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Volumn 3, Issue 8, 2008, Pages

Heat stress enhances the accumulation of polyadenylated mitochondrial transcripts in Arabidopsis thaliana

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; GENE TRANSFER; GENETIC POLYMORPHISM; GENETIC TRANSCRIPTION; HEAT STRESS; HEAT TREATMENT; MICROARRAY ANALYSIS; MITOCHONDRIAL GENETICS; NONHUMAN; PLANT GENETICS; PLANT STRESS; POLYADENYLATION; RNA PROBE; STEADY STATE; DNA MICROARRAY; GENETICS; HEAT INJURY; MITOCHONDRION; PLANT GENOME; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

EID: 51449098583     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0002889     Document Type: Article
Times cited : (20)

References (28)
  • 1
    • 0024323801 scopus 로고
    • Poly(A), poly(A) binding protein and the regulation of mRNA stability
    • Bernstein P, Ross J (1989) Poly(A), poly(A) binding protein and the regulation of mRNA stability. Trends in Biochemical Sciences 14: 373.
    • (1989) Trends in Biochemical Sciences , vol.14 , pp. 373
    • Bernstein, P.1    Ross, J.2
  • 2
    • 0033788228 scopus 로고    scopus 로고
    • The ends of the affair: Capping and polyadenylation
    • Shatkin AJ, Manley JL (2000) The ends of the affair: Capping and polyadenylation. Nat Struct Mol Biol 7: 838.
    • (2000) Nat Struct Mol Biol , vol.7 , pp. 838
    • Shatkin, A.J.1    Manley, J.L.2
  • 3
    • 0032916509 scopus 로고    scopus 로고
    • mRNA degradation: A tale of poly(A) and multiprotein machines
    • Carpousis AJ, Vanzo NF, Raynal LC (1999) mRNA degradation: a tale of poly(A) and multiprotein machines. Trends in Genetics 15: 24.
    • (1999) Trends in Genetics , vol.15 , pp. 24
    • Carpousis, A.J.1    Vanzo, N.F.2    Raynal, L.C.3
  • 4
    • 0030468099 scopus 로고    scopus 로고
    • Polyadenylation accelerates degradation of chloroplast mRNA
    • Kudla J, Hayes R, Gruissem W (1996) Polyadenylation accelerates degradation of chloroplast mRNA. EMBO J 15: 7137-7146.
    • (1996) EMBO J , vol.15 , pp. 7137-7146
    • Kudla, J.1    Hayes, R.2    Gruissem, W.3
  • 5
    • 0033168679 scopus 로고    scopus 로고
    • Polyadenylation accelerates the degradation of the mitochondrial mRNA associated with cytoplasmic male sterility in sunflower
    • Gagliardi D, Leaver JCJ (1999) Polyadenylation accelerates the degradation of the mitochondrial mRNA associated with cytoplasmic male sterility in sunflower. EMBO J 18: 3757-3766.
    • (1999) EMBO J , vol.18 , pp. 3757-3766
    • Gagliardi, D.1    Leaver, J.C.J.2
  • 6
    • 0345580792 scopus 로고    scopus 로고
    • Polyadenylation Occurs at Multiple Sites in Maize Mitochondrial cox2 mRNA and Is Independent of Editing Status
    • Lupold DS, Caoile AGFS, Stern DB (1999) Polyadenylation Occurs at Multiple Sites in Maize Mitochondrial cox2 mRNA and Is Independent of Editing Status. Plant Cell 11: 1565-1578.
    • (1999) Plant Cell , vol.11 , pp. 1565-1578
    • Lupold, D.S.1    Caoile, A.G.F.S.2    Stern, D.B.3
  • 7
    • 33645233480 scopus 로고    scopus 로고
    • Relaxed Transcription in Arabidopsis Mitochondria Is Counterbalanced by RNA Stability Control Mediated by Polyadenylation and Polynucleotide Phosphorylase
    • Holec S, Lange H, Kuhn K, Alioua M, Borner T, et al. (2006) Relaxed Transcription in Arabidopsis Mitochondria Is Counterbalanced by RNA Stability Control Mediated by Polyadenylation and Polynucleotide Phosphorylase. Mol Cell Biol 26: 2869-2876.
    • (2006) Mol Cell Biol , vol.26 , pp. 2869-2876
    • Holec, S.1    Lange, H.2    Kuhn, K.3    Alioua, M.4    Borner, T.5
  • 8
    • 21244454028 scopus 로고    scopus 로고
    • Human Mitochondrial mRNAs Are Stabilized with Polyadenylation Regulated by Mitochondria-specific Poly(A) Polymerase and Polynucleotide Phosphorylase
    • Nagaike T, Suzuki T, Katoh T, Ueda T (2005) Human Mitochondrial mRNAs Are Stabilized with Polyadenylation Regulated by Mitochondria-specific Poly(A) Polymerase and Polynucleotide Phosphorylase. J Biol Chem 280: 19721-19727.
    • (2005) J Biol Chem , vol.280 , pp. 19721-19727
    • Nagaike, T.1    Suzuki, T.2    Katoh, T.3    Ueda, T.4
  • 9
    • 20444368818 scopus 로고    scopus 로고
    • RNA Degradation by the Exosome Is Promoted by a Nuclear Polyadenylation Complex
    • LaCava J, Houseley J, Saveanu C, Petfalski E, Thompson E, et al. (2005) RNA Degradation by the Exosome Is Promoted by a Nuclear Polyadenylation Complex. Cell 121: 713.
    • (2005) Cell , vol.121 , pp. 713
    • LaCava, J.1    Houseley, J.2    Saveanu, C.3    Petfalski, E.4    Thompson, E.5
  • 10
    • 0035942234 scopus 로고    scopus 로고
    • Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: Implication of potential sequencing errors caused by large-unit repeats
    • Stupar RM, Lilly JW, Town CD, Cheng Z, Kaul S, et al. (2001) Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: Implication of potential sequencing errors caused by large-unit repeats. PNAS 98: 5099-5103.
    • (2001) PNAS , vol.98 , pp. 5099-5103
    • Stupar, R.M.1    Lilly, J.W.2    Town, C.D.3    Cheng, Z.4    Kaul, S.5
  • 11
    • 0033592907 scopus 로고    scopus 로고
    • RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs
    • Giege P, Brennicke A (1999) RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs. PNAS 96: 15324-15329.
    • (1999) PNAS , vol.96 , pp. 15324-15329
    • Giege, P.1    Brennicke, A.2
  • 12
    • 3242691607 scopus 로고    scopus 로고
    • AtXRN4 Degrades mRNA in Arabidopsis and Its Substrates Include Selected miRNA Targets
    • Souret FF, Kastenmayer JP, Green PJ (2004) AtXRN4 Degrades mRNA in Arabidopsis and Its Substrates Include Selected miRNA Targets. Molecular Cell 15: 173.
    • (2004) Molecular Cell , vol.15 , pp. 173
    • Souret, F.F.1    Kastenmayer, J.P.2    Green, P.J.3
  • 13
    • 0344719444 scopus 로고    scopus 로고
    • Evolution of mitochondrial gene content: Gene loss and transfer to the nucleus
    • Adams KL, Palmer JD (2003) Evolution of mitochondrial gene content: gene loss and transfer to the nucleus. Plant Molecular Evolution 29: 380-395.
    • (2003) Plant Molecular Evolution , vol.29 , pp. 380-395
    • Adams, K.L.1    Palmer, J.D.2
  • 14
    • 0034917612 scopus 로고    scopus 로고
    • Multiple Losses and Transfers to the Nucleus of Two Mitochondrial Succinate Dehydrogenase Genes During Angiosperm Evolution
    • Adams KL, Rosenblueth M, Qiu Y-L, Palmer JD (2001) Multiple Losses and Transfers to the Nucleus of Two Mitochondrial Succinate Dehydrogenase Genes During Angiosperm Evolution. Genetics 158: 1289-1300.
    • (2001) Genetics , vol.158 , pp. 1289-1300
    • Adams, K.L.1    Rosenblueth, M.2    Qiu, Y.-L.3    Palmer, J.D.4
  • 15
    • 0034730503 scopus 로고    scopus 로고
    • Unusual Location of a Mitochondrial Gene. Subunit III of cytochrome c oxidase is encoded in the nucleus of chlamydomonad algae
    • Perez-Martinez X, Vazquez-Acevedo M, Tolkunova E, Funes S, Claros MG, et al. (2000) Unusual Location of a Mitochondrial Gene. Subunit III of cytochrome c oxidase is encoded in the nucleus of chlamydomonad algae. J Biol Chem 275: 30144-30152.
    • (2000) J Biol Chem , vol.275 , pp. 30144-30152
    • Perez-Martinez, X.1    Vazquez-Acevedo, M.2    Tolkunova, E.3    Funes, S.4    Claros, M.G.5
  • 16
    • 27244461126 scopus 로고    scopus 로고
    • Mutational Decay and Age of Chloroplast and Mitochondrial Genomes Transferred Recently to Angiosperm Nuclear Chromosomes
    • Huang CY, Grunheit N, Ahmadinejad N, Timmis JN, Martin W (2005) Mutational Decay and Age of Chloroplast and Mitochondrial Genomes Transferred Recently to Angiosperm Nuclear Chromosomes. Plant Physiol 138: 1723-1733.
    • (2005) Plant Physiol , vol.138 , pp. 1723-1733
    • Huang, C.Y.1    Grunheit, N.2    Ahmadinejad, N.3    Timmis, J.N.4    Martin, W.5
  • 18
    • 0015993236 scopus 로고
    • Post-transcriptional addition of polyadenylic acid to mitochondrial RNA by a cordycepin-insensitive process
    • Hirsch M, Penman S (1974) Post-transcriptional addition of polyadenylic acid to mitochondrial RNA by a cordycepin-insensitive process. Journal of Molecular Biology 83: 131.
    • (1974) Journal of Molecular Biology , vol.83 , pp. 131
    • Hirsch, M.1    Penman, S.2
  • 19
    • 38049039268 scopus 로고    scopus 로고
    • Thomadaki HCMTAS (2008) The effect of the polyadenylation inhibitor cordycepin on human Molt-4 and Daudi leukaemia and lymphoma cell lines. Cancer Chemother Pharmacol 61: 703-711.
    • Thomadaki HCMTAS (2008) The effect of the polyadenylation inhibitor cordycepin on human Molt-4 and Daudi leukaemia and lymphoma cell lines. Cancer Chemother Pharmacol 61: 703-711.
  • 20
    • 33644840915 scopus 로고    scopus 로고
    • Analysis of the cDNAs of Hypothetical Genes on Arabidopsis Chromosome 2 Reveals Numerous Transcript Variants
    • Xiao Y-L, Smith SR, Ishmael N, Redman JC, Kumar N, et al. (2005) Analysis of the cDNAs of Hypothetical Genes on Arabidopsis Chromosome 2 Reveals Numerous Transcript Variants. Plant Physiol 139: 1323-1337.
    • (2005) Plant Physiol , vol.139 , pp. 1323-1337
    • Xiao, Y.-L.1    Smith, S.R.2    Ishmael, N.3    Redman, J.C.4    Kumar, N.5
  • 21
    • 33646844440 scopus 로고    scopus 로고
    • The Arabidopsis co-expression tool (act): A WWW-based tool and database for microarray-based gene expression analysis
    • Jen C-H, Manfield IW, Michalopoulos I, Pinney JW, Willats WGT, et al. (2006) The Arabidopsis co-expression tool (act): a WWW-based tool and database for microarray-based gene expression analysis. The Plant Journal 46: 336-348.
    • (2006) The Plant Journal , vol.46 , pp. 336-348
    • Jen, C.-H.1    Manfield, I.W.2    Michalopoulos, I.3    Pinney, J.W.4    Willats, W.G.T.5
  • 22
    • 33747814803 scopus 로고    scopus 로고
    • Arabidopsis Co-expression Tool (ACT): Web server tools for microarray-based gene expression analysis
    • Manfield IW, Jen C-H, Pinney JW, Michalopoulos I, Bradford JR, et al. (2006) Arabidopsis Co-expression Tool (ACT): Web server tools for microarray-based gene expression analysis. Nucleic Acids Res 34: W504-W509.
    • (2006) Nucleic Acids Res , vol.34
    • Manfield, I.W.1    Jen, C.-H.2    Pinney, J.W.3    Michalopoulos, I.4    Bradford, J.R.5
  • 24
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
    • Article
    • Smyth GK (2004) Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Statistical Applications in Genetics and Molecular Biology 3: Article 3.
    • (2004) Statistical Applications in Genetics and Molecular Biology , vol.3 , pp. 3
    • Smyth, G.K.1
  • 25
    • 0042768158 scopus 로고    scopus 로고
    • Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
    • Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen H, et al. (2003) Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana. Science 301: 653-657.
    • (2003) Science , vol.301 , pp. 653-657
    • Alonso, J.M.1    Stepanova, A.N.2    Leisse, T.J.3    Kim, C.J.4    Chen, H.5
  • 26
    • 0034524685 scopus 로고    scopus 로고
    • Seed and Molecular Resources for Arabidopsis
    • Scholl RL, May ST, Ware DH (2000) Seed and Molecular Resources for Arabidopsis. Plant Physiol 124: 1477-1480.
    • (2000) Plant Physiol , vol.124 , pp. 1477-1480
    • Scholl, R.L.1    May, S.T.2    Ware, D.H.3
  • 27
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2-[Delta][Delta]CT Method
    • Livak KJ, Schmittgen TD (2001) Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2-[Delta][Delta]CT Method. Methods 25: 402.
    • (2001) Methods , vol.25 , pp. 402
    • Livak, K.J.1    Schmittgen, T.D.2
  • 28
    • 34547128656 scopus 로고    scopus 로고
    • Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: T-elements contribute to 5′ and 3′ end formation
    • Forner J, Weber B, Thuss S, Wildum S, Binder S (2007) Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5′ and 3′ end formation. Nucl Acids Res 35: 3676-3692.
    • (2007) Nucl Acids Res , vol.35 , pp. 3676-3692
    • Forner, J.1    Weber, B.2    Thuss, S.3    Wildum, S.4    Binder, S.5


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