAs guide antiviral defense in prokaryotes
-
Brouns S.J.J., Jore M.M., Lundgren M., Westra E.R., Slijkhuis R.J.H., Snijders A.P., Dickman M.J., Makarova K.S., Koonin E.V., van der Oost J. Small CRISPR RNAs guide antiviral defense in prokaryotes. Science 2008, 321:960-964.
-
(2008)
Science
, vol.321
, pp. 960-964
-
-
Brouns, S.J.J.1
Jore, M.M.2
Lundgren, M.3
Westra, E.R.4
Slijkhuis, R.J.H.5
Snijders, A.P.6
Dickman, M.J.7
Makarova, K.S.8
Koonin, E.V.9
van der Oost, J.10
-
3
-
-
58049191229
-
Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes
-
Carte J., Wang R., Li H., Terns R.M., Terns M.P. Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes. Genes Dev. 2008, 22:3489-3496.
-
(2008)
Genes Dev.
, vol.22
, pp. 3489-3496
-
-
Carte, J.1
Wang, R.2
Li, H.3
Terns, R.M.4
Terns, M.P.5
-
4
-
-
79953250082
-
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
-
Deltcheva E., Chylinski K., Sharma C.M., Gonzales K., Chao Y., Pirzada Z.A., Eckert M.R., Vogel J., Charpentier E. CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III. Nature 2011, 471:602-607.
-
(2011)
Nature
, vol.471
, pp. 602-607
-
-
Deltcheva, E.1
Chylinski, K.2
Sharma, C.M.3
Gonzales, K.4
Chao, Y.5
Pirzada, Z.A.6
Eckert, M.R.7
Vogel, J.8
Charpentier, E.9
-
5
-
-
84866859751
-
Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria
-
Gasiunas G., Barrangou R., Horvath P., Siksnys V. Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc. Natl. Acad. Sci. USA 2012, 109:E2579-E2586.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
-
-
Gasiunas, G.1
Barrangou, R.2
Horvath, P.3
Siksnys, V.4
-
6
-
-
70449753811
-
RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex
-
Hale C.R., Zhao P., Olson S., Duff M.O., Graveley B.R., Wells L., Terns R.M., Terns M.P. RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Cell 2009, 139:945-956.
-
(2009)
Cell
, vol.139
, pp. 945-956
-
-
Hale, C.R.1
Zhao, P.2
Olson, S.3
Duff, M.O.4
Graveley, B.R.5
Wells, L.6
Terns, R.M.7
Terns, M.P.8
-
7
-
-
84855475577
-
Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site
-
Hatoum-Aslan A., Maniv I., Marraffini L.A. Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site. Proc. Natl. Acad. Sci. USA 2011, 108:21218-21222.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 21218-21222
-
-
Hatoum-Aslan, A.1
Maniv, I.2
Marraffini, L.A.3
-
8
-
-
84884765703
-
Aruler protein in a complex for antiviral defense determines the length of smallinterfering CRISPR RNAs
-
in press. Published online August 9, 2013
-
Hatoum-Aslan A., Samai P., Maniv I., Jiang W., Marraffini L.A. Aruler protein in a complex for antiviral defense determines the length of smallinterfering CRISPR RNAs. J.Biol. Chem. 2013, in press. Published online August 9, 2013. 10.1074/jbc.M113.499244.
-
(2013)
J.Biol. Chem.
-
-
Hatoum-Aslan, A.1
Samai, P.2
Maniv, I.3
Jiang, W.4
Marraffini, L.A.5
-
9
-
-
77956498326
-
Sequence- and structure-specific RNA processing by a CRISPR endonuclease
-
Haurwitz R.E., Jinek M., Wiedenheft B., Zhou K., Doudna J.A. Sequence- and structure-specific RNA processing by a CRISPR endonuclease. Science 2010, 329:1355-1358.
-
(2010)
Science
, vol.329
, pp. 1355-1358
-
-
Haurwitz, R.E.1
Jinek, M.2
Wiedenheft, B.3
Zhou, K.4
Doudna, J.A.5
-
10
-
-
84865070369
-
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
-
Jinek M., Chylinski K., Fonfara I., Hauer M., Doudna J.A., Charpentier E. A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science 2012, 337:816-821.
-
(2012)
Science
, vol.337
, pp. 816-821
-
-
Jinek, M.1
Chylinski, K.2
Fonfara, I.3
Hauer, M.4
Doudna, J.A.5
Charpentier, E.6
-
11
-
-
79955574254
-
Structural basis for CRISPR RNA-guided DNA recognition by Cascade
-
Jore M.M., Lundgren M., van Duijn E., Bultema J.B., Westra E.R., Waghmare S.P., Wiedenheft B., Pul U., Wurm R., Wagner R., et al. Structural basis for CRISPR RNA-guided DNA recognition by Cascade. Nat. Struct. Mol. Biol. 2011, 18:529-536.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 529-536
-
-
Jore, M.M.1
Lundgren, M.2
van Duijn, E.3
Bultema, J.B.4
Westra, E.R.5
Waghmare, S.P.6
Wiedenheft, B.7
Pul, U.8
Wurm, R.9
Wagner, R.10
-
13
-
-
79958754524
-
Structural and functional characterization of an archaeal clustered regularly interspaced short palindromic repeat (CRISPR)-associated complex for antiviral defense (CASCADE)
-
Lintner N.G., Kerou M., Brumfield S.K., Graham S., Liu H., Naismith J.H., Sdano M., Peng N., She Q., Copié V., et al. Structural and functional characterization of an archaeal clustered regularly interspaced short palindromic repeat (CRISPR)-associated complex for antiviral defense (CASCADE). J.Biol. Chem. 2011, 286:21643-21656.
-
(2011)
J.Biol. Chem.
, vol.286
, pp. 21643-21656
-
-
Lintner, N.G.1
Kerou, M.2
Brumfield, S.K.3
Graham, S.4
Liu, H.5
Naismith, J.H.6
Sdano, M.7
Peng, N.8
She, Q.9
Copié, V.10
-
14
-
-
34248374277
-
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
-
Makarova K.S., Grishin N.V., Shabalina S.A., Wolf Y.I., Koonin E.V. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 2006, 1:7.
-
(2006)
Biol. Direct
, vol.1
, pp. 7
-
-
Makarova, K.S.1
Grishin, N.V.2
Shabalina, S.A.3
Wolf, Y.I.4
Koonin, E.V.5
-
15
-
-
70849123800
-
Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements
-
Makarova K.S., Wolf Y.I., van der Oost J., Koonin E.V. Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements. Biol. Direct 2009, 4:29.
-
(2009)
Biol. Direct
, vol.4
, pp. 29
-
-
Makarova, K.S.1
Wolf, Y.I.2
van der Oost, J.3
Koonin, E.V.4
-
16
-
-
79960554003
-
Unification ofCas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems
-
Makarova K.S., Aravind L., Wolf Y.I., Koonin E.V. Unification ofCas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems. Biol. Direct 2011, 6:38.
-
(2011)
Biol. Direct
, vol.6
, pp. 38
-
-
Makarova, K.S.1
Aravind, L.2
Wolf, Y.I.3
Koonin, E.V.4
-
17
-
-
79956157571
-
Evolution and classification of the CRISPR-Cas systems
-
Makarova K.S., Haft D.H., Barrangou R., Brouns S.J.J., Charpentier E., Horvath P., Moineau S., Mojica F.J.M., Wolf Y.I., Yakunin A.F., et al. Evolution and classification of the CRISPR-Cas systems. Nat. Rev. Microbiol. 2011, 9:467-477.
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 467-477
-
-
Makarova, K.S.1
Haft, D.H.2
Barrangou, R.3
Brouns, S.J.J.4
Charpentier, E.5
Horvath, P.6
Moineau, S.7
Mojica, F.J.M.8
Wolf, Y.I.9
Yakunin, A.F.10
-
18
-
-
57849137502
-
CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA
-
Marraffini L.A., Sontheimer E.J. CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA. Science 2008, 322:1843-1845.
-
(2008)
Science
, vol.322
, pp. 1843-1845
-
-
Marraffini, L.A.1
Sontheimer, E.J.2
-
19
-
-
84865704094
-
Cas5d protein processes pre-crRNA and assembles into a cascade-like interference complex in subtype I-C/Dvulg CRISPR-Cas system
-
Nam K.H., Haitjema C., Liu X., Ding F., Wang H., DeLisa M.P., Ke A. Cas5d protein processes pre-crRNA and assembles into a cascade-like interference complex in subtype I-C/Dvulg CRISPR-Cas system. Structure 2012, 20:1574-1584.
-
(2012)
Structure
, vol.20
, pp. 1574-1584
-
-
Nam, K.H.1
Haitjema, C.2
Liu, X.3
Ding, F.4
Wang, H.5
DeLisa, M.P.6
Ke, A.7
-
20
-
-
84879584456
-
CRISPR interference: a structural perspective
-
Reeks J., Naismith J.H., White M.F. CRISPR interference: a structural perspective. Biochem. J. 2013, 453:155-166.
-
(2013)
Biochem. J.
, vol.453
, pp. 155-166
-
-
Reeks, J.1
Naismith, J.H.2
White, M.F.3
-
21
-
-
84885336337
-
Structure of the CRISPR Interference Complex CSM reveals key similarities with Cascade
-
this issue
-
Rouillon C., Zhou M., Zhang J., Politis A., Beilsten V., Graham S., Robinson C.V., Spagnolo L., White M.F. Structure of the CRISPR Interference Complex CSM reveals key similarities with Cascade. Mol. Cell 2013, 52:124-134. this issue.
-
(2013)
Mol. Cell
, vol.52
, pp. 124-134
-
-
Rouillon, C.1
Zhou, M.2
Zhang, J.3
Politis, A.4
Beilsten, V.5
Graham, S.6
Robinson, C.V.7
Spagnolo, L.8
White, M.F.9
-
22
-
-
84885355637
-
Structure of an RNA Silencing Complex of the CRISPR-Cas immune system
-
this issue
-
Spilman M., Cocozaki A., Hale C., Shao Y., Ramia N. Structure of an RNA Silencing Complex of the CRISPR-Cas immune system. Mol. Cell 2013, 52:146-152. this issue.
-
(2013)
Mol. Cell
, vol.52
, pp. 146-152
-
-
Spilman, M.1
Cocozaki, A.2
Hale, C.3
Shao, Y.4
Ramia, N.5
-
23
-
-
84885334898
-
Structure and activity of an RNA-targeting Type III-B CRISPR-Cas complex in
-
this issue
-
Staals R.H.J., Agari Y., Maki-yonekura S., Zhu Y., David W., Sakamoto K., Masuda A., Dohmae N., Schaap P.J., Jennifer A. Structure and activity of an RNA-targeting Type III-B CRISPR-Cas complex in. Mol. Cell 2013, 52:135-145. this issue.
-
(2013)
Mol. Cell
, vol.52
, pp. 135-145
-
-
Staals, R.H.J.1
Agari, Y.2
Maki-yonekura, S.3
Zhu, Y.4
David, W.5
Sakamoto, K.6
Masuda, A.7
Dohmae, N.8
Schaap, P.J.9
Jennifer, A.10
-
24
-
-
79960029056
-
RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions
-
Wiedenheft B., van Duijn E., Bultema J.B., Waghmare S.P., Zhou K., Barendregt A., Westphal W., Heck A.J., Boekema E.J., Dickman M.J., Doudna J.A. RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions. Proc. Natl. Acad. Sci. USA 2011, 108:10092-10097.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 10092-10097
-
-
Wiedenheft, B.1
van Duijn, E.2
Bultema, J.B.3
Waghmare, S.P.4
Zhou, K.5
Barendregt, A.6
Westphal, W.7
Heck, A.J.8
Boekema, E.J.9
Dickman, M.J.10
Doudna, J.A.11
-
25
-
-
80053169737
-
Structures of the RNA-guided surveillance complex from a bacterial immune system
-
Wiedenheft B., Lander G.C., Zhou K., Jore M.M., Brouns S.J.J., van der Oost J., Doudna J.A., Nogales E. Structures of the RNA-guided surveillance complex from a bacterial immune system. Nature 2011, 477:486-489.
-
(2011)
Nature
, vol.477
, pp. 486-489
-
-
Wiedenheft, B.1
Lander, G.C.2
Zhou, K.3
Jore, M.M.4
Brouns, S.J.J.5
van der Oost, J.6
Doudna, J.A.7
Nogales, E.8
-
26
-
-
84856778250
-
Structure and mechanism of the CMR complex for CRISPR-mediated antiviral immunity
-
Zhang J., Rouillon C., Kerou M., Reeks J., Brugger K., Graham S., Reimann J., Cannone G., Liu H., Albers S.-V., et al. Structure and mechanism of the CMR complex for CRISPR-mediated antiviral immunity. Mol. Cell 2012, 45:303-313.
-
(2012)
Mol. Cell
, vol.45
, pp. 303-313
-
-
Zhang, J.1
Rouillon, C.2
Kerou, M.3
Reeks, J.4
Brugger, K.5
Graham, S.6
Reimann, J.7
Cannone, G.8
Liu, H.9
Albers, S.-V.10
-
27
-
-
84878193178
-
Processing-independent CRISPR RNAs limit natural transformation in Neisseria meningitidis
-
Zhang Y., Heidrich N., Ampattu B.J., Gunderson C.W., Seifert H.S., Schoen C., Vogel J., Sontheimer E.J. Processing-independent CRISPR RNAs limit natural transformation in Neisseria meningitidis. Mol. Cell 2013, 50:488-503.
-
(2013)
Mol. Cell
, vol.50
, pp. 488-503
-
-
Zhang, Y.1
Heidrich, N.2
Ampattu, B.J.3
Gunderson, C.W.4
Seifert, H.S.5
Schoen, C.6
Vogel, J.7
Sontheimer, E.J.8
|