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Volumn 18, Issue 1, 2013, Pages

Screening of key genes in gastric cancer with DNA microarray analysis

Author keywords

Differentially expressed gene; Functional enrichment analysis; Gastric cancer; Interaction network; Pathway analysis

Indexed keywords

COHESIN; FATTY ACID BINDING PROTEIN 4; NIMA RELATED KINASE 2 PROTEIN; OSTEOPONTIN; PHOSPHOTRANSFERASE; RAD21 PROTEIN; THROMBOSPONDIN 1; UNCLASSIFIED DRUG; FABP4 PROTEIN, HUMAN; FATTY ACID BINDING PROTEIN; SPP1 PROTEIN, HUMAN;

EID: 84884953640     PISSN: 09492321     EISSN: 2047783X     Source Type: Journal    
DOI: 10.1186/2047-783X-18-37     Document Type: Article
Times cited : (14)

References (45)
  • 1
    • 78649389947 scopus 로고    scopus 로고
    • Gastric cancer: Epidemiology and risk factors
    • 10.1159/000320277 21088409
    • Gastric cancer: epidemiology and risk factors. Krejs GJ, Dig Dis 2010 28 600 603 10.1159/000320277 21088409
    • (2010) Dig Dis , vol.28 , pp. 600-603
    • Krejs, G.J.1
  • 3
    • 84887319355 scopus 로고    scopus 로고
    • Molecular targeted therapy
    • Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA Allgayer H, Rehder H, Fulda S doi:10.1002/9783527627523.ch30
    • Molecular targeted therapy. Allgayer H, Fulda S, Hereditary Tumors: From Genes to Clinical Consequences Weinheim, Germany: Wiley-VCH Verlag GmbH & Co. KGaA, Allgayer H, Rehder H, Fulda S, 2009 501 514 doi:10.1002/9783527627523. ch30
    • (2009) Hereditary Tumors: From Genes to Clinical Consequences , pp. 501-514
    • Allgayer, H.1    Fulda, S.2
  • 4
    • 28544446695 scopus 로고    scopus 로고
    • Biomarkers in cancer staging, prognosis and treatment selection
    • DOI 10.1038/nrc1739
    • Biomarkers in cancer staging, prognosis and treatment selection. Ludwig JA, Weinstein JN, Nat Rev Canc 2005 5 845 856 10.1038/nrc1739 (Pubitemid 41746029)
    • (2005) Nature Reviews Cancer , vol.5 , Issue.11 , pp. 845-856
    • Ludwig, J.A.1    Weinstein, J.N.2
  • 6
    • 9244246248 scopus 로고    scopus 로고
    • The differential proteome profile of stomach cancer: Identification of the biomarker candidates
    • The differential proteome profile of stomach cancer: identification of the biomarker candidates. Jang JS, Cho HY, Lee YJ, Ha WS, Kim HW, Oncol Res 2004 14 491 499 15559763 (Pubitemid 39551562)
    • (2004) Oncology Research , vol.14 , Issue.10 , pp. 491-499
    • Jang, J.S.1    Cho, H.Y.2    Lee, Y.J.3    Ha, W.S.4    Kim, H.W.5
  • 7
    • 3042551552 scopus 로고    scopus 로고
    • Search for new biomarkers of gastric cancer through serial analysis of gene expression and its clinical implications
    • DOI 10.1111/j.1349-7006.2004.tb03220.x
    • Search for new biomarkers of gastric cancer through serial analysis of gene expression and its clinical implications. Yasui W, Oue N, Ito R, Kuraoka K, Nakayama H, Cancer Sci 2004 95 385 392 10.1111/j.1349-7006.2004.tb03220.x 15132764 (Pubitemid 38832680)
    • (2004) Cancer Science , vol.95 , Issue.5 , pp. 385-392
    • Yasui, W.1    Oue, N.2    Ito, R.3    Kuraoka, K.4    Nakayama, H.5
  • 8
    • 34347348170 scopus 로고    scopus 로고
    • Reg IV is a serum biomarker for gastric cancer patients and predicts response to 5-fluorouracil-based chemotherapy
    • DOI 10.1038/sj.onc.1210215, PII 1210215
    • Reg IV is a serum biomarker for gastric cancer patients and predicts response to 5-fluorouracil-based chemotherapy. Mitani Y, Oue N, Matsumura S, Yoshida K, Noguchi T, Ito M, Tanaka S, Kuniyasu H, Kamata N, Yasui W, Oncogene 2007 26 4383 4393 10.1038/sj.onc.1210215 17237819 (Pubitemid 47014457)
    • (2007) Oncogene , vol.26 , Issue.30 , pp. 4383-4393
    • Mitani, Y.1    Oue, N.2    Matsumura, S.3    Yoshida, K.4    Noguchi, T.5    Ito, M.6    Tanaka, S.7    Kuniyasu, H.8    Kamata, N.9    Yasui, W.10
  • 10
    • 68149092537 scopus 로고    scopus 로고
    • Adipocytokine levels in gastric cancer patients: Resistin and visfatin as biomarkers of gastric cancer
    • 10.1007/s00535-009-0063-5 19430715
    • Adipocytokine levels in gastric cancer patients: resistin and visfatin as biomarkers of gastric cancer. Nakajima T, Yamada Y, Hamano T, Furuta K, Gotoda T, Katai H, Kato K, Hamaguchi T, Shimada Y, J Gastroenterol 2009 44 685 690 10.1007/s00535-009-0063-5 19430715
    • (2009) J Gastroenterol , vol.44 , pp. 685-690
    • Nakajima, T.1    Yamada, Y.2    Hamano, T.3    Furuta, K.4    Gotoda, T.5    Katai, H.6    Kato, K.7    Hamaguchi, T.8    Shimada, Y.9
  • 16
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing. Benjamini Y, Hochberg Y, J R Stat Soc Series B Stat Methodol 1995 57 289 300
    • (1995) J R Stat Soc Series B Stat Methodol , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 18
    • 43149116763 scopus 로고    scopus 로고
    • Gene-set approach for expression pattern analysis
    • DOI 10.1093/bib/bbn001
    • Gene-set approach for expression pattern analysis. Nam D, Kim SY, Brief Bioinform 2008 9 189 197 10.1093/bib/bbn001 18202032 (Pubitemid 351637941)
    • (2008) Briefings in Bioinformatics , vol.9 , Issue.3 , pp. 189-197
    • Nam, D.1    Kim, S.-Y.2
  • 19
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • 19131956
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. da Huang W, Sherman BT, Lempicki RA, Nat Protoc 2009 4 44 57 19131956
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Da Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 22
    • 78651289019 scopus 로고    scopus 로고
    • HitPredict: A database of quality assessed protein-protein interactions in nine species
    • 20947562
    • HitPredict: a database of quality assessed protein-protein interactions in nine species. Patil A, Nakai K, Nakamura H, Nucleic Acids Res 2011 39 Database issue 744 D749 20947562
    • (2011) Nucleic Acids Res , vol.39 , Issue.DATABASE ISSUE
    • Patil, A.1    Nakai, K.2    Nakamura, H.3
  • 25
    • 24044434446 scopus 로고    scopus 로고
    • Filtering high-throughput protein-protein interaction data using a combination of genomic features
    • DOI 10.1186/1471-2105-6-100
    • Filtering high-throughput protein-protein interaction data using a combination of genomic features. Patil A, Nakamura H, BMC Bioinformatics 2005 6 100 10.1186/1471-2105-6-100 15833142 (Pubitemid 41371906)
    • (2005) BMC Bioinformatics , vol.6 , pp. 100
    • Patil, A.1    Nakamura, H.2
  • 27
    • 84864494098 scopus 로고    scopus 로고
    • GeneCodis3: A non-redundant and modular enrichment analysis tool for functional genomics
    • 22573175
    • GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics. Tabas-Madrid D, Nogales-Cadenas R, Pascual-Montano A, Nucleic Acids Res 2012 40 Web Server issue 478 W483 22573175
    • (2012) Nucleic Acids Res , vol.40 , Issue.WEB SERVER ISSUE
    • Tabas-Madrid, D.1    Nogales-Cadenas, R.2    Pascual-Montano, A.3
  • 29
    • 33847205295 scopus 로고    scopus 로고
    • GENECODIS: A web-based tool for finding significant concurrent annotations in gene lists
    • 10.1186/gb-2007-8-1-r3 17204154
    • GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists. Carmona-Saez P, Chagoyen M, Tirado F, Carazo JM, Pascual-Montano A, Genome Biol 2007 8 3 10.1186/gb-2007-8-1-r3 17204154
    • (2007) Genome Biol , vol.8 , pp. 183
    • Carmona-Saez, P.1    Chagoyen, M.2    Tirado, F.3    Carazo, J.M.4    Pascual-Montano, A.5
  • 30
    • 0027938209 scopus 로고
    • Cyclins and cancer II: Cyclin D and CDK inhibitors come of age
    • DOI 10.1016/0092-8674(94)90543-6
    • Cyclins and cancer II: cyclin D and CDK inhibitors come of age. Hunter T, Pines J, Cell 1994 79 573 582 10.1016/0092-8674(94)90543-6 7954824 (Pubitemid 24363801)
    • (1994) Cell , vol.79 , Issue.4 , pp. 573-582
    • Hunter, T.1    Pines, J.2
  • 31
    • 0033059651 scopus 로고    scopus 로고
    • Expression of Fas ligand by human gastric adenocarcinomas: A potential mechanism of immune escape in stomach cancer
    • Expression of Fas ligand by human gastric adenocarcinomas: a potential mechanism of immune escape in stomach cancer. Bennett MW, O'Connell J, O'Sullivan GC, Roche D, Brady C, Kelly J, Collins JK, Shanahan F, Gut 1999 44 156 162 10.1136/gut.44.2.156 9895372 (Pubitemid 29119356)
    • (1999) Gut , vol.44 , Issue.2 , pp. 156-162
    • Bennett, M.W.1    O'Connell, J.2    O'Sullivan, G.C.3    Roche, D.4    Brady, C.5    Kelly, J.6    Collins, J.K.7    Shanahan, F.8
  • 32
    • 33947179887 scopus 로고    scopus 로고
    • TLR4 signaling promotes immune escape of human lung cancer cells by inducing immunosuppressive cytokines and apoptosis resistance
    • DOI 10.1016/j.molimm.2007.01.022, PII S0161589007000521
    • TLR4 signaling promotes immune escape of human lung cancer cells by inducing immunosuppressive cytokines and apoptosis resistance. He W, Liu Q, Wang L, Chen W, Li N, Cao X, Mol Immunol 2007 44 2850 2859 10.1016/j.molimm.2007.01. 022 17328955 (Pubitemid 46412506)
    • (2007) Molecular Immunology , vol.44 , Issue.11 , pp. 2850-2859
    • He, W.1    Liu, Q.2    Wang, L.3    Chen, W.4    Li, N.5    Cao, X.6
  • 33
    • 33646839443 scopus 로고    scopus 로고
    • Nek2 kinase in chromosome instability and cancer
    • DOI 10.1016/j.canlet.2005.06.017, PII S0304383505005616
    • Nek2 kinase in chromosome instability and cancer. Hayward DG, Fry AM, Cancer Lett 2006 237 155 166 10.1016/j.canlet.2005.06.017 16084011 (Pubitemid 43777084)
    • (2006) Cancer Letters , vol.237 , Issue.2 , pp. 155-166
    • Hayward, D.G.1    Fry, A.M.2
  • 34
    • 33646345376 scopus 로고    scopus 로고
    • Ubiquitin ligases: Cell-cycle control and cancer
    • 10.1038/nrc1881 16633365
    • Ubiquitin ligases: cell-cycle control and cancer. Nakayama KI, Nakayama K, Nat Rev Cancer 2006 6 369 381 10.1038/nrc1881 16633365
    • (2006) Nat Rev Cancer , vol.6 , pp. 369-381
    • Nakayama, K.I.1    Nakayama, K.2
  • 36
    • 33645576066 scopus 로고    scopus 로고
    • Correlation of invasion and metastasis of cancer cells, and expression of the RAD21 gene in oral squamous cell carcinoma
    • 10.1007/s00428-005-0132-y 16416296
    • Correlation of invasion and metastasis of cancer cells, and expression of the RAD21 gene in oral squamous cell carcinoma. Yamamoto G, Irie T, Aida T, Nagoshi Y, Tsuchiya R, Tachikawa T, Virchows Arch 2006 448 435 441 10.1007/s00428-005-0132-y 16416296
    • (2006) Virchows Arch , vol.448 , pp. 435-441
    • Yamamoto, G.1    Irie, T.2    Aida, T.3    Nagoshi, Y.4    Tsuchiya, R.5    Tachikawa, T.6
  • 37
  • 38
    • 84859754952 scopus 로고    scopus 로고
    • Polymorphism of THBS1 rs1478604 A>G in 5-untranslated region is associated with lymph node metastasis of gastric cancer in a Southeast Chinese population
    • 10.1089/dna.2011.1344 22011138
    • Polymorphism of THBS1 rs1478604 A>G in 5-untranslated region is associated with lymph node metastasis of gastric cancer in a Southeast Chinese population. Lin XD, Chen SQ, Qi YL, Zhu JW, Tang Y, Lin JY, DNA Cell Biol 2012 31 511 519 10.1089/dna.2011.1344 22011138
    • (2012) DNA Cell Biol , vol.31 , pp. 511-519
    • Lin, X.D.1    Chen, S.Q.2    Qi, Y.L.3    Zhu, J.W.4    Tang, Y.5    Lin, J.Y.6
  • 39
    • 34347391477 scopus 로고    scopus 로고
    • Development of anti-PAX3 immune responses; a target for cancer immunotherapy
    • DOI 10.1007/s00262-007-0294-3
    • Development of anti-PAX3 immune responses: a target for cancer immunotherapy. Himoudi N, Nabarro S, Yan M, Gilmour K, Thrasher AJ, Anderson J, Cancer Immunol Immunother 2007 56 1381 1395 10.1007/s00262-007-0294-3 17318653 (Pubitemid 47024714)
    • (2007) Cancer Immunology, Immunotherapy , vol.56 , Issue.9 , pp. 1381-1395
    • Himoudi, N.1    Nabarro, S.2    Yan, M.3    Gilmour, K.4    Thrasher, A.J.5    Anderson, J.6
  • 40
    • 0942279633 scopus 로고    scopus 로고
    • Extracellular matrix regulates glomerular epithelial cell survival and proliferation
    • 10.1152/ajprenal.00259.2003 14559718
    • Extracellular matrix regulates glomerular epithelial cell survival and proliferation. Bijian K, Takano T, Papillon J, Khadir A, Cybulsky AV, Am J Physiol Renal Physiol 2004 286 255 F266 10.1152/ajprenal.00259.2003 14559718
    • (2004) Am J Physiol Renal Physiol , vol.286
    • Bijian, K.1    Takano, T.2    Papillon, J.3    Khadir, A.4    Cybulsky, A.V.5
  • 41
    • 72949119124 scopus 로고    scopus 로고
    • Integrins in cancer: Biological implications and therapeutic opportunities
    • 20029421
    • Integrins in cancer: biological implications and therapeutic opportunities. Desgrosellier JS, Cheresh DA, Nat Rev Cancer 2010 10 9 22 20029421
    • (2010) Nat Rev Cancer , vol.10 , pp. 9-22
    • Desgrosellier, J.S.1    Cheresh, D.A.2
  • 43
    • 80955178831 scopus 로고    scopus 로고
    • Expression and prognostic significance of CEACAM6, ITGB1, and CYR61 in peripheral blood of patients with gastric cancer
    • 10.1002/jso.21984 21618249
    • Expression and prognostic significance of CEACAM6, ITGB1, and CYR61 in peripheral blood of patients with gastric cancer. Zhao ZS, Li L, Wang HJ, Wang YY, J Surg Oncol 2011 104 525 529 10.1002/jso.21984 21618249
    • (2011) J Surg Oncol , vol.104 , pp. 525-529
    • Zhao, Z.S.1    Li, L.2    Wang, H.J.3    Wang, Y.Y.4
  • 44
    • 84865306060 scopus 로고    scopus 로고
    • Alteration in metastasis potential and gene expression in human lung cancer cell lines by ITGB8 silencing
    • 10.1002/ar.22521
    • Alteration in metastasis potential and gene expression in human lung cancer cell lines by ITGB8 silencing. Xu Z, Wu R, Anat Rec (Hoboken) 2012 295 1446 1454 10.1002/ar.22521
    • (2012) Anat Rec (Hoboken) , vol.295 , pp. 1446-1454
    • Xu, Z.1    Wu, R.2


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