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Volumn 24, Issue 19, 2013, Pages 3069-3084

Translation- and SRP-independent mRNA targeting to the endoplasmic reticulum in the yeast Saccharomyces cerevisiae

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; MESSENGER RNA; RNA BINDING PROTEIN; SIGNAL RECOGNITION PARTICLE; URACIL;

EID: 84884760322     PISSN: 10591524     EISSN: 19394586     Source Type: Journal    
DOI: 10.1091/mbc.E13-01-0038     Document Type: Article
Times cited : (56)

References (53)
  • 1
    • 69549135202 scopus 로고    scopus 로고
    • To localize or not to localize: MRNA fate is in 3'UTR ends
    • Andreassi C, Riccio A (2009). To localize or not to localize: mRNA fate is in 3'UTR ends. Trends Cell Biol 19, 465-474.
    • (2009) Trends Cell Biol , vol.19 , pp. 465-474
    • Andreassi, C.1    Riccio, A.2
  • 2
    • 34247642111 scopus 로고    scopus 로고
    • MRNAs encoding polarity and exocytosis factors are cotransported with the cortical endoplasmic reticulum to the incipient bud in Saccharomyces cerevisiae
    • Aronov S, Gelin-Licht R, Zipor G, Haim L, Safran E, Gerst JE (2007). mRNAs encoding polarity and exocytosis factors are cotransported with the cortical endoplasmic reticulum to the incipient bud in Saccharomyces cerevisiae. Mol Cell Biol 27, 3441-3455.
    • (2007) Mol Cell Biol , vol.27 , pp. 3441-3455
    • Aronov, S.1    Gelin-Licht, R.2    Zipor, G.3    Haim, L.4    Safran, E.5    Gerst, J.E.6
  • 3
    • 84874764248 scopus 로고    scopus 로고
    • A network of cytosolic factors targets SRP-independent proteins to the endoplasmic reticulum
    • Ast T, Cohen G, Schuldiner M (2013). A network of cytosolic factors targets SRP-independent proteins to the endoplasmic reticulum. Cell 152, 1134-1145.
    • (2013) Cell , vol.152 , pp. 1134-1145
    • Ast, T.1    Cohen, G.2    Schuldiner, M.3
  • 5
    • 79851516418 scopus 로고    scopus 로고
    • Early targeting events during membrane protein biogenesis in Escherichia coli
    • Bibi E (2011). Early targeting events during membrane protein biogenesis in Escherichia coli. Biochim Biophys Acta 1808, 841-850.
    • (2011) Biochim Biophys Acta , vol.1808 , pp. 841-850
    • Bibi, E.1
  • 8
    • 0020078214 scopus 로고
    • Two differentially regulated mRNAs with different 5' ends encode secreted with intracellular forms of yeast invertase
    • Carlson M, Botstein D (1982). Two differentially regulated mRNAs with different 5' ends encode secreted with intracellular forms of yeast invertase. Cell 28, 145-154.
    • (1982) Cell , vol.28 , pp. 145-154
    • Carlson, M.1    Botstein, D.2
  • 9
    • 0020681321 scopus 로고
    • The secreted form of invertase in Saccharomyces cerevisiae is synthesized from mRNA encoding a signal sequence
    • Carlson M, Taussig R, Kustu S, Botstein D (1983). The secreted form of invertase in Saccharomyces cerevisiae is synthesized from mRNA encod-ing a signal sequence. Mol Cell Biol 3, 439-447.
    • (1983) Mol Cell Biol , vol.3 , pp. 439-447
    • Carlson, M.1    Taussig, R.2    Kustu, S.3    Botstein, D.4
  • 10
    • 84857129874 scopus 로고    scopus 로고
    • Widespread mRNA association with cytoskeletal motor proteins and identification and dynamics of myosin-associated mRNAs in S
    • Casolari JM, Thompson MA, Salzman J, Champion LM, Moerner WE, Brown PO (2012). Widespread mRNA association with cytoskeletal motor proteins and identification and dynamics of myosin-associated mRNAs in S. cerevisiae. PLoS One 7, e31912.
    • (2012) Cerevisiae. PLoS One , vol.7
    • Casolari, J.M.1    Thompson, M.A.2    Salzman, J.3    Champion, L.M.4    Moerner, W.E.5    Brown, P.O.6
  • 11
    • 79960316086 scopus 로고    scopus 로고
    • Hierarchical regulation of mRNA partitioning between the cytoplasm and the endoplasmic reticulum of mammalian cells
    • Chen Q, Jagannathan S, Reid D, Zheng T, Nicchitta C (2011). Hierarchical regulation of mRNA partitioning between the cytoplasm and the endoplasmic reticulum of mammalian cells. Mol Biol Cell 22, 2646-2658.
    • (2011) Mol Biol Cell , vol.22 , pp. 2646-2658
    • Chen, Q.1    Jagannathan, S.2    Reid, D.3    Zheng, T.4    Nicchitta, C.5
  • 12
    • 57649137957 scopus 로고    scopus 로고
    • Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum
    • Colomina N, Ferrezuelo F, Wang H, Aldea M, Gari E (2008). Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. J Biol Chem 283, 28670-28679.
    • (2008) J Biol Chem , vol.283 , pp. 28670-28679
    • Colomina, N.1    Ferrezuelo, F.2    Wang, H.3    Aldea, M.4    Gari, E.5
  • 13
    • 84861534927 scopus 로고    scopus 로고
    • P180 promotes the ribosome-independent localization of a subset of mRNA to the endoplasmic reticulum
    • Cui XA, Zhang H, Palazzo AF (2012). p180 promotes the ribosome-independent localization of a subset of mRNA to the endoplasmic reticulum. PLoS Biol 10, e1001336.
    • (2012) PLoS Biol , vol.10
    • Cui, X.A.1    Zhang, H.2    Palazzo, A.F.3
  • 14
    • 0029009741 scopus 로고
    • Selective inactivation of two components of the multiprotein transcription factor TFIIIB in cycloheximide growth-arrested yeast cells
    • Dieci G, Duimio L, Peracchia G, Ottonello S (1995). Selective inactivation of two components of the multiprotein transcription factor TFIIIB in cycloheximide growth-arrested yeast cells. J Biol Chem 270, 13476-13482.
    • (1995) J Biol Chem , vol.270 , pp. 13476-13482
    • Dieci, G.1    Duimio, L.2    Peracchia, G.3    Ottonello, S.4
  • 15
    • 0034020622 scopus 로고    scopus 로고
    • Large-scale identification of secreted and membrane-associated gene products using DNA microarrays
    • Diehn M, Eisen MB, Botstein D, Brown PO (2000). Large-scale identification of secreted and membrane-associated gene products using DNA microarrays. Nat Genet 25, 58-62.
    • (2000) Nat Genet , vol.25 , pp. 58-62
    • Diehn, M.1    Eisen, M.B.2    Botstein, D.3    Brown, P.O.4
  • 17
    • 79960445493 scopus 로고    scopus 로고
    • Localization of mRNAs coding for mitochondrial proteins in the yeast, Saccharomyces cerevisiae
    • Gadir N, Haim-Vilmovsky L, Kraut-Cohen J, Gerst JE (2011). Localization of mRNAs coding for mitochondrial proteins in the yeast, Saccharomyces cerevisiae. RNA 17, 1551-1565.
    • (2011) RNA , vol.17 , pp. 1551-1565
    • Gadir, N.1    Haim-Vilmovsky, L.2    Kraut-Cohen, J.3    Gerst, J.E.4
  • 18
    • 84861702462 scopus 로고    scopus 로고
    • Scp160-dependent mRNA trafficking mediates pheromone gradient sensing and chemotropism in yeast
    • Gelin-Licht R, Paliwal S, Conlon P, Levchenko A, Gerst JE (2012). Scp160-dependent mRNA trafficking mediates pheromone gradient sensing and chemotropism in yeast. Cell Rep 1, 483-494.
    • (2012) Cell Rep , vol.1 , pp. 483-494
    • Gelin-Licht, R.1    Paliwal, S.2    Conlon, P.3    Levchenko, A.4    Gerst, J.E.5
  • 19
    • 19344365947 scopus 로고    scopus 로고
    • Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast
    • Gerber AP, Herschlag D, Brown PO (2004). Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast. PLoS Biol 2, E79.
    • (2004) PLoS Biol , vol.2
    • Gerber, A.P.1    Herschlag, D.2    Brown, P.O.3
  • 20
    • 39149111232 scopus 로고    scopus 로고
    • Message on the web: MRNA and ER co-trafficking
    • Gerst JE (2008). Message on the web: mRNA and ER co-trafficking. Trends Cell Biol 18, 68-76.
    • (2008) Trends Cell Biol , vol.18 , pp. 68-76
    • Gerst, J.E.1
  • 21
    • 0016414490 scopus 로고
    • Beta-D-fructofuranoside fructohydrolase from yeast
    • Goldstein A, Lampen JO (1975). Beta-D-fructofuranoside fructohydrolase from yeast. Methods Enzymol 42, 504-511.
    • (1975) Methods Enzymol , vol.42 , pp. 504-511
    • Goldstein, A.1    Lampen, J.O.2
  • 22
    • 70249113697 scopus 로고    scopus 로고
    • M-TAG: A PCR-based genomic integration method to visualize the localization of specific endogenous mRNAs in vivo in yeast
    • Haim-Vilmovsky L, Gerst JE (2009). m-TAG: a PCR-based genomic integration method to visualize the localization of specific endogenous mRNAs in vivo in yeast. Nat Protocols 4, 1274-1284.
    • (2009) Nat Protocols , vol.4 , pp. 1274-1284
    • Haim-Vilmovsky, L.1    Gerst, J.E.2
  • 23
    • 79960038127 scopus 로고    scopus 로고
    • Visualizing endogenous mRNAs in living yeast using m-TAG, a PCR-based genomic integration method, and fluorescence microscopy
    • Haim-Vilmovsky L, Gerst JE (2011). Visualizing endogenous mRNAs in living yeast using m-TAG, a PCR-based genomic integration method, and fluorescence microscopy. Methods Mol Biol 714, 237-247.
    • (2011) Methods Mol Biol , vol.714 , pp. 237-247
    • Haim-Vilmovsky, L.1    Gerst, J.E.2
  • 24
    • 34250219568 scopus 로고    scopus 로고
    • A genomic integration method to visualize localization of endogenous mRNAs in living yeast
    • Haim L, Zipor G, Aronov S, Gerst JE (2007). A genomic integration method to visualize localization of endogenous mRNAs in living yeast. Nat Methods 4, 409-412.
    • (2007) Nat Methods , vol.4 , pp. 409-412
    • Haim, L.1    Zipor, G.2    Aronov, S.3    Gerst, J.E.4
  • 25
    • 34247329067 scopus 로고    scopus 로고
    • Cis-acting determinants of asymmetric, cytoplasmic RNA transport
    • Jambhekar A, Derisi JL (2007). Cis-acting determinants of asymmetric, cytoplasmic RNA transport. RNA 13, 625-642.
    • (2007) RNA , vol.13 , pp. 625-642
    • Jambhekar, A.1    Derisi, J.L.2
  • 26
    • 29144464175 scopus 로고    scopus 로고
    • Unbiased selection of localization elements reveals cis-acting determinants of mRNA bud localization in Saccharomyces cerevisiae
    • Jambhekar A, McDermott K, Sorber K, Shepard KA, Vale RD, Takizawa PA, DeRisi JL (2005). Unbiased selection of localization elements reveals cis-acting determinants of mRNA bud localization in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 102, 18005-18010.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 18005-18010
    • Jambhekar, A.1    McDermott, K.2    Sorber, K.3    Shepard, K.A.4    Vale, R.D.5    Takizawa, P.A.6    Derisi, J.L.7
  • 27
    • 77955116094 scopus 로고    scopus 로고
    • Defects in the secretory pathway and high Ca2+ induce multiple P-bodies
    • Kilchert C, Weidner J, Prescianotto-Baschong C, Spang A (2010). Defects in the secretory pathway and high Ca2+ induce multiple P-bodies. Mol Biol Cell 21, 2624-2638.
    • (2010) Mol Biol Cell , vol.21 , pp. 2624-2638
    • Kilchert, C.1    Weidner, J.2    Prescianotto-Baschong, C.3    Spang, A.4
  • 28
    • 77955273250 scopus 로고    scopus 로고
    • Addressing mRNAs to the ER: Cis sequences act up!
    • Kraut-Cohen J, Gerst JE (2010). Addressing mRNAs to the ER: cis se-quences act up! Trends Biochem Sci 35, 459-469.
    • (2010) Trends Biochem Sci , vol.35 , pp. 459-469
    • Kraut-Cohen, J.1    Gerst, J.E.2
  • 29
    • 0034733591 scopus 로고    scopus 로고
    • Rapid and reliable protein extraction from yeast
    • Kushnirov VV (2000). Rapid and reliable protein extraction from yeast. Yeast 30, 857-860.
    • (2000) Yeast , vol.30 , pp. 857-860
    • Kushnirov, V.V.1
  • 30
    • 33846651215 scopus 로고    scopus 로고
    • Inefficient targeting to the endoplasmic reticulum by the signal recognition particle elicits selective defects in post-ER membrane trafficking
    • Lakkaraju AK, Luyet PP, Parone P, Falguieres T, Strub K (2007). Inefficient targeting to the endoplasmic reticulum by the signal recognition particle elicits selective defects in post-ER membrane trafficking. Exp Cell Res 313, 834-847.
    • (2007) Exp Cell Res , vol.313 , pp. 834-847
    • Lakkaraju, A.K.1    Luyet, P.P.2    Parone, P.3    Falguieres, T.4    Strub, K.5
  • 31
  • 33
    • 0030875775 scopus 로고    scopus 로고
    • Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA
    • Long RM, Singer RH, Meng X, Gonzalez I, Nasmyth K, Jansen RP (1997). Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA. Science 277, 383-387.
    • (1997) Science , vol.277 , pp. 383-387
    • Long, R.M.1    Singer, R.H.2    Meng, X.3    Gonzalez, I.4    Nasmyth, K.5    Jansen, R.P.6
  • 34
    • 45749157145 scopus 로고    scopus 로고
    • The 3'-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein
    • Loya A, Pnueli L, Yosefzon Y, Wexler Y, Ziv-Ukelson M, Arava Y (2008). The 3'-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein. RNA 14, 1352-1365.
    • (2008) RNA , vol.14 , pp. 1352-1365
    • Loya, A.1    Pnueli, L.2    Yosefzon, Y.3    Wexler, Y.4    Ziv-Ukelson, M.5    Arava, Y.6
  • 35
    • 0032189258 scopus 로고    scopus 로고
    • Signal sequences: More than just greasy peptides
    • Martoglio B, Dobberstein B (1998). Signal sequences: more than just greasy peptides. Trends Cell Biol 8, 410-415.
    • (1998) Trends Cell Biol , vol.8 , pp. 410-415
    • Martoglio, B.1    Dobberstein, B.2
  • 36
    • 0035173051 scopus 로고    scopus 로고
    • Multifaceted physiological response allows yeast to adapt to the loss of the signal recognition particle-dependent protein-targeting pathway
    • Mutka SC, Walter P (2001). Multifaceted physiological response allows yeast to adapt to the loss of the signal recognition particle-dependent protein-targeting pathway. Mol Biol Cell 12, 577-588.
    • (2001) Mol Biol Cell , vol.12 , pp. 577-588
    • Mutka, S.C.1    Walter, P.2
  • 38
    • 32044449159 scopus 로고    scopus 로고
    • Pathways for compartmentalizing protein synthesis in eukaryotic cells: The template-partitioning model
    • Nicchitta CV, Lerner RS, Stephens SB, Dodd RD, Pyhtila B (2005). Pathways for compartmentalizing protein synthesis in eukaryotic cells: the template-partitioning model. Biochem Cell Biol 83, 687-695.
    • (2005) Biochem Cell Biol , vol.83 , pp. 687-695
    • Nicchitta, C.V.1    Lerner, R.S.2    Stephens, S.B.3    Dodd, R.D.4    Pyhtila, B.5
  • 39
    • 0000756130 scopus 로고
    • Secretion and cell-surface growth are blocked in a temperature-sensitive mutant of Saccharomyces cerevisiae
    • Novick P, Scheckman R (1979). Secretion and cell-surface growth are blocked in a temperature-sensitive mutant of Saccharomyces cerevisiae. Proc Natl Acad Sci USA 76, 1858-1862.
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 1858-1862
    • Novick, P.1    Scheckman, R.2
  • 40
    • 18944388902 scopus 로고    scopus 로고
    • Identification of a conserved RNA motif essential for She2p recognition and mRNA localization to the yeast bud
    • Olivier C, Poirier G, Gendron P, Boisgontier A, Major F, Chartrand P (2005). Identification of a conserved RNA motif essential for She2p recognition and mRNA localization to the yeast bud. Mol Cell Biol 25, 4752-4766.
    • (2005) Mol Cell Biol , vol.25 , pp. 4752-4766
    • Olivier, C.1    Poirier, G.2    Gendron, P.3    Boisgontier, A.4    Major, F.5    Chartrand, P.6
  • 41
    • 0031016249 scopus 로고    scopus 로고
    • Expression of the SUC2 gene of Saccharomyces cerevisiae is induced by low levels of glucose
    • Ozcan S, Vallier LG, Flick JS, Carlson M, Johnston M (1997). Expression of the SUC2 gene of Saccharomyces cerevisiae is induced by low levels of glucose. Yeast 13, 127-137.
    • (1997) Yeast , vol.13 , pp. 127-137
    • Ozcan, S.1    Vallier, L.G.2    Flick, J.S.3    Carlson, M.4    Johnston, M.5
  • 43
    • 66149134063 scopus 로고    scopus 로고
    • Studying membrane proteins through the eyes of the genetic code revealed a strong uracil bias in their coding mRNAs
    • Prilusky J, Bibi E (2009). Studying membrane proteins through the eyes of the genetic code revealed a strong uracil bias in their coding mRNAs. Proc Natl Acad Sci USA 106, 6662-6666.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 6662-6666
    • Prilusky, J.1    Bibi, E.2
  • 44
    • 40449115740 scopus 로고    scopus 로고
    • Signal sequence- and translation-independent mRNA localization to the endoplasmic reticulum
    • Pyhtila B, Zheng T, Lager PJ, Keene JD, Reedy MC, Nicchitta CV (2008). Signal sequence- and translation-independent mRNA localization to the endoplasmic reticulum. RNA 14, 445-453.
    • (2008) RNA , vol.14 , pp. 445-453
    • Pyhtila, B.1    Zheng, T.2    Lager, P.J.3    Keene, J.D.4    Reedy, M.C.5    Nicchitta, C.V.6
  • 45
    • 84857253794 scopus 로고    scopus 로고
    • Primary role for endoplasmic reticulum-bound ribosomes in cellular translation identified by ribosome profiling
    • Reid D, Nicchitta C (2012). Primary role for endoplasmic reticulum-bound ribosomes in cellular translation identified by ribosome profiling. J Biol Chem 287, 5518-5527.
    • (2012) J Biol Chem , vol.287 , pp. 5518-5527
    • Reid, D.1    Nicchitta, C.2
  • 46
    • 33746546711 scopus 로고    scopus 로고
    • Coordination of endoplasmic reticulum and mRNA localization to the yeast bud
    • Schmid M, Jaedicke A, Du TG, Jansen RP (2006). Coordination of endoplasmic reticulum and mRNA localization to the yeast bud. Curr Biol 16, 1538-1543.
    • (2006) Curr Biol , vol.16 , pp. 1538-1543
    • Schmid, M.1    Jaedicke, A.2    Du, T.G.3    Jansen, R.P.4
  • 48
    • 84934436976 scopus 로고    scopus 로고
    • Origins and evolution of cotranslational transport to the ER
    • Schwartz TU (2007). Origins and evolution of cotranslational transport to the ER. Adv Exp Med Biol 607, 52-60.
    • (2007) Adv Exp Med Biol , vol.607 , pp. 52-60
    • Schwartz, T.U.1
  • 50
    • 0030930836 scopus 로고    scopus 로고
    • Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast
    • Takizawa PA, Sil A, Swedlow JR, Herskowitz I, Vale RD (1997). Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast. Nature 389, 90-93.
    • (1997) Nature , vol.389 , pp. 90-93
    • Takizawa, P.A.1    Sil, A.2    Swedlow, J.R.3    Herskowitz, I.4    Vale, R.D.5
  • 52
    • 57149101122 scopus 로고    scopus 로고
    • Single-RNA counting reveals alternative modes of gene expression in yeast
    • Zenklusen D, Larson DR, Singer RH (2008). Single-RNA counting reveals alternative modes of gene expression in yeast. Nat Struct Mol Biol 15, 1263-1271.
    • (2008) Nat Struct Mol Biol , vol.15 , pp. 1263-1271
    • Zenklusen, D.1    Larson, D.R.2    Singer, R.H.3


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