Quantitative analysis of aberrant protein glycosylation in liver cancer plasma by AAL-enrichment and MRM mass spectrometry

Analyst

Volumn 138, Issue 21, 2013, Pages 6454-6462

  Ahn, Yeong Hee ^a   Shin, Park Min ^a   Kim, Yong Sam ^b   Oh, Na Ree ^a   Ji, Eun Sun ^a   Kim, Kwang Hoe ^a,d   Lee, Yeon Jung ^c   Kim, Sung Ho ^c   Yoo, Jong Shin ^a,d  

^a Korea Basic Science Institute (KBSI)   (South Korea)

^b Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^c Soonchunhyang University   (South Korea)

^d Chungnam National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER; LECTIN; LECTIN, ALEURIA AURANTIA; TUMOR MARKER;

ARTICLE; BLOOD; CHEMISTRY; GLYCOSYLATION; HUMAN; LIVER TUMOR; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; PLASMA;

BIOLOGICAL MARKERS; GLYCOSYLATION; HUMANS; LECTINS; LIVER NEOPLASMS; MASS SPECTROMETRY; PLASMA; TUMOR MARKERS, BIOLOGICAL;

EID: 84885005694     PISSN: 00032654     EISSN: 13645528     Source Type: Journal    
DOI: 10.1039/c3an01126g     Document Type: Article

References (28)

1. A. D. Taylor W. S. Hancock M. Hincapie N. Taniguchi S. M. Hanash Towards an integrated proteomic and glycomic approach to finding cancer biomarkers Genome Med. 2009 1 57
2. K. Moriwaki E. Miyoshi Fucosylation and gastrointestinal cancer World J. Hepatol. 2010 2 151 161
3. C. Ohyama M. Hosono K. Nitta M. Oh-eda K. Yoshikawa T. Habuchi Y. Arai M. Fukuda Carbohydrate structure and differential binding of prostate specific antigen to Maackia amurensis lectin between prostate cancer and benign prostate hypertrophy Glycobiology 2004 14 671 679
4. E. Miyoshi Y. Ito Y. Miyoshi Involvement of aberrant glycosylation in thyroid cancer J. Oncol. 2010 2010 816595
5. S. Barrabés L. Pagès-Pons C. M. Radcliffe G. Tabarés Glycosylation of serum ribonuclease 1 indicates a major endothelial origin and reveals an increase in core fucosylation in pancreatic cancer Glycobiology 2007 17 388 400
6. D. L. Meany Z. Zhang L. J. Sokoll H. Zhang D. W. Chan Glycoproteomics for prostate cancer detection: changes in serum PSA glycosylation patterns J. Proteome Res. 2009 8 613 619
7. V. V. Khien H. V. Mao T. T. Chinh P. T. Ha M. H. Bang B. V. Lac T. V. Hop N. A. Tuan L. V. Don K. Taketa S. Satomura Clinical evaluation of lentil lectin-reactive alpha-fetoprotein-L3 in histology-proven hepatocellular carcinoma Int. J. Biol. Markers 2001 16 105 111
8. M. A. Comunale M. Wang J. Hafner J. Krakover L. Rodemich B. Kopenhaver R. E. Long O. Junaidi A. M. Bisceglie T. M. Block A. S. Mehta Identification and development of fucosylated glycoproteins as biomarkers of primary hepatocellular carcinoma J. Proteome Res. 2009 8 595 602
9. Y. H. Ahn P. M. Shin N. R. Oh G. W. Park H. Kim J. S. Yoo A lectin-coupled, targeted proteomic mass spectrometry (MRM MS) platform for identification of multiple liver cancer biomarkers in human plasma J. Proteomics 2012 75 5507 5515
10. Y. Liu J. He C. Li R. Benitez S. Fu J. Marrero D. M. Lubman Identification and confirmation of biomarkers using an integrated platform for quantitative analysis of glycoproteins and their glycosylations J. Proteome Res. 2010 9 798 805
11. Y. H. Ahn J. Y. Lee J. Y. Lee Y. S. Kim J. H. Ko J. S. Yoo Quantitative analysis of an aberrant glycoform of TIMP1 from colon cancer serum by L-PHA-enrichment and SISCAPA with MRM mass spectrometry J. Proteome Res. 2009 8 4216 4224
12. Y. S. Kim O. L. Son J. Y. Lee S. H. Kim S. Oh Y. S. Lee C. H. Kim J. S. Yoo J. H. Lee E. Miyoshi N. Taniguchi S. M. Hanash H. S. Yoo J. H. Ko Lectin precipitation using phytohemagglutinin-L(4) coupled to avidin-agarose for serological biomarker discovery in colorectal cancer Proteomics 2008 8 3229 3235
13. Y. H. Ahn E. S. Ji P. M. Shin K. H. Kim Y. S. Kim J. H. Ko J. S. Yoo A multiplex lectin-channel monitoring method for human serum glycoproteins by quantitative mass spectrometry Analyst 2012 137 691 703
14. E. Boja R. Rivers C. Kinsinger M. Mesri T. Hiltke A. Rahbar H. Rodriguez Restructuring proteomics through verification Biomarkers Med. 2010 4 799 803
15. L. Anderson C. L. Hunter Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins Mol. Cell. Proteomics 2006 5 573 588
16. L. G. Luna T. L. Williams J. L. Pirkle J. R. Barr Ultra performance liquid chromatography isotope dilution tandem mass spectrometry for the absolute quantification of proteins and peptides Anal. Chem. 2008 80 2688 2693
17. Y. H. Ahn P. M. Shin E. S. Ji H. Kim J. S. Yoo A lectin-coupled, multiple reaction monitoring-based quantitative analysis of human plasma glycoproteins by mass spectrometry Anal. Bioanal. Chem. 2012 402 2101 2112
18. Y. H. Ahn Y. S. Kim E. S. Ji J. Y. Lee J. A. Jung J. H. Ko J. S. Yoo Comparative quantitation of aberrant glycoforms by lectin-based glycoprotein enrichment coupled with multiple-reaction monitoring mass spectrometry Anal. Chem. 2010 82 4441 4447
19. H. Zhang X. J. Li D. B. Martin R. Aebersold Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry Nat. Biotechnol. 2003 21 660 666
20. T. Liu W. J. Qian M. A. Gritsenko D. G. Camp M. E. Monroe R. J. Moore R. D. Smith Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry J. Proteome Res. 2005 4 2070 2080
21. X. Zeng B. L. Hood M. Sun T. P. Conrads R. S. Day J. L. Weissfeld J. M. Siegfried W. L. Bigbee Lung cancer serum biomarker discovery using glycoprotein capture and liquid chromatography mass spectrometry J. Proteome Res. 2010 9 6440 6449
22. K. Sparbier S. Koch I. Kessler T. Wenzel M. J. Kostrzewa Selective isolation of glycoproteins and glycopeptides for MALDI-TOF MS detection supported by magnetic particles J. Biomol. Tech. 2005 16 407 413
23. J. H. Lee Y. Kim M. Y. Ha E. K. Lee J. Choo Immobilization of aminophenylboronic acid on magnetic beads for the direct determination of glycoproteins by matrix assisted laser desorption ionization mass spectrometry J. Am. Soc. Mass Spectrom. 2005 16 1456 1460
24. M. Chen Y. Lu Q. Ma L. Guo Y. Q. Feng Boronate affinity monolith for highly selective enrichment of glycopeptides and glycoproteins Analyst 2009 134 2158 2164
25. Z. Dai J. Zhou S. J. Qiu Y. K. Liu J. Fan Lectin-based glycoproteomics to explore and analyze hepatocellular carcinoma-related glycoprotein markers Electrophoresis 2009 30 2957 2966
26. Y. Zhao L. Yu Z. Guo X. Li X. Liang Reversed-phase depletion coupled with hydrophilic affinity enrichment for the selective isolation of N-linked glycopeptides by using Click OEG-CD matrix Anal. Bioanal. Chem. 2011 399 3359 3365
27. H. Wan J. Yan L. Yu Q. Sheng X. Zhang X. Xue X. Li X. Liang Zirconia layer coated mesoporous silica microspheres as HILIC SPE materials for selective glycopeptide enrichment Analyst 2011 136 4422 4430
28. M. P. Lam S. O. Siu E. Lau X. Mao H. Z. Sun P. C. Chiu W. S. Yeung D. M. Cox I. K. Chu Online coupling of reverse-phase and hydrophilic interaction liquid chromatography for protein and glycoprotein characterization Anal. Bioanal. Chem. 2010 398 791 804