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Volumn 110, Issue 39, 2013, Pages 15740-15745

Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex

Author keywords

Evolution of sex; Parthenogenesis

Indexed keywords

ARTICLE; CHROMOSOME 8; CHROMOSOME 9; DAPHNIA PULEX; FEMALE; GENE CONVERSION; GENE DELETION; GENE LINKAGE DISEQUILIBRIUM; GENETIC ASSOCIATION; GENOME ANALYSIS; GENOMICS; GENOTYPE; HAPLOTYPE; HETEROZYGOSITY; HETEROZYGOSITY LOSS; INTROGRESSION; MALE; MOLECULAR PHYLOGENY; NONHUMAN; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; SISTER GROUP;

EID: 84884638276     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1313388110     Document Type: Article
Times cited : (127)

References (39)
  • 1
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • Hill WG, Robertson A (1966) The effect of linkage on limits to artificial selection. Genet Res 8(3):269-294.
    • (1966) Genet Res , vol.8 , Issue.3 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 2
    • 0342383237 scopus 로고
    • Effects of linkage on rates of molecular evolution
    • Birky CW, Jr., Walsh JB (1988) Effects of linkage on rates of molecular evolution. Proc Natl Acad Sci USA 85(17):6414-6418.
    • (1988) Proc Natl Acad Sci USA , vol.85 , Issue.17 , pp. 6414-6418
    • Birky Jr., C.W.1    Walsh, J.B.2
  • 3
    • 0025682946 scopus 로고
    • Mutation load and survival of small populations
    • Lynch M, Gabriel W (1990) Mutation load and survival of small populations. Evolution 44:1725-1737.
    • (1990) Evolution , vol.44 , pp. 1725-1737
    • Lynch, M.1    Gabriel, W.2
  • 4
    • 37349011445 scopus 로고    scopus 로고
    • The Hill-Robertson effect: Evolutionary consequences of weak selection and linkage in finite populations
    • Comeron JM, Williford A, Kliman RM (2008) The Hill-Robertson effect: Evolutionary consequences of weak selection and linkage in finite populations. Heredity (Edinb) 100(1):19-31.
    • (2008) Heredity (Edinb) , vol.100 , Issue.1 , pp. 19-31
    • Comeron, J.M.1    Williford, A.2    Kliman, R.M.3
  • 6
    • 0032566768 scopus 로고    scopus 로고
    • Why sex and recombination?
    • Barton NH, Charlesworth B (1998) Why sex and recombination? Science 281(5385): 1986-1990.
    • (1998) Science , vol.281 , Issue.5385 , pp. 1986-1990
    • Barton, N.H.1    Charlesworth, B.2
  • 7
    • 0027428093 scopus 로고
    • The mutational meltdown in asexual populations
    • Lynch M, Bürger R, Butcher D, Gabriel W (1993) The mutational meltdown in asexual populations. J Hered 84(5):339-344.
    • (1993) J Hered , vol.84 , Issue.5 , pp. 339-344
    • Lynch, M.1    Bürger, R.2    Butcher, D.3    Gabriel, W.4
  • 8
    • 0000592412 scopus 로고
    • The origin and genetic basis of obligate parthenogenesis in Daphnia pulex
    • Innes DJ, Hebert PDN (1988) The origin and genetic basis of obligate parthenogenesis in Daphnia pulex. Evolution 42:1024-1035.
    • (1988) Evolution , vol.42 , pp. 1024-1035
    • Innes, D.J.1    Hebert, P.D.N.2
  • 9
    • 17844407446 scopus 로고    scopus 로고
    • Evolutionary history of contagious asexuality in Daphnia pulex
    • Paland S, Colbourne JK, Lynch M (2005) Evolutionary history of contagious asexuality in Daphnia pulex. Evolution 59(4):800-813.
    • (2005) Evolution , vol.59 , Issue.4 , pp. 800-813
    • Paland, S.1    Colbourne, J.K.2    Lynch, M.3
  • 10
    • 56049095293 scopus 로고    scopus 로고
    • Localization of the genetic determinants of meiosis suppression in Daphnia pulex
    • Lynch M, Seyfert A, Eads B, Williams E (2008) Localization of the genetic determinants of meiosis suppression in Daphnia pulex. Genetics 180(1):317-327.
    • (2008) Genetics , vol.180 , Issue.1 , pp. 317-327
    • Lynch, M.1    Seyfert, A.2    Eads, B.3    Williams, E.4
  • 11
    • 79551632781 scopus 로고    scopus 로고
    • The ecoresponsive genome of Daphnia pulex
    • Colbourne JK, et al. (2011) The ecoresponsive genome of Daphnia pulex. Science 331(6017):555-561.
    • (2011) Science , vol.331 , Issue.6017 , pp. 555-561
    • Colbourne, J.K.1
  • 12
    • 0034686084 scopus 로고    scopus 로고
    • Evidence for the evolution of bdelloid rotifers without sexual reproduction or genetic exchange
    • Mark Welch D, Meselson M (2000) Evidence for the evolution of bdelloid rotifers without sexual reproduction or genetic exchange. Science 288(5469):1211-1215.
    • (2000) Science , vol.288 , Issue.5469 , pp. 1211-1215
    • Mark Welch, D.1    Meselson, M.2
  • 13
    • 0036213773 scopus 로고    scopus 로고
    • Strong inbreeding depression in a Daphnia metapopulation
    • Haag CR, Hottinger JW, Riek M, Ebert D (2002) Strong inbreeding depression in a Daphnia metapopulation. Evolution 56(3):518-526.
    • (2002) Evolution , vol.56 , Issue.3 , pp. 518-526
    • Haag, C.R.1    Hottinger, J.W.2    Riek, M.3    Ebert, D.4
  • 14
    • 0037127049 scopus 로고    scopus 로고
    • A selective advantage to immigrant genes in a Daphnia metapopulation
    • Ebert D, et al. (2002) A selective advantage to immigrant genes in a Daphnia metapopulation. Science 295(5554):485-488.
    • (2002) Science , vol.295 , Issue.5554 , pp. 485-488
    • Ebert, D.1
  • 15
    • 4544359571 scopus 로고    scopus 로고
    • A new hypothesis to explain geographic parthenogenesis
    • Haag C, Ebert D (2004) A new hypothesis to explain geographic parthenogenesis. Ann Zool Fenn 41:539-544.
    • (2004) Ann Zool Fenn , vol.41 , pp. 539-544
    • Haag, C.1    Ebert, D.2
  • 16
    • 78650463545 scopus 로고    scopus 로고
    • High rate of large-scale hemizygous deletions in asexually propagating Daphnia: Implications for the evolution of sex
    • Xu S, Omilian AR, Cristescu ME (2011) High rate of large-scale hemizygous deletions in asexually propagating Daphnia: Implications for the evolution of sex. Mol Biol Evol 28(1):335-342.
    • (2011) Mol Biol Evol , vol.28 , Issue.1 , pp. 335-342
    • Xu, S.1    Omilian, A.R.2    Cristescu, M.E.3
  • 17
    • 33751119291 scopus 로고    scopus 로고
    • Invasion of an asexual American water flea clone throughout Africa and rapid displacement of a native sibling species
    • Mergeay J, Verschuren D, De Meester L (2006) Invasion of an asexual American water flea clone throughout Africa and rapid displacement of a native sibling species. Proc Biol Sci 273(1603):2839-2844.
    • (2006) Proc Biol Sci , vol.273 , Issue.1603 , pp. 2839-2844
    • Mergeay, J.1    Verschuren, D.2    De Meester, L.3
  • 18
    • 63549083065 scopus 로고    scopus 로고
    • Ecological speciation in a cyclic parthenogen: Sexual capability of experimental hybrids between Daphnia pulex and Daphnia pulicaria
    • Heier CR, Dudycha JL (2009) Ecological speciation in a cyclic parthenogen: Sexual capability of experimental hybrids between Daphnia pulex and Daphnia pulicaria. Limnol Oceanogr 54:492-502.
    • (2009) Limnol Oceanogr , vol.54 , pp. 492-502
    • Heier, C.R.1    Dudycha, J.L.2
  • 19
    • 79952404896 scopus 로고    scopus 로고
    • Reticulate evolution of the Daphnia pulex complex as revealed by nuclear markers
    • Vergilino R, Markova S, Ventura M, Manca M, Dufresne F (2011) Reticulate evolution of the Daphnia pulex complex as revealed by nuclear markers. Mol Ecol 20(6): 1191-1207.
    • (2011) Mol Ecol , vol.20 , Issue.6 , pp. 1191-1207
    • Vergilino, R.1    Markova, S.2    Ventura, M.3    Manca, M.4    Dufresne, F.5
  • 21
    • 84876371050 scopus 로고    scopus 로고
    • Genomic background and generation time influence deleterious mutation rates in Daphnia
    • Latta LC, 4th, et al. (2013) Genomic background and generation time influence deleterious mutation rates in Daphnia. Genetics 193(2):539-544.
    • (2013) Genetics , vol.193 , Issue.2 , pp. 539-544
    • Latta IV, L.C.1
  • 23
    • 84975795680 scopus 로고    scopus 로고
    • An integrated map of genetic variation from 1,092 human genomes
    • 1001 Genomes Consortium, et al. (2012) An integrated map of genetic variation from 1,092 human genomes. Nature 491(7422):56-65.
    • (2012) Nature , vol.491 , Issue.7422 , pp. 56-65
  • 24
    • 84884618226 scopus 로고    scopus 로고
    • The role of hybridization in the evolution of meiosis suppression in Daphnia
    • in press
    • Xu S, Innes DJ, Lynch M, Cristescu ME (2013) The role of hybridization in the evolution of meiosis suppression in Daphnia. Mol Ecol, in press.
    • (2013) Mol Ecol
    • Xu, S.1    Innes, D.J.2    Lynch, M.3    Cristescu, M.E.4
  • 25
    • 0038523729 scopus 로고    scopus 로고
    • Phylogenetic relationships between parthenogens and their sexual relatives: The possible routes to parthenogenesis in animals
    • Simon JC, Delmotte F, Rispe C, Crease T (2003) Phylogenetic relationships between parthenogens and their sexual relatives: The possible routes to parthenogenesis in animals. Biol J Linn Soc Lond 79:151-163.
    • (2003) Biol J Linn Soc Lond , vol.79 , pp. 151-163
    • Simon, J.C.1    Delmotte, F.2    Rispe, C.3    Crease, T.4
  • 27
    • 33646835562 scopus 로고    scopus 로고
    • Elimination of deleterious mutations in plastid genomes by gene conversion
    • Khakhlova O, Bock R (2006) Elimination of deleterious mutations in plastid genomes by gene conversion. Plant J 46(1):85-94.
    • (2006) Plant J , vol.46 , Issue.1 , pp. 85-94
    • Khakhlova, O.1    Bock, R.2
  • 28
    • 34250680227 scopus 로고    scopus 로고
    • Mitotic recombination counteracts the benefits of genetic segregation
    • Mandegar MA, Otto SP (2007) Mitotic recombination counteracts the benefits of genetic segregation. Proc Biol Sci 274(1615):1301-1307.
    • (2007) Proc Biol Sci , vol.274 , Issue.1615 , pp. 1301-1307
    • Mandegar, M.A.1    Otto, S.P.2
  • 29
    • 4444300816 scopus 로고    scopus 로고
    • Recombination and loss of complementation: A more than twofold cost for parthenogenesis
    • Archetti M (2004) Recombination and loss of complementation: A more than twofold cost for parthenogenesis. J Evol Biol 17(5):1084-1097.
    • (2004) J Evol Biol , vol.17 , Issue.5 , pp. 1084-1097
    • Archetti, M.1
  • 30
    • 77952001877 scopus 로고    scopus 로고
    • Complementation, genetic conflict, and the evolution of sex and recombination
    • Archetti M (2010) Complementation, genetic conflict, and the evolution of sex and recombination. J Hered 101(Suppl 1):S21-S33.
    • (2010) J Hered , vol.101 , Issue.SUPPL. 1
    • Archetti, M.1
  • 31
    • 0030961064 scopus 로고    scopus 로고
    • Inbreeding depression and inferred deleterious-mutation parameters in Daphnia
    • Deng HW, Lynch M (1997) Inbreeding depression and inferred deleterious-mutation parameters in Daphnia. Genetics 147(1):147-155.
    • (1997) Genetics , vol.147 , Issue.1 , pp. 147-155
    • Deng, H.W.1    Lynch, M.2
  • 32
    • 33144483078 scopus 로고    scopus 로고
    • Transitions to asexuality result in excess amino acid substitutions
    • Paland S, Lynch M (2006) Transitions to asexuality result in excess amino acid substitutions. Science 311(5763):990-992.
    • (2006) Science , vol.311 , Issue.5763 , pp. 990-992
    • Paland, S.1    Lynch, M.2
  • 33
    • 84855874848 scopus 로고    scopus 로고
    • High mutation rates in the mitochondrial genomes of Daphnia pulex
    • Xu S, et al. (2012) High mutation rates in the mitochondrial genomes of Daphnia pulex. Mol Biol Evol 29(2):763-769.
    • (2012) Mol Biol Evol , vol.29 , Issue.2 , pp. 763-769
    • Xu, S.1
  • 34
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z (2007) PAML 4: Phylogenetic analysis by maximum likelihood. Mol Biol Evol 24(8):1586-1591.
    • (2007) Mol Biol Evol , vol.24 , Issue.8 , pp. 1586-1591
    • Yang, Z.1
  • 35
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map (SAM) format and SAMtools
    • 1000 Genome Project Data Processing Subgroup
    • Li H, et al.; 1000 Genome Project Data Processing Subgroup (2009) The sequence alignment/map (SAM) format and SAMtools. Bioinformatics 25(16):2078-2079.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1
  • 36
    • 34248669040 scopus 로고    scopus 로고
    • KaKs-Calculator: Calculating Ka and Ks through model selection and model averaging
    • Zhang Z, et al. (2006) KaKs-Calculator: Calculating Ka and Ks through model selection and model averaging. Genomics Proteomics Bioinformatics 4(4):259-263.
    • (2006) Genomics Proteomics Bioinformatics , vol.4 , Issue.4 , pp. 259-263
    • Zhang, Z.1
  • 37
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, et al. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739.
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1
  • 38
    • 0031927077 scopus 로고    scopus 로고
    • Mutation, selection, and the maintenance of life-history variation in a natural population
    • Lynch M, Latta L, Hicks J, Giorgianni M (1998) Mutation, selection, and the maintenance of life-history variation in a natural population. Evolution 52:727-733.
    • (1998) Evolution , vol.52 , pp. 727-733
    • Lynch, M.1    Latta, L.2    Hicks, J.3    Giorgianni, M.4
  • 39
    • 0000677788 scopus 로고
    • Spontaneous mutations for life history characters in an obligate parthenogen
    • Lynch M (1985) Spontaneous mutations for life history characters in an obligate parthenogen. Evolution 39:804-818.
    • (1985) Evolution , vol.39 , pp. 804-818
    • Lynch, M.1


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