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Volumn 9, Issue 9, 2013, Pages

Dealing with the Evolutionary Downside of CRISPR Immunity: Bacteria and Beneficial Plasmids

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTIVE IMMUNITY; ARTICLE; BACTERIAL IMMUNITY; BACTERIUM CONJUGATION; CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEAT; CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEAT CAS; COMPUTER SIMULATION; EUKARYOTE EVOLUTION; GENE DELETION; GENE FUNCTION; GENE LOCUS; GENE LOSS; GENE MUTATION; GENOTYPE; HOMOZYGOTE; HORIZONTAL GENE TRANSFER; IN VITRO STUDY; MATHEMATICAL ANALYSIS; MICROBIAL POPULATION DYNAMICS; MORTALITY; NONHUMAN; PLASMID; PROMOTER REGION; STAPHYLOCOCCUS EPIDERMIDIS;

EID: 84884696268     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003844     Document Type: Article
Times cited : (175)

References (70)
  • 1
    • 77957935381 scopus 로고    scopus 로고
    • CRISPR/Cas system and its role in phage-bacteria interactions
    • Deveau H, Garneau JE, Moineau S, (2010) CRISPR/Cas system and its role in phage-bacteria interactions. Annu Rev Microbiol 64: 475-493.
    • (2010) Annu Rev Microbiol , vol.64 , pp. 475-493
    • Deveau, H.1    Garneau, J.E.2    Moineau, S.3
  • 2
    • 79959319829 scopus 로고    scopus 로고
    • CRISPR-based adaptive immune systems
    • Terns MP, Terns RM, (2011) CRISPR-based adaptive immune systems. Curr Opin Microbiol 14: 321-327.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 321-327
    • Terns, M.P.1    Terns, R.M.2
  • 3
    • 84857097177 scopus 로고    scopus 로고
    • RNA-guided genetic silencing systems in bacteria and archaea
    • Wiedenheft B, Sternberg SH, Doudna JA, (2012) RNA-guided genetic silencing systems in bacteria and archaea. Nature 482: 331-338.
    • (2012) Nature , vol.482 , pp. 331-338
    • Wiedenheft, B.1    Sternberg, S.H.2    Doudna, J.A.3
  • 4
    • 23844505202 scopus 로고    scopus 로고
    • Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin
    • Bolotin A, Quinquis B, Sorokin A, Ehrlich SD, (2005) Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin. Microbiology 151: 2551-2561.
    • (2005) Microbiology , vol.151 , pp. 2551-2561
    • Bolotin, A.1    Quinquis, B.2    Sorokin, A.3    Ehrlich, S.D.4
  • 5
    • 16444385662 scopus 로고    scopus 로고
    • Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements
    • Mojica FJ, Diez-Villasenor C, Garcia-Martinez J, Soria E, (2005) Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements. J Mol Evol 60: 174-182.
    • (2005) J Mol Evol , vol.60 , pp. 174-182
    • Mojica, F.J.1    Diez-Villasenor, C.2    Garcia-Martinez, J.3    Soria, E.4
  • 6
    • 15844390228 scopus 로고    scopus 로고
    • CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
    • Pourcel C, Salvignol G, Vergnaud G, (2005) CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. Microbiology 151: 653-663.
    • (2005) Microbiology , vol.151 , pp. 653-663
    • Pourcel, C.1    Salvignol, G.2    Vergnaud, G.3
  • 7
    • 34047118522 scopus 로고    scopus 로고
    • CRISPR provides acquired resistance against viruses in prokaryotes
    • Barrangou R, Fremaux C, Deveau H, Richards M, Boyaval P, et al. (2007) CRISPR provides acquired resistance against viruses in prokaryotes. Science 315: 1709-1712.
    • (2007) Science , vol.315 , pp. 1709-1712
    • Barrangou, R.1    Fremaux, C.2    Deveau, H.3    Richards, M.4    Boyaval, P.5
  • 8
    • 84868143545 scopus 로고    scopus 로고
    • The CRISPR/Cas Adaptive Immune System of Pseudomonas aeruginosa Mediates Resistance to Naturally Occurring and Engineered Phages
    • Cady KC, Bondy-Denomy J, Heussler GE, Davidson AR, O'Toole GA, (2012) The CRISPR/Cas Adaptive Immune System of Pseudomonas aeruginosa Mediates Resistance to Naturally Occurring and Engineered Phages. J Bacteriol 194: 5728-5738.
    • (2012) J Bacteriol , vol.194 , pp. 5728-5738
    • Cady, K.C.1    Bondy-Denomy, J.2    Heussler, G.E.3    Davidson, A.R.4    O'Toole, G.A.5
  • 9
    • 84876001507 scopus 로고    scopus 로고
    • The population and evolutionary dynamics of phage and bacteria with CRISPR-mediated immunity
    • doi: 10.1371/journal.pgen.1003312
    • Levin BR, Moineau S, Bushman M, Barrangou R, (2013) The population and evolutionary dynamics of phage and bacteria with CRISPR-mediated immunity. PLoS Genet 9(3): e1003312 doi:10.1371/journal.pgen.1003312.
    • (2013) PLoS Genet , vol.9 , Issue.3
    • Levin, B.R.1    Moineau, S.2    Bushman, M.3    Barrangou, R.4
  • 11
    • 80053169737 scopus 로고    scopus 로고
    • Structures of the RNA-guided surveillance complex from a bacterial immune system
    • Wiedenheft B, Lander GC, Zhou K, Jore MM, Brouns SJ, et al. (2011) Structures of the RNA-guided surveillance complex from a bacterial immune system. Nature 477: 486-489.
    • (2011) Nature , vol.477 , pp. 486-489
    • Wiedenheft, B.1    Lander, G.C.2    Zhou, K.3    Jore, M.M.4    Brouns, S.J.5
  • 12
    • 78149261827 scopus 로고    scopus 로고
    • The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
    • Garneau JE, Dupuis ME, Villion M, Romero DA, Barrangou R, et al. (2010) The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature 468: 67-71.
    • (2010) Nature , vol.468 , pp. 67-71
    • Garneau, J.E.1    Dupuis, M.E.2    Villion, M.3    Romero, D.A.4    Barrangou, R.5
  • 13
    • 70449753811 scopus 로고    scopus 로고
    • RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex
    • Hale CR, Zhao P, Olson S, Duff MO, Graveley BR, et al. (2009) RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Cell 139: 945-956.
    • (2009) Cell , vol.139 , pp. 945-956
    • Hale, C.R.1    Zhao, P.2    Olson, S.3    Duff, M.O.4    Graveley, B.R.5
  • 15
    • 84866138092 scopus 로고    scopus 로고
    • RNA-mediated programmable DNA cleavage
    • Barrangou R, (2012) RNA-mediated programmable DNA cleavage. Nat Biotechnol 30: 836-838.
    • (2012) Nat Biotechnol , vol.30 , pp. 836-838
    • Barrangou, R.1
  • 16
    • 84864864464 scopus 로고    scopus 로고
    • Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system
    • Datsenko KA, Pougach K, Tikhonov A, Wanner BL, Severinov K, et al. (2012) Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system. Nat Commun 3: 945.
    • (2012) Nat Commun , vol.3 , pp. 945
    • Datsenko, K.A.1    Pougach, K.2    Tikhonov, A.3    Wanner, B.L.4    Severinov, K.5
  • 17
    • 84866023604 scopus 로고    scopus 로고
    • Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms
    • Erdmann S, Garrett RA, (2012) Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms. Mol Microbiol 85: 1044-1056.
    • (2012) Mol Microbiol , vol.85 , pp. 1044-1056
    • Erdmann, S.1    Garrett, R.A.2
  • 19
    • 84861639567 scopus 로고    scopus 로고
    • Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli
    • Yosef I, Goren MG, Qimron U, (2012) Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli. Nucleic Acids Res 40: 5569-5576.
    • (2012) Nucleic Acids Res , vol.40 , pp. 5569-5576
    • Yosef, I.1    Goren, M.G.2    Qimron, U.3
  • 20
    • 84863491748 scopus 로고    scopus 로고
    • Multiscale model of CRISPR-induced coevolutionary dynamics: diversification at the interface of Lamarck and Darwin
    • Childs LM, Held NL, Young MJ, Whitaker RJ, Weitz JS, (2012) Multiscale model of CRISPR-induced coevolutionary dynamics: diversification at the interface of Lamarck and Darwin. Evolution 66: 2015-2029.
    • (2012) Evolution , vol.66 , pp. 2015-2029
    • Childs, L.M.1    Held, N.L.2    Young, M.J.3    Whitaker, R.J.4    Weitz, J.S.5
  • 21
    • 78449240715 scopus 로고    scopus 로고
    • Nasty viruses, costly plasmids, population dynamics, and the conditions for establishing and maintaining CRISPR-mediated adaptive immunity in bacteria
    • Levin BR, (2010) Nasty viruses, costly plasmids, population dynamics, and the conditions for establishing and maintaining CRISPR-mediated adaptive immunity in bacteria. PLoS Genet 6: e1001171.
    • (2010) PLoS Genet , vol.6
    • Levin, B.R.1
  • 23
  • 24
    • 77955085897 scopus 로고    scopus 로고
    • Self-targeting by CRISPR: gene regulation or autoimmunity?
    • Stern A, Keren L, Wurtzel O, Amitai G, Sorek R, (2010) Self-targeting by CRISPR: gene regulation or autoimmunity? Trends Genet 26: 335-340.
    • (2010) Trends Genet , vol.26 , pp. 335-340
    • Stern, A.1    Keren, L.2    Wurtzel, O.3    Amitai, G.4    Sorek, R.5
  • 25
    • 57849137502 scopus 로고    scopus 로고
    • CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA
    • Marraffini LA, Sontheimer EJ, (2008) CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA. Science 322: 1843-1845.
    • (2008) Science , vol.322 , pp. 1843-1845
    • Marraffini, L.A.1    Sontheimer, E.J.2
  • 26
    • 84866043524 scopus 로고    scopus 로고
    • The highly dynamic CRISPR1 system of Streptococcus agalactiae controls the diversity of its mobilome
    • Lopez-Sanchez MJ, Sauvage E, Da Cunha V, Clermont D, Ratsima Hariniaina E, et al. (2012) The highly dynamic CRISPR1 system of Streptococcus agalactiae controls the diversity of its mobilome. Mol Microbiol 85: 1057-1071.
    • (2012) Mol Microbiol , vol.85 , pp. 1057-1071
    • Lopez-Sanchez, M.J.1    Sauvage, E.2    Da Cunha, V.3    Clermont, D.4    Ratsima Hariniaina, E.5
  • 27
    • 84865144676 scopus 로고    scopus 로고
    • CRISPR interference can prevent natural transformation and virulence acquisition during in vivo bacterial infection
    • Bikard D, Hatoum-Aslan A, Mucida D, Marraffini LA, (2012) CRISPR interference can prevent natural transformation and virulence acquisition during in vivo bacterial infection. Cell host & microbe 12: 177-186.
    • (2012) Cell Host & Microbe , vol.12 , pp. 177-186
    • Bikard, D.1    Hatoum-Aslan, A.2    Mucida, D.3    Marraffini, L.A.4
  • 28
    • 84878193178 scopus 로고    scopus 로고
    • Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis
    • Zhang Y, Heidrich N, Ampattu BJ, Gunderson CW, Seifert HS, et al. (2013) Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis. Mol Cell 50: 488-503.
    • (2013) Mol Cell , vol.50 , pp. 488-503
    • Zhang, Y.1    Heidrich, N.2    Ampattu, B.J.3    Gunderson, C.W.4    Seifert, H.S.5
  • 29
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms of, and barriers to, horizontal gene transfer between bacteria
    • Thomas CM, Nielsen KM, (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3: 711-721.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 30
    • 33750429636 scopus 로고    scopus 로고
    • Prophages of Staphylococcus aureus Newman and their contribution to virulence
    • Bae T, Baba T, Hiramatsu K, Schneewind O, (2006) Prophages of Staphylococcus aureus Newman and their contribution to virulence. Mol Microbiol 62: 1035-1047.
    • (2006) Mol Microbiol , vol.62 , pp. 1035-1047
    • Bae, T.1    Baba, T.2    Hiramatsu, K.3    Schneewind, O.4
  • 31
    • 33644659999 scopus 로고    scopus 로고
    • Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus
    • Diep BA, Gill SR, Chang RF, Phan TH, Chen JH, et al. (2006) Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus. Lancet 367: 731-739.
    • (2006) Lancet , vol.367 , pp. 731-739
    • Diep, B.A.1    Gill, S.R.2    Chang, R.F.3    Phan, T.H.4    Chen, J.H.5
  • 32
    • 31344459549 scopus 로고    scopus 로고
    • Antimicrobial-resistant bacteria in the community setting
    • Furuya EY, Lowy FD, (2006) Antimicrobial-resistant bacteria in the community setting. Nat Rev Microbiol 4: 36-45.
    • (2006) Nat Rev Microbiol , vol.4 , pp. 36-45
    • Furuya, E.Y.1    Lowy, F.D.2
  • 33
    • 0344827209 scopus 로고    scopus 로고
    • Genetic analysis of a high-level vancomycin-resistant isolate of Staphylococcus aureus
    • Weigel LM, Clewell DB, Gill SR, Clark NC, McDougal LK, et al. (2003) Genetic analysis of a high-level vancomycin-resistant isolate of Staphylococcus aureus. Science 302: 1569-1571.
    • (2003) Science , vol.302 , pp. 1569-1571
    • Weigel, L.M.1    Clewell, D.B.2    Gill, S.R.3    Clark, N.C.4    McDougal, L.K.5
  • 34
    • 20144372744 scopus 로고    scopus 로고
    • Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain
    • Gill SR, Fouts DE, Archer GL, Mongodin EF, Deboy RT, et al. (2005) Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain. J Bacteriol 187: 2426-2438.
    • (2005) J Bacteriol , vol.187 , pp. 2426-2438
    • Gill, S.R.1    Fouts, D.E.2    Archer, G.L.3    Mongodin, E.F.4    Deboy, R.T.5
  • 35
    • 0035015238 scopus 로고    scopus 로고
    • Intranasal mupirocin reduces sternal wound infection after open heart surgery in diabetics and nondiabetics
    • Cimochowski GE, Harostock MD, Brown R, Bernardi M, Alonzo N, et al. (2001) Intranasal mupirocin reduces sternal wound infection after open heart surgery in diabetics and nondiabetics. Ann Thorac Surg 71: 1572-1579.
    • (2001) Ann Thorac Surg , vol.71 , pp. 1572-1579
    • Cimochowski, G.E.1    Harostock, M.D.2    Brown, R.3    Bernardi, M.4    Alonzo, N.5
  • 36
    • 29444456637 scopus 로고    scopus 로고
    • In vivo transfer of high-level mupirocin resistance from Staphylococcus epidermidis to methicillin-resistant Staphylococcus aureus associated with failure of mupirocin prophylaxis
    • Hurdle JG, O'Neill AJ, Mody L, Chopra I, Bradley SF, (2005) In vivo transfer of high-level mupirocin resistance from Staphylococcus epidermidis to methicillin-resistant Staphylococcus aureus associated with failure of mupirocin prophylaxis. J Antimicrob Chemother 56: 1166-1168.
    • (2005) J Antimicrob Chemother , vol.56 , pp. 1166-1168
    • Hurdle, J.G.1    O'Neill, A.J.2    Mody, L.3    Chopra, I.4    Bradley, S.F.5
  • 37
    • 77950634977 scopus 로고    scopus 로고
    • Livestock-associated methicillin-resistant Staphylococcus aureus sequence type 398 in humans, Canada
    • Golding GR, Bryden L, Levett PN, McDonald RR, Wong A, et al. (2010) Livestock-associated methicillin-resistant Staphylococcus aureus sequence type 398 in humans, Canada. Emerg Infect Dis 16: 587-594.
    • (2010) Emerg Infect Dis , vol.16 , pp. 587-594
    • Golding, G.R.1    Bryden, L.2    Levett, P.N.3    McDonald, R.R.4    Wong, A.5
  • 38
    • 84855753946 scopus 로고    scopus 로고
    • A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin
    • Holt DC, Holden MT, Tong SY, Castillo-Ramirez S, Clarke L, et al. (2011) A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin. Genome Biol Evol 3: 881-895.
    • (2011) Genome Biol Evol , vol.3 , pp. 881-895
    • Holt, D.C.1    Holden, M.T.2    Tong, S.Y.3    Castillo-Ramirez, S.4    Clarke, L.5
  • 39
    • 38949123143 scopus 로고    scopus 로고
    • Phage response to CRISPR-encoded resistance in Streptococcus thermophilus
    • Deveau H, Barrangou R, Garneau JE, Labonte J, Fremaux C, et al. (2008) Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J Bacteriol 190: 1390-1400.
    • (2008) J Bacteriol , vol.190 , pp. 1390-1400
    • Deveau, H.1    Barrangou, R.2    Garneau, J.E.3    Labonte, J.4    Fremaux, C.5
  • 40
    • 84871111437 scopus 로고    scopus 로고
    • Mobile CRISPR/Cas-mediated bacteriophage resistance in Lactococcus lactis
    • Millen AM, Horvath P, Boyaval P, Romero DA, (2012) Mobile CRISPR/Cas-mediated bacteriophage resistance in Lactococcus lactis. PLoS One 7: e51663.
    • (2012) PLoS One , vol.7
    • Millen, A.M.1    Horvath, P.2    Boyaval, P.3    Romero, D.A.4
  • 41
    • 77954423847 scopus 로고    scopus 로고
    • Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria
    • Chakraborty S, Snijders AP, Chakravorty R, Ahmed M, Tarek AM, et al. (2010) Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria. Mol Phylogenet Evol 56: 878-887.
    • (2010) Mol Phylogenet Evol , vol.56 , pp. 878-887
    • Chakraborty, S.1    Snijders, A.P.2    Chakravorty, R.3    Ahmed, M.4    Tarek, A.M.5
  • 42
    • 33744941078 scopus 로고    scopus 로고
    • The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes
    • Godde JS, Bickerton A, (2006) The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes. J Mol Evol 62: 718-729.
    • (2006) J Mol Evol , vol.62 , pp. 718-729
    • Godde, J.S.1    Bickerton, A.2
  • 43
  • 44
    • 0000324665 scopus 로고
    • Resource partitioning and the outcome of interspecific competition: a model and some general considerations
    • Stewart FM, Levin BR, (1973) Resource partitioning and the outcome of interspecific competition: a model and some general considerations. Amer Nat 107: 171-198.
    • (1973) Amer Nat , vol.107 , pp. 171-198
    • Stewart, F.M.1    Levin, B.R.2
  • 45
    • 84855475577 scopus 로고    scopus 로고
    • Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site
    • Hatoum-Aslan A, Maniv I, Marraffini LA, (2011) Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site. Proc Natl Acad Sci USA 108: 21218-21222.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 21218-21222
    • Hatoum-Aslan, A.1    Maniv, I.2    Marraffini, L.A.3
  • 46
    • 84884765703 scopus 로고    scopus 로고
    • A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAs
    • Hatoum-Aslan A, Samai P, Maniv I, Jiang W, Marraffini LA (2013) A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAs. J Biol Chem. In press.
    • (2013) J Biol Chem. In press
    • Hatoum-Aslan, A.1    Samai, P.2    Maniv, I.3    Jiang, W.4    Marraffini, L.A.5
  • 47
    • 77955552253 scopus 로고    scopus 로고
    • Success through diversity - how Staphylococcus epidermidis establishes as a nosocomial pathogen
    • Schoenfelder SM, Lange C, Eckart M, Hennig S, Kozytska S, et al. (2010) Success through diversity- how Staphylococcus epidermidis establishes as a nosocomial pathogen. Int J Med Microbiol 300: 380-386.
    • (2010) Int J Med Microbiol , vol.300 , pp. 380-386
    • Schoenfelder, S.M.1    Lange, C.2    Eckart, M.3    Hennig, S.4    Kozytska, S.5
  • 48
    • 0032896896 scopus 로고    scopus 로고
    • A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256
    • Ziebuhr W, Krimmer V, Rachid S, Lossner I, Gotz F, et al. (1999) A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256. Mol Microbiol 32: 345-356.
    • (1999) Mol Microbiol , vol.32 , pp. 345-356
    • Ziebuhr, W.1    Krimmer, V.2    Rachid, S.3    Lossner, I.4    Gotz, F.5
  • 49
    • 79960554003 scopus 로고    scopus 로고
    • Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems
    • Makarova KS, Aravind L, Wolf YI, Koonin EV, (2011) Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems. Biol Direct 6: 38.
    • (2011) Biol Direct , vol.6 , pp. 38
    • Makarova, K.S.1    Aravind, L.2    Wolf, Y.I.3    Koonin, E.V.4
  • 50
    • 0036250284 scopus 로고    scopus 로고
    • Construction and application of epitope- and green fluorescent protein-tagging integration vectors for Bacillus subtilis
    • Kaltwasser M, Wiegert T, Schumann W, (2002) Construction and application of epitope- and green fluorescent protein-tagging integration vectors for Bacillus subtilis. Appl Environ Microbiol 68: 2624-2628.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 2624-2628
    • Kaltwasser, M.1    Wiegert, T.2    Schumann, W.3
  • 51
    • 0020266466 scopus 로고
    • Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistance
    • Horinouchi S, Weisblum B, (1982) Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistance. J Bacteriol 150: 815-825.
    • (1982) J Bacteriol , vol.150 , pp. 815-825
    • Horinouchi, S.1    Weisblum, B.2
  • 52
    • 0001641514 scopus 로고
    • Mutations of Bacteria from Virus Sensitivity to Virus Resistance
    • Luria SE, Delbruck M, (1943) Mutations of Bacteria from Virus Sensitivity to Virus Resistance. Genetics 28: 491-511.
    • (1943) Genetics , vol.28 , pp. 491-511
    • Luria, S.E.1    Delbruck, M.2
  • 53
    • 0025886466 scopus 로고
    • A constant rate of spontaneous mutation in DNA-based microbes
    • Drake JW, (1991) A constant rate of spontaneous mutation in DNA-based microbes. Proc Natl Acad Sci USA 88: 7160-7164.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 7160-7164
    • Drake, J.W.1
  • 56
    • 84866951828 scopus 로고    scopus 로고
    • An archaeal immune system can detect multiple Protospacer Adjacent Motifs (PAMs) to target invader DNA
    • Fischer S, Maier LK, Stoll B, Brendel J, Fischer E, et al. (2012) An archaeal immune system can detect multiple Protospacer Adjacent Motifs (PAMs) to target invader DNA. J Biol Chem 287: 33351-33363.
    • (2012) J Biol Chem , vol.287 , pp. 33351-33363
    • Fischer, S.1    Maier, L.K.2    Stoll, B.3    Brendel, J.4    Fischer, E.5
  • 57
    • 78650244167 scopus 로고    scopus 로고
    • Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers
    • Gudbergsdottir S, Deng L, Chen Z, Jensen JV, Jensen LR, et al. (2011) Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers. Mol Microbiol 79: 35-49.
    • (2011) Mol Microbiol , vol.79 , pp. 35-49
    • Gudbergsdottir, S.1    Deng, L.2    Chen, Z.3    Jensen, J.V.4    Jensen, L.R.5
  • 58
    • 79952168979 scopus 로고    scopus 로고
    • Multidrug-resistant enterococci lack CRISPR-cas
    • Palmer KL, Gilmore MS, (2010) Multidrug-resistant enterococci lack CRISPR-cas. mBio 1.
    • (2010) MBio , vol.1
    • Palmer, K.L.1    Gilmore, M.S.2
  • 60
    • 34250662138 scopus 로고    scopus 로고
    • The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
    • Grissa I, Vergnaud G, Pourcel C, (2007) The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats. BMC Bioinformatics 8: 172.
    • (2007) BMC Bioinformatics , vol.8 , pp. 172
    • Grissa, I.1    Vergnaud, G.2    Pourcel, C.3
  • 61
    • 38149061877 scopus 로고    scopus 로고
    • Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses
    • Tyson GW, Banfield JF, (2008) Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses. Environ Microbiol 10: 200-2007.
    • (2008) Environ Microbiol , vol.10 , pp. 200-2007
    • Tyson, G.W.1    Banfield, J.F.2
  • 62
    • 70350646816 scopus 로고    scopus 로고
    • CRISPR elements in the Thermococcales: evidence for associated horizontal gene transfer in Pyrococcus furiosus
    • Portillo MC, Gonzalez JM, (2009) CRISPR elements in the Thermococcales: evidence for associated horizontal gene transfer in Pyrococcus furiosus. J Appl Genet 50: 421-430.
    • (2009) J Appl Genet , vol.50 , pp. 421-430
    • Portillo, M.C.1    Gonzalez, J.M.2
  • 63
    • 4544321685 scopus 로고    scopus 로고
    • Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion
    • Brussow H, Canchaya C, Hardt WD, (2004) Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev 68: 560-602.
    • (2004) Microbiol Mol Biol Rev , vol.68 , pp. 560-602
    • Brussow, H.1    Canchaya, C.2    Hardt, W.D.3
  • 64
    • 79251573217 scopus 로고    scopus 로고
    • Cryptic prophages help bacteria cope with adverse environments
    • Wang X, Kim Y, Ma Q, Hong SH, Pokusaeva K, et al. (2010) Cryptic prophages help bacteria cope with adverse environments. Nat Commun 1: 147.
    • (2010) Nat Commun , vol.1 , pp. 147
    • Wang, X.1    Kim, Y.2    Ma, Q.3    Hong, S.H.4    Pokusaeva, K.5
  • 65
    • 33645827531 scopus 로고    scopus 로고
    • Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach
    • Chen SL, Hung CS, Xu J, Reigstad CS, Magrini V, et al. (2006) Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. Proc Natl Acad Sci USA 103: 5977-5982.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 5977-5982
    • Chen, S.L.1    Hung, C.S.2    Xu, J.3    Reigstad, C.S.4    Magrini, V.5
  • 66
    • 34249751624 scopus 로고    scopus 로고
    • Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus
    • Myers GS, Parker D, Al-Hasani K, Kennan RM, Seemann T, et al. (2007) Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus. Nat Biotechnol 25: 569-575.
    • (2007) Nat Biotechnol , vol.25 , pp. 569-575
    • Myers, G.S.1    Parker, D.2    Al-Hasani, K.3    Kennan, R.M.4    Seemann, T.5
  • 69
    • 75749118174 scopus 로고    scopus 로고
    • Self versus non-self discrimination during CRISPR RNA-directed immunity
    • Marraffini LA, Sontheimer EJ, (2010) Self versus non-self discrimination during CRISPR RNA-directed immunity. Nature 463: 568-571.
    • (2010) Nature , vol.463 , pp. 568-571
    • Marraffini, L.A.1    Sontheimer, E.J.2
  • 70
    • 0026638608 scopus 로고
    • Sorting of protein A to the staphylococcal cell wall
    • Schneewind O, Model P, Fischetti VA, (1992) Sorting of protein A to the staphylococcal cell wall. Cell 70: 267-281.
    • (1992) Cell , vol.70 , pp. 267-281
    • Schneewind, O.1    Model, P.2    Fischetti, V.A.3


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