메뉴 건너뛰기




Volumn 13, Issue 6, 2013, Pages 647-655

Impact of low temperature on splicing of atypical group II introns in wheat mitochondria

Author keywords

Cold; Evolution; Intron; Mitochondria; Ribozyme; Splicing

Indexed keywords

MESSENGER RNA; MESSENGER RNA PRECURSOR; MITOCHONDRIAL RNA; PLANT RNA;

EID: 84884966202     PISSN: 15677249     EISSN: 18728278     Source Type: Journal    
DOI: 10.1016/j.mito.2013.09.001     Document Type: Article
Times cited : (15)

References (44)
  • 1
    • 51449098583 scopus 로고    scopus 로고
    • Heat stress enhances the accumulation of polyadenylated mitochondrial transcripts in Arabidopsis thaliana
    • Adamo A., Pinney J.W., Kunova A., Westhead D.R., Meyer P. Heat stress enhances the accumulation of polyadenylated mitochondrial transcripts in Arabidopsis thaliana. PLoS One 2008, 3:e2889.
    • (2008) PLoS One , vol.3
    • Adamo, A.1    Pinney, J.W.2    Kunova, A.3    Westhead, D.R.4    Meyer, P.5
  • 3
    • 37249020936 scopus 로고    scopus 로고
    • Cis- and trans-splicing of group II introns in plant mitochondria
    • Bonen L. Cis- and trans-splicing of group II introns in plant mitochondria. Mitochondrion 2008, 8:26-34.
    • (2008) Mitochondrion , vol.8 , pp. 26-34
    • Bonen, L.1
  • 4
    • 0035368207 scopus 로고    scopus 로고
    • The ins and outs of group II introns
    • Bonen L., Vogel J. The ins and outs of group II introns. Trends Genet. 2001, 17:322-331.
    • (2001) Trends Genet. , vol.17 , pp. 322-331
    • Bonen, L.1    Vogel, J.2
  • 5
    • 0001599310 scopus 로고
    • The wheat cytochrome oxidase subunit II gene has an intron insert and three radical amino acid changes relative to maize
    • Bonen L., Boer P.H., Gray M.W. The wheat cytochrome oxidase subunit II gene has an intron insert and three radical amino acid changes relative to maize. EMBO J. 1984, 3:2531-2536.
    • (1984) EMBO J. , vol.3 , pp. 2531-2536
    • Bonen, L.1    Boer, P.H.2    Gray, M.W.3
  • 6
    • 0030736590 scopus 로고    scopus 로고
    • RNA editing status of nad7 intron domains in wheat mitochondria
    • Carrillo C., Bonen L. RNA editing status of nad7 intron domains in wheat mitochondria. Nucleic Acids Res. 1997, 25:403-409.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 403-409
    • Carrillo, C.1    Bonen, L.2
  • 7
    • 0035145548 scopus 로고    scopus 로고
    • Variation in sequence and RNA editing within core domains of mitochondrial group II introns among plants
    • Carrillo C., Chapdelaine Y., Bonen L. Variation in sequence and RNA editing within core domains of mitochondrial group II introns among plants. Mol. Gen. Genet. 2001, 264:595-603.
    • (2001) Mol. Gen. Genet. , vol.264 , pp. 595-603
    • Carrillo, C.1    Chapdelaine, Y.2    Bonen, L.3
  • 9
    • 84867651968 scopus 로고    scopus 로고
    • Mapping of wheat mitochondrial mRNA termini and comparison with breakpoints in DNA homology among plants
    • Choi B., Acero M.M., Bonen L. Mapping of wheat mitochondrial mRNA termini and comparison with breakpoints in DNA homology among plants. Plant Mol. Biol. 2012, 80:539-552.
    • (2012) Plant Mol. Biol. , vol.80 , pp. 539-552
    • Choi, B.1    Acero, M.M.2    Bonen, L.3
  • 10
    • 0031671299 scopus 로고    scopus 로고
    • More than one way to splice an RNA: branching without a bulge and splicing without branching in group II introns
    • Chu V.T., Liu Q., Podar M., Perlman P.S., Pyle A.M. More than one way to splice an RNA: branching without a bulge and splicing without branching in group II introns. RNA 1998, 4:1186-1202.
    • (1998) RNA , vol.4 , pp. 1186-1202
    • Chu, V.T.1    Liu, Q.2    Podar, M.3    Perlman, P.S.4    Pyle, A.M.5
  • 11
    • 0035803594 scopus 로고    scopus 로고
    • Control of branch-site choice by a group II intron
    • Chu V.T., Adamidi C., Liu Q., Perlman P.S., Pyle A.M. Control of branch-site choice by a group II intron. EMBO J. 2001, 20:6866-6876.
    • (2001) EMBO J. , vol.20 , pp. 6866-6876
    • Chu, V.T.1    Adamidi, C.2    Liu, Q.3    Perlman, P.S.4    Pyle, A.M.5
  • 12
    • 77955154599 scopus 로고    scopus 로고
    • Nuclearly encoded splicing factors implicated in RNA splicing in higher plant organelles
    • de Longevialle A.F., Small I.D., Lurin C. Nuclearly encoded splicing factors implicated in RNA splicing in higher plant organelles. Mol. Plant 2010, 3:691-705.
    • (2010) Mol. Plant , vol.3 , pp. 691-705
    • de Longevialle, A.F.1    Small, I.D.2    Lurin, C.3
  • 13
    • 3042698703 scopus 로고    scopus 로고
    • Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications
    • Dombrovska O., Qiu Y.L. Distribution of introns in the mitochondrial gene nad1 in land plants: phylogenetic and molecular evolutionary implications. Mol. Phylogenet. Evol. 2004, 32:246-263.
    • (2004) Mol. Phylogenet. Evol. , vol.32 , pp. 246-263
    • Dombrovska, O.1    Qiu, Y.L.2
  • 14
    • 77950358312 scopus 로고    scopus 로고
    • Extensive mis-splicing of a bi-partite plant mitochondrial group II intron
    • Elina H., Brown G.G. Extensive mis-splicing of a bi-partite plant mitochondrial group II intron. Nucleic Acids Res. 2010, 38:996-1008.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 996-1008
    • Elina, H.1    Brown, G.G.2
  • 15
    • 0033179937 scopus 로고    scopus 로고
    • The mat-r open reading frame is transcribed from a non-canonical promoter and contains an internal promoter to co-transcribe exons nad1e and nad5III in wheat mitochondria
    • Farré J.C., Araya A. The mat-r open reading frame is transcribed from a non-canonical promoter and contains an internal promoter to co-transcribe exons nad1e and nad5III in wheat mitochondria. Plant Mol. Biol. 1999, 40:959-967.
    • (1999) Plant Mol. Biol. , vol.40 , pp. 959-967
    • Farré, J.C.1    Araya, A.2
  • 16
    • 0036007977 scopus 로고    scopus 로고
    • RNA splicing in higher plant mitochondria: determination of functional elements in group II intron from a chimeric cox II gene in electroporated wheat mitochondria
    • Farré J.C., Araya A. RNA splicing in higher plant mitochondria: determination of functional elements in group II intron from a chimeric cox II gene in electroporated wheat mitochondria. Plant J. 2002, 29:203-213.
    • (2002) Plant J. , vol.29 , pp. 203-213
    • Farré, J.C.1    Araya, A.2
  • 17
    • 84871445428 scopus 로고    scopus 로고
    • RNA editing in mitochondrial trans-introns is required for splicing
    • Farré J.C., Aknin C., Araya A., Castandet B. RNA editing in mitochondrial trans-introns is required for splicing. PLoS One 2012, 7:e52644.
    • (2012) PLoS One , vol.7
    • Farré, J.C.1    Aknin, C.2    Araya, A.3    Castandet, B.4
  • 18
    • 84859161527 scopus 로고    scopus 로고
    • A PORR domain protein required for rpl2 and ccmF(C) intron splicing and for the biogenesis of c-type cytochromes in Arabidopsis mitochondria
    • Francs-Small C.C., Kroeger T., Zmudjak M., Ostersetzer-Biran O., Rahimi N., Small I., Barkan A. A PORR domain protein required for rpl2 and ccmF(C) intron splicing and for the biogenesis of c-type cytochromes in Arabidopsis mitochondria. Plant J. 2012, 69:996-1005.
    • (2012) Plant J. , vol.69 , pp. 996-1005
    • Francs-Small, C.C.1    Kroeger, T.2    Zmudjak, M.3    Ostersetzer-Biran, O.4    Rahimi, N.5    Small, I.6    Barkan, A.7
  • 19
    • 84864432798 scopus 로고    scopus 로고
    • NMAT1, a nuclear-encoded maturase involved in the trans-splicing of nad1 intron 1, is essential for mitochondrial complex I assembly and function
    • Keren I., Tal L., des Francs-Small C.C., Araújo W.L., Shevtsov S., Shava F., Fernie A.R., Small I., Ostersetzer-Biran O. nMAT1, a nuclear-encoded maturase involved in the trans-splicing of nad1 intron 1, is essential for mitochondrial complex I assembly and function. Plant J. 2012, 71:413-426.
    • (2012) Plant J. , vol.71 , pp. 413-426
    • Keren, I.1    Tal, L.2    des Francs-Small, C.C.3    Araújo, W.L.4    Shevtsov, S.5    Shava, F.6    Fernie, A.R.7    Small, I.8    Ostersetzer-Biran, O.9
  • 20
    • 77449107130 scopus 로고    scopus 로고
    • The DEAD-box protein PMH2 is required for efficient group II intron splicing in mitochondria of Arabidopsis thaliana
    • Köhler D., Schmidt-Gattung S., Binder S. The DEAD-box protein PMH2 is required for efficient group II intron splicing in mitochondria of Arabidopsis thaliana. Plant Mol. Biol. 2010, 72:459-467.
    • (2010) Plant Mol. Biol. , vol.72 , pp. 459-467
    • Köhler, D.1    Schmidt-Gattung, S.2    Binder, S.3
  • 23
    • 0035169044 scopus 로고    scopus 로고
    • Low Temperature affects the processing pattern and RNA editing status of the mitochondrial cox2 transcripts in wheat
    • Kurihara-Yonemoto S., Handa H. Low Temperature affects the processing pattern and RNA editing status of the mitochondrial cox2 transcripts in wheat. Curr. Genet. 2001, 40:203-208.
    • (2001) Curr. Genet. , vol.40 , pp. 203-208
    • Kurihara-Yonemoto, S.1    Handa, H.2
  • 24
    • 84886803599 scopus 로고    scopus 로고
    • Increased accumulation of intron-containing transcripts in rice mitochondria caused by low temperature: is cold-sensitive RNA editing implicated?
    • Kurihara-Yonemoto S., Kubo T. Increased accumulation of intron-containing transcripts in rice mitochondria caused by low temperature: is cold-sensitive RNA editing implicated?. Curr. Genet. 2010, 40:203-208.
    • (2010) Curr. Genet. , vol.40 , pp. 203-208
    • Kurihara-Yonemoto, S.1    Kubo, T.2
  • 26
    • 69449096380 scopus 로고    scopus 로고
    • Polyadenylation-assisted RNA degradation processes in plants
    • Lange H., Sement F.M., Canaday J., Gagliardi D. Polyadenylation-assisted RNA degradation processes in plants. Trends Plant Sci. 2009, 14:497-504.
    • (2009) Trends Plant Sci. , vol.14 , pp. 497-504
    • Lange, H.1    Sement, F.M.2    Canaday, J.3    Gagliardi, D.4
  • 27
    • 79961030006 scopus 로고    scopus 로고
    • Linking the branchpoint helix to a newly found receptor allows lariat formation by a group II intron
    • Li C.F., Costa M., Michel F. Linking the branchpoint helix to a newly found receptor allows lariat formation by a group II intron. EMBO J. 2011, 30:3040-3051.
    • (2011) EMBO J. , vol.30 , pp. 3040-3051
    • Li, C.F.1    Costa, M.2    Michel, F.3
  • 28
    • 79959288175 scopus 로고    scopus 로고
    • Recurrent insertion of 5'-terminal nucleotides and loss of the branchpoint motif in lineages of group II introns inserted in mitochondrial preribosomal RNAs
    • Li C., Costa M., Bassi G., Lai Y., Michel F. Recurrent insertion of 5'-terminal nucleotides and loss of the branchpoint motif in lineages of group II introns inserted in mitochondrial preribosomal RNAs. RNA 2011, 17:1321-1335.
    • (2011) RNA , vol.17 , pp. 1321-1335
    • Li, C.1    Costa, M.2    Bassi, G.3    Lai, Y.4    Michel, F.5
  • 29
    • 33744817387 scopus 로고    scopus 로고
    • Multiple physical forms of excised group II intron RNAs in wheat mitochondria
    • Li-Pook-Than J., Bonen L. Multiple physical forms of excised group II intron RNAs in wheat mitochondria. Nucleic Acids Res. 2006, 34:2782-2790.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 2782-2790
    • Li-Pook-Than, J.1    Bonen, L.2
  • 30
    • 11244316583 scopus 로고    scopus 로고
    • Variation in mitochondrial transcript profiles of protein-coding genes during early germination and seedling development in wheat
    • Li-Pook-Than J., Carrillo C., Bonen L. Variation in mitochondrial transcript profiles of protein-coding genes during early germination and seedling development in wheat. Curr. Genet. 2004, 46:374-380.
    • (2004) Curr. Genet. , vol.46 , pp. 374-380
    • Li-Pook-Than, J.1    Carrillo, C.2    Bonen, L.3
  • 31
    • 0028329182 scopus 로고
    • Differential RNA editing in closely related introns in Oenothera mitochondria
    • Lippok B., Brennicke A., Wissinger B. Differential RNA editing in closely related introns in Oenothera mitochondria. Mol. Gen. Genet. 1994, 243:39-46.
    • (1994) Mol. Gen. Genet. , vol.243 , pp. 39-46
    • Lippok, B.1    Brennicke, A.2    Wissinger, B.3
  • 32
    • 77956080636 scopus 로고    scopus 로고
    • ABA overly-sensitive 5 (ABO5), encoding a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3, is involved in the abscisic acid response in Arabidopsis
    • Liu Y., He J., Chen Z., Ren X., Hong X., Gong Z. ABA overly-sensitive 5 (ABO5), encoding a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3, is involved in the abscisic acid response in Arabidopsis. Plant J. 2010, 63:749-765.
    • (2010) Plant J. , vol.63 , pp. 749-765
    • Liu, Y.1    He, J.2    Chen, Z.3    Ren, X.4    Hong, X.5    Gong, Z.6
  • 34
    • 84868035651 scopus 로고    scopus 로고
    • Visualizing group II intron catalysis through stages of splicing
    • Marcia M., Pyle A.M. Visualizing group II intron catalysis through stages of splicing. Cell 2012, 153:497-507.
    • (2012) Cell , vol.153 , pp. 497-507
    • Marcia, M.1    Pyle, A.M.2
  • 35
    • 33749402621 scopus 로고    scopus 로고
    • Excision of the Sinorhizobium meliloti group II intron RmInt1 as circles in vivo
    • Molina-Sanchez M.D., Martinez-Abarca F., Toro N. Excision of the Sinorhizobium meliloti group II intron RmInt1 as circles in vivo. J. Biol. Chem. 2006, 281:28737-28744.
    • (2006) J. Biol. Chem. , vol.281 , pp. 28737-28744
    • Molina-Sanchez, M.D.1    Martinez-Abarca, F.2    Toro, N.3
  • 36
    • 79958716075 scopus 로고    scopus 로고
    • Relevance of the branch point adenosine, coordination loop, and 3' exon binding site for in vivo excision of the Sinorhizobium meliloti group II intron RmInt1
    • Molina-Sánchez M.D., Barrientos-Durán A., Toro N. Relevance of the branch point adenosine, coordination loop, and 3' exon binding site for in vivo excision of the Sinorhizobium meliloti group II intron RmInt1. J. Biol. Chem. 2011, 286:21154-21163.
    • (2011) J. Biol. Chem. , vol.286 , pp. 21154-21163
    • Molina-Sánchez, M.D.1    Barrientos-Durán, A.2    Toro, N.3
  • 39
    • 85011941669 scopus 로고    scopus 로고
    • Group I introns: moving in new directions
    • Nielsen H., Johansen S.D. Group I introns: moving in new directions. RNA Biol. 2009, 6:375-383.
    • (2009) RNA Biol. , vol.6 , pp. 375-383
    • Nielsen, H.1    Johansen, S.D.2
  • 40
    • 0344442429 scopus 로고    scopus 로고
    • The ability to form full-length intron RNA circles is a general property of nuclear group I introns
    • Nielsen H., Fiskaa T., Birgisdottir A.B., Haugen P., Einvik C., Johansen S. The ability to form full-length intron RNA circles is a general property of nuclear group I introns. RNA 2003, 9:1464-1475.
    • (2003) RNA , vol.9 , pp. 1464-1475
    • Nielsen, H.1    Fiskaa, T.2    Birgisdottir, A.B.3    Haugen, P.4    Einvik, C.5    Johansen, S.6
  • 41
    • 77952831096 scopus 로고    scopus 로고
    • The tertiary structure of group II introns: implications for biological function and evolution
    • Pyle A.M. The tertiary structure of group II introns: implications for biological function and evolution. Crit. Rev. Biochem. Mol. Biol. 2010, 45:215-232.
    • (2010) Crit. Rev. Biochem. Mol. Biol. , vol.45 , pp. 215-232
    • Pyle, A.M.1
  • 42
    • 33845895973 scopus 로고    scopus 로고
    • Self-splicing of a group IIC intron: 5' exon recognition and alternative 5' splicing events implicate the stem-loop motif of a transcriptional terminator
    • Toor N., Robart A.R., Christianson J., Zimmerly S. Self-splicing of a group IIC intron: 5' exon recognition and alternative 5' splicing events implicate the stem-loop motif of a transcriptional terminator. Nucleic Acids Res. 2006, 34:6461-6471.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 6461-6471
    • Toor, N.1    Robart, A.R.2    Christianson, J.3    Zimmerly, S.4
  • 43
    • 0037099679 scopus 로고    scopus 로고
    • Lariat formation and a hydrolytic pathway in plant chloroplast group II intron splicing
    • Vogel J., Börner T. Lariat formation and a hydrolytic pathway in plant chloroplast group II intron splicing. EMBO J. 2002, 21:3194-3802.
    • (2002) EMBO J. , vol.21 , pp. 3194-3802
    • Vogel, J.1    Börner, T.2
  • 44
    • 84879684328 scopus 로고    scopus 로고
    • MCSF1, a nucleus-encoded CRM protein required for the processing of many mitochondrial introns, is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis
    • Zmudjak M., Colas des Francs-Small C., Keren I., Shaya F., Belausov E., Small I., Ostersetzer-Biran O. mCSF1, a nucleus-encoded CRM protein required for the processing of many mitochondrial introns, is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis. New Phytol. 2013, 199:379-394.
    • (2013) New Phytol. , vol.199 , pp. 379-394
    • Zmudjak, M.1    Colas des Francs-Small, C.2    Keren, I.3    Shaya, F.4    Belausov, E.5    Small, I.6    Ostersetzer-Biran, O.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.