-
2
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders S, Huber W. 2010. Differential expression analysis for sequence count data. Genome Biol 11: R106.
-
(2010)
Genome Biol
, vol.11
-
-
Anders, S.1
Huber, W.2
-
3
-
-
0242509262
-
SUMO-2/3 regulates topoisomerase II in mitosis
-
Azuma Y, Arnaoutov A, Dasso M. 2003. SUMO-2/3 regulates topoisomerase II in mitosis. J Cell Biol 163: 477-487.
-
(2003)
J Cell Biol
, vol.163
, pp. 477-487
-
-
Azuma, Y.1
Arnaoutov, A.2
Dasso, M.3
-
4
-
-
84855695113
-
Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation
-
Benhaddou A, Keime C, Ye T, Morlon A, Michel I, Jost B, Mengus G, Davidson I. 2012. Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation. Cell Death Differ 19: 220-231.
-
(2012)
Cell Death Differ
, vol.19
, pp. 220-231
-
-
Benhaddou, A.1
Keime, C.2
Ye, T.3
Morlon, A.4
Michel, I.5
Jost, B.6
Mengus, G.7
Davidson, I.8
-
5
-
-
33745210316
-
The E3 SUMO ligase PIASy is a regulator of cellular senescence and apoptosis
-
Bischof O, Schwamborn K, Martin N, Werner A, Sustmann C, Grosschedl R, Dejean A. 2006. The E3 SUMO ligase PIASy is a regulator of cellular senescence and apoptosis. Mol Cell 22: 783-794.
-
(2006)
Mol Cell
, vol.22
, pp. 783-794
-
-
Bischof, O.1
Schwamborn, K.2
Martin, N.3
Werner, A.4
Sustmann, C.5
Grosschedl, R.6
Dejean, A.7
-
6
-
-
79951874562
-
Characterization of the contradictory chromatin signatures at the 39 exons of zinc finger genes
-
Blahnik KR, Dou L, Echipare L, Iyengar S, O'Geen H, Sanchez E, Zhao Y, Marra MA, Hirst M, Costello JF, et al. 2011. Characterization of the contradictory chromatin signatures at the 39 exons of zinc finger genes. PLoS ONE 6: e17121.
-
(2011)
PLoS ONE
, vol.6
-
-
Blahnik, K.R.1
Dou, L.2
Echipare, L.3
Iyengar, S.4
O'Geen, H.5
Sanchez, E.6
Zhao, Y.7
Marra, M.A.8
Hirst, M.9
Costello, J.F.10
-
7
-
-
84864297655
-
Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation
-
Chandra T, Kirschner K, Thuret JY, Pope BD, Ryba T, Newman S, Ahmed K, Samarajiwa SA, Salama R, Carroll T, et al. 2012. Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation. Mol Cell 47: 203-214.
-
(2012)
Mol Cell
, vol.47
, pp. 203-214
-
-
Chandra, T.1
Kirschner, K.2
Thuret, J.Y.3
Pope, B.D.4
Ryba, T.5
Newman, S.6
Ahmed, K.7
Samarajiwa, S.A.8
Salama, R.9
Carroll, T.10
-
8
-
-
84861868041
-
H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence
-
Chicas A, Kapoor A, Wang X, Aksoy O, Evertts AG, Zhang MQ, Garcia BA, Bernstein E, Lowe SW. 2012. H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence. Proc Natl Acad Sci 109: 8971-8976.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 8971-8976
-
-
Chicas, A.1
Kapoor, A.2
Wang, X.3
Aksoy, O.4
Evertts, A.G.5
Zhang, M.Q.6
Garcia, B.A.7
Bernstein, E.8
Lowe, S.W.9
-
9
-
-
80054789761
-
Control of the senescence-associated secretory phenotype by NF-kB promotes senescence and enhances chemosensitivity
-
Chien Y, Scuoppo C, Wang X, Fang X, Balgley B, Bolden JE, Premsrirut P, Luo W, Chicas A, Lee CS, et al. 2011. Control of the senescence-associated secretory phenotype by NF-kB promotes senescence and enhances chemosensitivity. Genes Dev 25: 2125-2136.
-
(2011)
Genes Dev
, vol.25
, pp. 2125-2136
-
-
Chien, Y.1
Scuoppo, C.2
Wang, X.3
Fang, X.4
Balgley, B.5
Bolden, J.E.6
Premsrirut, P.7
Luo, W.8
Chicas, A.9
Lee, C.S.10
-
10
-
-
84857840693
-
Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome
-
Choukrallah MA, Kobi D, Martianov I, Pijnappel WW, Mischerikow N, Ye T, Heck AJ, Timmers HT, Davidson I. 2012. Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome. Nucleic Acids Res 40: 1446-1459.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 1446-1459
-
-
Choukrallah, M.A.1
Kobi, D.2
Martianov, I.3
Pijnappel, W.W.4
Mischerikow, N.5
Ye, T.6
Heck, A.J.7
Timmers, H.T.8
Davidson, I.9
-
11
-
-
67650601695
-
Paused Pol II captures enhancer activity and acts as a potent insulator
-
Core LJ, Lis JT. 2009. Paused Pol II captures enhancer activity and acts as a potent insulator. Genes Dev 23: 1606-1612.
-
(2009)
Genes Dev
, vol.23
, pp. 1606-1612
-
-
Core, L.J.1
Lis, J.T.2
-
12
-
-
78650446724
-
Sumoylation by Ubc9 regulates the stem cell compartment and structure and function of the intestinal epithelium in mice
-
Demarque MD, Nacerddine K, Neyret-Kahn H, Andrieux A, Danenberg E, Jouvion G, Bomme P, Hamard G, Romagnolo B, Terris B, et al. 2011. Sumoylation by Ubc9 regulates the stem cell compartment and structure and function of the intestinal epithelium in mice. Gastroenterology 140: 286-296.
-
(2011)
Gastroenterology
, vol.140
, pp. 286-296
-
-
Demarque, M.D.1
Nacerddine, K.2
Neyret-Kahn, H.3
Andrieux, A.4
Danenberg, E.5
Jouvion, G.6
Bomme, P.7
Hamard, G.8
Romagnolo, B.9
Terris, B.10
-
13
-
-
84875391572
-
Ensembl 2013
-
Flicek P, Ahmed I, Amode MR, Barrell D, Beal K, Brent S, Carvalho-Silva D, Clapham P, Coates G, Fairley S, et al. 2013. Ensembl 2013. Nucleic Acids Res 41: D48-D55.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Flicek, P.1
Ahmed, I.2
Amode, M.R.3
Barrell, D.4
Beal, K.5
Brent, S.6
Carvalho-Silva, D.7
Clapham, P.8
Coates, G.9
Fairley, S.10
-
15
-
-
84859051225
-
Inheritance of silent rDNA chromatin is mediated by PARP1 via noncoding RNA
-
Guetg C, Scheifele F, Rosenthal F, Hottiger MO, Santoro R. 2012. Inheritance of silent rDNA chromatin is mediated by PARP1 via noncoding RNA. Mol Cell 45: 790-800.
-
(2012)
Mol Cell
, vol.45
, pp. 790-800
-
-
Guetg, C.1
Scheifele, F.2
Rosenthal, F.3
Hottiger, M.O.4
Santoro, R.5
-
16
-
-
21244491441
-
Regulation of histone synthesis and nucleosome assembly
-
Gunjan A, Paik J, Verreault A. 2005. Regulation of histone synthesis and nucleosome assembly. Biochimie 87: 625-635.
-
(2005)
Biochimie
, vol.87
, pp. 625-635
-
-
Gunjan, A.1
Paik, J.2
Verreault, A.3
-
17
-
-
46149092730
-
Regulation of IRF2 transcriptional activity by its sumoylation
-
Han KJ, Jiang L, Shu HB. 2008. Regulation of IRF2 transcriptional activity by its sumoylation. Biochem Biophys Res Commun 372: 772-778.
-
(2008)
Biochem Biophys Res Commun
, vol.372
, pp. 772-778
-
-
Han, K.J.1
Jiang, L.2
Shu, H.B.3
-
18
-
-
15944406765
-
SUMO: A history of modification
-
Hay RT. 2005. SUMO: A history of modification. Mol Cell 18: 1-12.
-
(2005)
Mol Cell
, vol.18
, pp. 1-12
-
-
Hay, R.T.1
-
19
-
-
63649113699
-
Origin and function of ubiquitin-like proteins
-
Hochstrasser M. 2009. Origin and function of ubiquitin-like proteins. Nature 458: 422-429.
-
(2009)
Nature
, vol.458
, pp. 422-429
-
-
Hochstrasser, M.1
-
20
-
-
84857047339
-
PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
-
Hornbeck PV, Kornhauser JM, Tkachev S, Zhang B, Skrzypek E, Murray B, Latham V, Sullivan M. 2012. PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res 40: D261-D270.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Hornbeck, P.V.1
Kornhauser, J.M.2
Tkachev, S.3
Zhang, B.4
Skrzypek, E.5
Murray, B.6
Latham, V.7
Sullivan, M.8
-
21
-
-
36749009119
-
PHD domain-mediated E3 ligase activity directs intramolecular sumoylation of an adjacent bromodomain required for gene silencing
-
Ivanov AV, Peng H, Yurchenko V, Yap KL, Negorev DG, Schultz DC, Psulkowski E, Fredericks WJ, White DE, Maul GG, et al. 2007. PHD domain-mediated E3 ligase activity directs intramolecular sumoylation of an adjacent bromodomain required for gene silencing. Mol Cell 28: 823-837.
-
(2007)
Mol Cell
, vol.28
, pp. 823-837
-
-
Ivanov, A.V.1
Peng, H.2
Yurchenko, V.3
Yap, K.L.4
Negorev, D.G.5
Schultz, D.C.6
Psulkowski, E.7
Fredericks, W.J.8
White, D.E.9
Maul, G.G.10
-
22
-
-
78651332744
-
Sumoylation modulates a domain in CTCF that activates transcription and decondenses chromatin
-
Kitchen NS, Schoenherr CJ. 2010. Sumoylation modulates a domain in CTCF that activates transcription and decondenses chromatin. J Cell Biochem 111: 665-675.
-
(2010)
J Cell Biochem
, vol.111
, pp. 665-675
-
-
Kitchen, N.S.1
Schoenherr, C.J.2
-
23
-
-
62349094844
-
GPAT: Retrieval of genomic annotation from large genomic position datasets
-
Krebs A, Frontini M, Tora L. 2008. GPAT: Retrieval of genomic annotation from large genomic position datasets. BMC Bioinformatics 9: 533.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 533
-
-
Krebs, A.1
Frontini, M.2
Tora, L.3
-
24
-
-
43049096803
-
Arsenic degrades PML or PMLRARa through a SUMO-triggered RNF4/ubiquitin-mediated pathway
-
Lallemand-Breitenbach V, Jeanne M, Benhenda S, Nasr R, Lei M, Peres L, Zhou J, Zhu J, Raught B, de Thé H. 2008. Arsenic degrades PML or PMLRARa through a SUMO-triggered RNF4/ubiquitin-mediated pathway. Nat Cell Biol 10: 547-555.
-
(2008)
Nat Cell Biol
, vol.10
, pp. 547-555
-
-
Lallemand-Breitenbach, V.1
Jeanne, M.2
Benhenda, S.3
Nasr, R.4
Lei, M.5
Peres, L.6
Zhou, J.7
Zhu, J.8
Raught, B.9
De Thé, H.10
-
25
-
-
84869071444
-
Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes
-
Liu HW, Zhang J, Heine GF, Arora M, Gulcin Ozer H, Onti-Srinivasan R, Huang K, Parvin JD. 2012. Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes. Nucleic Acids Res 40: 10172-10186.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 10172-10186
-
-
Liu, H.W.1
Zhang, J.2
Heine, G.F.3
Arora, M.4
Gulcin Ozer, H.5
Onti-Srinivasan, R.6
Huang, K.7
Parvin, J.D.8
-
26
-
-
37749021009
-
A role for SUMO modification in transcriptional repression and activation
-
Lyst MJ, Stancheva I. 2007. A role for SUMO modification in transcriptional repression and activation. Biochem Soc Trans 35: 1389-1392.
-
(2007)
Biochem Soc Trans
, vol.35
, pp. 1389-1392
-
-
Lyst, M.J.1
Stancheva, I.2
-
27
-
-
59249092289
-
The CTCF insulator protein is posttranslationally modified by SUMO
-
MacPherson MJ, Beatty LG, Zhou W, Du M, Sadowski PD. 2009. The CTCF insulator protein is posttranslationally modified by SUMO. Mol Cell Biol 29: 714-725.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 714-725
-
-
MacPherson, M.J.1
Beatty, L.G.2
Zhou, W.3
Du, M.4
Sadowski, P.D.5
-
28
-
-
84866112974
-
H2B Tyr37 phosphorylation suppresses expression of replication-dependent core histone genes
-
Mahajan K, Fang B, Koomen JM, Mahajan NP. 2012. H2B Tyr37 phosphorylation suppresses expression of replication-dependent core histone genes. Nat Struct Mol Biol 19: 930-937.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 930-937
-
-
Mahajan, K.1
Fang, B.2
Koomen, J.M.3
Mahajan, N.P.4
-
29
-
-
79952189085
-
SUMOylation promotes de novo targeting of HP1a to pericentric heterochromatin
-
Maison C, Bailly D, Roche D, de Oca RM, Probst AV, Vassias I, Dingli F, Lombard B, Loew D, Quivy JP, et al. 2011. SUMOylation promotes de novo targeting of HP1a to pericentric heterochromatin. Nat Genet 43: 220-227.
-
(2011)
Nat Genet
, vol.43
, pp. 220-227
-
-
Maison, C.1
Bailly, D.2
Roche, D.3
De Oca, R.M.4
Probst, A.V.5
Vassias, I.6
Dingli, F.7
Lombard, B.8
Loew, D.9
Quivy, J.P.10
-
30
-
-
70450255284
-
PARP-1 transcriptional activity is regulated by sumoylation upon heat shock
-
Martin N, Schwamborn K, Schreiber V, Werner A, Guillier C, Zhang XD, Bischof O, Seeler JS, Dejean A. 2009. PARP-1 transcriptional activity is regulated by sumoylation upon heat shock. EMBO J 28: 3534-3548.
-
(2009)
EMBO J
, vol.28
, pp. 3534-3548
-
-
Martin, N.1
Schwamborn, K.2
Schreiber, V.3
Werner, A.4
Guillier, C.5
Zhang, X.D.6
Bischof, O.7
Seeler, J.S.8
Dejean, A.9
-
31
-
-
54149091257
-
Metabolism and regulation of canonical histone mRNAs: Life without a poly(A) tail
-
Marzluff WF, Wagner EJ, Duronio RJ. 2008. Metabolism and regulation of canonical histone mRNAs: Life without a poly(A) tail. Nat Rev Genet 9: 843-854.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 843-854
-
-
Marzluff, W.F.1
Wagner, E.J.2
Duronio, R.J.3
-
32
-
-
77952214662
-
GREAT improves functional interpretation of cisregulatory regions
-
McLean CY, Bristor D, Hiller M, Clarke SL, Schaar BT, Lowe CB, Wenger AM, Bejerano G. 2010. GREAT improves functional interpretation of cisregulatory regions. Nat Biotechnol 28: 495-501.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 495-501
-
-
McLean, C.Y.1
Bristor, D.2
Hiller, M.3
Clarke, S.L.4
Schaar, B.T.5
Lowe, C.B.6
Wenger, A.M.7
Bejerano, G.8
-
33
-
-
0033756308
-
Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: Assembly of prereplication complexes in late mitosis
-
Méndez J, Stillman B. 2000. Chromatin association of human origin recognition complex, cdc6, and minichromosome maintenance proteins during the cell cycle: Assembly of prereplication complexes in late mitosis. Mol Cell Biol 20: 8602-8612.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 8602-8612
-
-
Méndez, J.1
Stillman, B.2
-
34
-
-
0037667702
-
Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence
-
Narita M, Nuñez S, Heard E, Narita M, Lin AW, Hearn SA, Spector DL, Hannon GJ, Lowe SW. 2003. Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular senescence. Cell 113: 703-716.
-
(2003)
Cell
, vol.113
, pp. 703-716
-
-
Narita, M.1
Nuñez, S.2
Heard, E.3
Narita, M.4
Lin, A.W.5
Hearn, S.A.6
Spector, D.L.7
Hannon, G.J.8
Lowe, S.W.9
-
35
-
-
33746752125
-
A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation
-
Narita M, Narita M, Krizhanovsky V, Nunez S, Chicas A, Hearn SA, Myers MP, Lowe SW. 2006. A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation. Cell 126: 503-514.
-
(2006)
Cell
, vol.126
, pp. 503-514
-
-
Narita, M.1
Narita, M.2
Krizhanovsky, V.3
Nunez, S.4
Chicas, A.5
Hearn, S.A.6
Myers, M.P.7
Lowe, S.W.8
-
36
-
-
33645879818
-
Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications
-
Nathan D, Ingvarsdottir K, Sterner DE, Bylebyl GR, Dokmanovic M, Dorsey JA, Whelan KA, Krsmanovic M, Lane WS, Meluh PB, et al. 2006. Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications. Genes Dev 20: 966-976.
-
(2006)
Genes Dev
, vol.20
, pp. 966-976
-
-
Nathan, D.1
Ingvarsdottir, K.2
Sterner, D.E.3
Bylebyl, G.R.4
Dokmanovic, M.5
Dorsey, J.A.6
Whelan, K.A.7
Krsmanovic, M.8
Lane, W.S.9
Meluh, P.B.10
-
37
-
-
73449092854
-
SUMO engages multiple corepressors to regulate chromatin structure and transcription
-
Ouyang J, Gill G. 2009. SUMO engages multiple corepressors to regulate chromatin structure and transcription. Epigenetics 4: 440-444.
-
(2009)
Epigenetics
, vol.4
, pp. 440-444
-
-
Ouyang, J.1
Gill, G.2
-
38
-
-
4744360999
-
A proteome-wide approach identifies sumoylated substrate proteins in yeast
-
Panse VG, Hardeland U, Werner T, Kuster B, Hurt E. 2004. A proteome-wide approach identifies sumoylated substrate proteins in yeast. J Biol Chem 279: 41346-41351.
-
(2004)
J Biol Chem
, vol.279
, pp. 41346-41351
-
-
Panse, V.G.1
Hardeland, U.2
Werner, T.3
Kuster, B.4
Hurt, E.5
-
39
-
-
84869091913
-
Protein group modification and synergy in the SUMO pathway as exemplified in DNA repair
-
Psakhye I, Jentsch S. 2012. Protein group modification and synergy in the SUMO pathway as exemplified in DNA repair. Cell 151: 807-820.
-
(2012)
Cell
, vol.151
, pp. 807-820
-
-
Psakhye, I.1
Jentsch, S.2
-
40
-
-
84879598945
-
Covalent SUMO modification of Maf1 controls RNA polymerase III-dependent transcription repression
-
Rohira AD, Chen CY, Allen JR, Johnson DL. 2013. Covalent SUMO modification of Maf1 controls RNA polymerase III-dependent transcription repression. J Biol Chem288: 19288-19295.
-
(2013)
J Biol Chem
, vol.288
, pp. 19288-19295
-
-
Rohira, A.D.1
Chen, C.Y.2
Allen, J.R.3
Johnson, D.L.4
-
41
-
-
14644402420
-
A universal strategy for proteomic studies of SUMO and other ubiquitinlike modifiers
-
Rosas-Acosta G, Russell WK, Deyrieux A, Russell DH, Wilson VG. 2005. A universal strategy for proteomic studies of SUMO and other ubiquitinlike modifiers. Mol Cell Proteomics 4: 56-72.
-
(2005)
Mol Cell Proteomics
, vol.4
, pp. 56-72
-
-
Rosas-Acosta, G.1
Russell, W.K.2
Deyrieux, A.3
Russell, D.H.4
Wilson, V.G.5
-
42
-
-
77953929082
-
SUMO functions in constitutive transcription and during activation of inducible genes in yeast
-
Rosonina E, Duncan SM, Manley JL. 2010. SUMO functions in constitutive transcription and during activation of inducible genes in yeast. Genes Dev 24: 1242-1252.
-
(2010)
Genes Dev
, vol.24
, pp. 1242-1252
-
-
Rosonina, E.1
Duncan, S.M.2
Manley, J.L.3
-
43
-
-
46149113242
-
CTCF physically links cohesin to chromatin
-
Rubio ED, Reiss DJ, Welcsh PL, Disteche CM, Filippova GN, Baliga NS, Aebersold R, Ranish JA, Krumm A. 2008. CTCF physically links cohesin to chromatin. Proc Natl Acad Sci 105: 8309-8314.
-
(2008)
Proc Natl Acad Sci
, vol.105
, pp. 8309-8314
-
-
Rubio, E.D.1
Reiss, D.J.2
Welcsh, P.L.3
Disteche, C.M.4
Filippova, G.N.5
Baliga, N.S.6
Aebersold, R.7
Ranish, J.A.8
Krumm, A.9
-
44
-
-
0041837510
-
Nuclear and unclear functions of SUMO
-
Seeler JS, Dejean A. 2003. Nuclear and unclear functions of SUMO. Nat Rev Mol Cell Biol 4: 690-699.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 690-699
-
-
Seeler, J.S.1
Dejean, A.2
-
45
-
-
0034759620
-
PML bodies associate specifically with the MHC gene cluster in interphase nuclei
-
Shiels C, Islam SA, Vatcheva R, Sasieni P, Sternberg MJ, Freemont PS, Sheer D. 2001. PML bodies associate specifically with the MHC gene cluster in interphase nuclei. J Cell Sci 114: 3705-3716.
-
(2001)
J Cell Sci
, vol.114
, pp. 3705-3716
-
-
Shiels, C.1
Islam, S.A.2
Vatcheva, R.3
Sasieni, P.4
Sternberg, M.J.5
Freemont, P.S.6
Sheer, D.7
-
46
-
-
0344824404
-
Histone sumoylation is associated with transcriptional repression
-
Shiio Y, Eisenman RN. 2003. Histone sumoylation is associated with transcriptional repression. Proc Natl Acad Sci 100: 13225-13230.
-
(2003)
Proc Natl Acad Sci
, vol.100
, pp. 13225-13230
-
-
Shiio, Y.1
Eisenman, R.N.2
-
47
-
-
24944528328
-
SUMO modification is involved in the maintenance of heterochromatin stability in fission yeast
-
Shin JA, Choi ES, Kim HS, Ho JC, Watts FZ, Park SD, Jang YK. 2005. SUMO modification is involved in the maintenance of heterochromatin stability in fission yeast. Mol Cell 19: 817-828.
-
(2005)
Mol Cell
, vol.19
, pp. 817-828
-
-
Shin, J.A.1
Choi, E.S.2
Kim, H.S.3
Ho, J.C.4
Watts, F.Z.5
Park, S.D.6
Jang, Y.K.7
-
48
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
Trapnell C, Pachter L, Salzberg SL. 2009. TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
49
-
-
83555173562
-
Oncogenic RAS regulates BRIP1 expression to induce dissociation of BRCA1 from chromatin, inhibit DNA repair, and promote senescence
-
Tu Z, Aird KM, Bitler BG, Nicodemus JP, Beeharry N, Xia B, Yen TJ, Zhang R. 2011. Oncogenic RAS regulates BRIP1 expression to induce dissociation of BRCA1 from chromatin, inhibit DNA repair, and promote senescence. Dev Cell 21: 1077-1091.
-
(2011)
Dev Cell
, vol.21
, pp. 1077-1091
-
-
Tu, Z.1
Aird, K.M.2
Bitler, B.G.3
Nicodemus, J.P.4
Beeharry, N.5
Xia, B.6
Yen, T.J.7
Zhang, R.8
-
50
-
-
11244281646
-
RNA polymerases i and III, growth control and cancer
-
White RJ. 2005. RNA polymerases I and III, growth control and cancer. Nat Rev Mol Cell Biol 6: 69-78.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 69-78
-
-
White, R.J.1
-
51
-
-
79953699973
-
SeqMINER: An integrated ChIP-seq data interpretation platform
-
Ye T, Krebs AR, Choukrallah MA, Keime C, Plewniak F, Davidson I, Tora L. 2011. seqMINER: An integrated ChIP-seq data interpretation platform. Nucleic Acids Res 39: e35.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Ye, T.1
Krebs, A.R.2
Choukrallah, M.A.3
Keime, C.4
Plewniak, F.5
Davidson, I.6
Tora, L.7
-
52
-
-
63549129144
-
SUMOylation and De-SUMOylation: Wrestling with life's processes
-
Yeh ET. 2009. SUMOylation and De-SUMOylation: Wrestling with life's processes. J Biol Chem 284: 8223-8227.
-
(2009)
J Biol Chem
, vol.284
, pp. 8223-8227
-
-
Yeh, E.T.1
-
53
-
-
53849146020
-
Model-based analysis of ChIPSeq (MACS)
-
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, et al. 2008. Model-based analysis of ChIPSeq (MACS). Genome Biol 9: R137.
-
(2008)
Genome Biol
, vol.9
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
Nusbaum, C.7
Myers, R.M.8
Brown, M.9
Li, W.10
-
54
-
-
2442703973
-
Broad spectrum identification of cellular small ubiquitin-related modifier (SUMO) substrate proteins
-
Zhao Y, Kwon SW, Anselmo A, Kaur K, White MA. 2004. Broad spectrum identification of cellular small ubiquitin-related modifier (SUMO) substrate proteins. J Biol Chem 279: 20999-21002.
-
(2004)
J Biol Chem
, vol.279
, pp. 20999-21002
-
-
Zhao, Y.1
Kwon, S.W.2
Anselmo, A.3
Kaur, K.4
White, M.A.5
-
55
-
-
0343776952
-
Role of SUMO-1-modified PML in nuclear body formation
-
Zhong S, Muller S, Ronchetti S, Freemont PS, Dejean A, Pandolfi PP. 2000. Role of SUMO-1-modified PML in nuclear body formation. Blood 95: 2748-2752.
-
(2000)
Blood
, vol.95
, pp. 2748-2752
-
-
Zhong, S.1
Muller, S.2
Ronchetti, S.3
Freemont, P.S.4
Dejean, A.5
Pandolfi, P.P.6
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