메뉴 건너뛰기




Volumn 39, Issue SUPPL. 1, 2011, Pages

HitPredict: A database of quality assessed protein-protein interactions in nine species

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; CONTENT ANALYSIS; DATA ANALYSIS; FACTUAL DATABASE; HITPREDICT DATABASE; INFORMATION PROCESSING; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; QUALITY CONTROL; RELIABILITY; SPECIES COMPARISON;

EID: 78651289019     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq897     Document Type: Article
Times cited : (100)

References (29)
  • 3
    • 0037161731 scopus 로고    scopus 로고
    • Comparative assessment of large-scale data sets of protein-protein interactions
    • von Mering, C., Krause, R., Snel, B., Cornell, M., Oliver, S.G., Fields, S. and Bork P. (2002) Comparative assessment of large-scale data sets of protein-protein interactions. Nature, 417, 399-403.
    • (2002) Nature , vol.417 , pp. 399-403
    • Von Mering, C.1    Krause, R.2    Snel, B.3    Cornell, M.4    Oliver, S.G.5    Fields, S.6    Bork, P.7
  • 6
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The biomolecular interaction network database
    • Bader, G.D., Betel, D. and Hogue, C.W. (2003) BIND: The biomolecular interaction network database. Nucleic Acids Res., 31, 248-250.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 248-250
    • Bader, G.D.1    Betel, D.2    Hogue, C.W.3
  • 13
    • 54949127160 scopus 로고    scopus 로고
    • IRefIndex: A consolidated protein interaction database with provenance
    • Razick, S., Magklaras, G. and Donaldson, I. (2008) iRefIndex: A consolidated protein interaction database with provenance. BMC Bioinformatics, 9, 405.
    • (2008) BMC Bioinformatics , vol.9 , pp. 405
    • Razick, S.1    Magklaras, G.2    Donaldson, I.3
  • 14
    • 33747853260 scopus 로고    scopus 로고
    • APID: Agile protein interaction dataanalyzer
    • Prieto, C. and De Las Rivas J. (2006) APID: Agile protein interaction dataanalyzer. Nucleic Acids Res., 34, W298-W302.
    • (2006) Nucleic Acids Res. , vol.34
    • Prieto, C.1    De Las Rivas, J.2
  • 15
    • 0036580169 scopus 로고    scopus 로고
    • Protein interactions: Two methods for assessment of the reliability of high throughput observations
    • Deane, C.M., Salwinski, L., Xenarios, I. and Eisenberg, D. (2002) Protein interactions: Two methods for assessment of the reliability of high throughput observations. Mol. Cell Proteomics, 1, 349-356.
    • (2002) Mol. Cell Proteomics , vol.1 , pp. 349-356
    • Deane, C.M.1    Salwinski, L.2    Xenarios, I.3    Eisenberg, D.4
  • 16
    • 0037432528 scopus 로고    scopus 로고
    • How reliable are experimental protein-protein interaction data?
    • Sprinzak, E., Sattath, S. and Margalit, H. (2003) How reliable are experimental protein-protein interaction data? J. Mol. Biol., 327, 919-923.
    • (2003) J. Mol. Biol. , vol.327 , pp. 919-923
    • Sprinzak, E.1    Sattath, S.2    Margalit, H.3
  • 17
    • 0242500972 scopus 로고    scopus 로고
    • Construction of reliable protein-protein interaction networks with a new interaction generality measure
    • Saito, R., Suzuki, H. and Hayashizaki, Y. (2003) Construction of reliable protein-protein interaction networks with a new interaction generality measure. Bioinformatics, 19, 756-763.
    • (2003) Bioinformatics , vol.19 , pp. 756-763
    • Saito, R.1    Suzuki, H.2    Hayashizaki, Y.3
  • 18
    • 0347473809 scopus 로고    scopus 로고
    • Gaining confidence in high-throughput protein interaction networks
    • Bader J.S., Chaudhuri, A., Rothberg J.M. and Chant J. (2004) Gaining confidence in high-throughput protein interaction networks. Nat. Biotech., 22, 78-85.
    • (2004) Nat. Biotech. , vol.22 , pp. 78-85
    • Bader, J.S.1    Chaudhuri, A.2    Rothberg, J.M.3    Chant, J.4
  • 19
    • 46749130932 scopus 로고    scopus 로고
    • PRINCESS, a protein interaction confidence evaluation system with multiple data sources
    • Li, D., Liu, W., Liu, Z., Wang J., Liu, Q., Zhu, Y. and He, F. (2008) PRINCESS, a protein interaction confidence evaluation system with multiple data sources. Mol. Cell Proteomics, 7, 1043-1052.
    • (2008) Mol. Cell Proteomics , vol.7 , pp. 1043-1052
    • Li, D.1    Liu, W.2    Liu, Z.3    Wang, J.4    Liu, Q.5    Zhu, Y.6    He, F.7
  • 20
    • 33947712535 scopus 로고    scopus 로고
    • WI-PHI: A weighted yeast interactome enriched for direct physical interactions
    • Kiemer, L., Costa, S., Ueffing, M. and Cesareni, G. (2007) WI-PHI: A weighted yeast interactome enriched for direct physical interactions. Proteomics, 7, 932-943.
    • (2007) Proteomics , vol.7 , pp. 932-943
    • Kiemer, L.1    Costa, S.2    Ueffing, M.3    Cesareni, G.4
  • 21
    • 24044434446 scopus 로고    scopus 로고
    • Filtering high-throughput protein-protein interaction data using a combination of genomic features
    • Patil, A. and Nakamura, H. (2005) Filtering high-throughput protein-protein interaction data using a combination of genomic features. BMC Bioinformatics, 6, 100.
    • (2005) BMC Bioinformatics , vol.6 , pp. 100
    • Patil, A.1    Nakamura, H.2
  • 22
    • 75849153303 scopus 로고    scopus 로고
    • The universal protein resource (UniProt) in 2010
    • The UniProt Consortium
    • The UniProt Consortium. (2010) The universal protein resource (UniProt) in 2010. Nucleic Acids Res., 38, D142-D148.
    • (2010) Nucleic Acids Res. , vol.38
  • 25
    • 58149197601 scopus 로고    scopus 로고
    • 3did Update: Domain-domain and peptide-mediated interactions of known 3D structure
    • Stein, A., Panjkovich, A. and Aloy P. (2009) 3did Update: Domain-domain and peptide-mediated interactions of known 3D structure. Nucleic Acids Res., 37, D300-D304.
    • (2009) Nucleic Acids Res. , vol.37
    • Stein, A.1    Panjkovich, A.2    Aloy, P.3
  • 27
    • 25444433570 scopus 로고    scopus 로고
    • HINT - A database of annotated protein-protein interactions and their homologs
    • Patil, A. and Nakamura, H. (2005) HINT - a database of annotated protein-protein interactions and their homologs. BIOPHYSICS, 1, 21-24.
    • (2005) BIOPHYSICS , vol.1 , pp. 21-24
    • Patil, A.1    Nakamura, H.2
  • 29
    • 0037197902 scopus 로고    scopus 로고
    • Interrogating protein interaction networks through structural biology
    • Aloy P. and Russell, R.B. (2002) Interrogating protein interaction networks through structural biology. Proc. Natl Acad. Sci. USA, 99, 5896-5901.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 5896-5901
    • Aloy, P.1    Russell, R.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.