-
1
-
-
34249079154
-
Network motifs: Theory and experimental approaches
-
DOI 10.1038/nrg2102, PII NRG2102
-
U. Alon, Nat. Rev. Gen. 10.1038/nrg2102 8, 450 (2007). (Pubitemid 46789247)
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.6
, pp. 450-461
-
-
Alon, U.1
-
2
-
-
32044462728
-
The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli
-
DOI 10.1016/j.jmb.2005.12.003, PII S0022283605015573
-
S. Mangan, S. Itzkovitz, A. Zaslaver, and U. Alon, J. Mol. Biol. JMOBAK 0022-2836 10.1016/j.jmb.2005.12.003 356, 1073 (2006). (Pubitemid 43199913)
-
(2006)
Journal of Molecular Biology
, vol.356
, Issue.5
, pp. 1073-1081
-
-
Mangan, S.1
Itzkovitz, S.2
Zaslaver, A.3
Alon, U.4
-
3
-
-
70449368774
-
-
10.1103/PhysRevE.80.041902
-
T. E. Saunders and M. Howard, Phys. Rev. E 10.1103/PhysRevE.80.041902 80, 041902 (2009).
-
(2009)
Phys. Rev. e
, vol.80
, pp. 041902
-
-
Saunders, T.E.1
Howard, M.2
-
4
-
-
70349924640
-
-
PLEEE8 1539-3755 10.1103/PhysRevE.77.041903
-
E. Emberly, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.77.041903 77, 041903 (2008).
-
(2008)
Phys. Rev. e
, vol.77
, pp. 041903
-
-
Emberly, E.1
-
6
-
-
77950960454
-
-
PLEEE8 1539-3755 10.1103/PhysRevE.81.041905
-
A. M. Walczak, G. Tkačik, and W. Bialek, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.81.041905 81, 041905 (2010).
-
(2010)
Phys. Rev. e
, vol.81
, pp. 041905
-
-
Walczak, A.M.1
Tkačik, G.2
Bialek, W.3
-
9
-
-
50449096238
-
-
PNASA6 0027-8424 10.1073/pnas.0806077105
-
G. Tkačik, C. G. Callan, Jr., and W. Bialek, Proc. Natl. Acad. Sci. (U.S.A.) PNASA6 0027-8424 10.1073/pnas.0806077105 105, 12265 (2008).
-
(2008)
Proc. Natl. Acad. Sci. (U.S.A.)
, vol.105
, pp. 12265
-
-
Tkačik, G.1
Callan, Jr.C.G.2
Bialek, W.3
-
10
-
-
80054841161
-
-
SCIEAS 0036-8075 10.1126/science.1204553
-
R. Cheong, A. Rhee, C. J. Wang, I. Nemenman, and A. Levchenko, Science SCIEAS 0036-8075 10.1126/science.1204553 334, 354 (2011).
-
(2011)
Science
, vol.334
, pp. 354
-
-
Cheong, R.1
Rhee, A.2
Wang, C.J.3
Nemenman, I.4
Levchenko, A.5
-
13
-
-
34250334326
-
Intrinsic fluctuations, robustness, and tunability in signaling cycles
-
DOI 10.1529/biophysj.106.088856
-
J. Levine, H. Y. Kueh, and L. Mirny, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.106.088856 92, 4473 (2007). (Pubitemid 46910561)
-
(2007)
Biophysical Journal
, vol.92
, Issue.12
, pp. 4473-4481
-
-
Levine, J.1
Hao, Y.K.2
Mirny, L.3
-
14
-
-
77955154492
-
-
PRLTAO 0031-9007 10.1103/PhysRevLett.105.058101
-
A. Mugler, A. M. Walczak, and C. H. Wiggins, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.105.058101 105, 058101 (2010).
-
(2010)
Phys. Rev. Lett.
, vol.105
, pp. 058101
-
-
Mugler, A.1
Walczak, A.M.2
Wiggins, C.H.3
-
15
-
-
66349109628
-
-
PRLTAO 0031-9007 10.1103/PhysRevLett.102.218101
-
F. Tostevin and P. R. ten Wolde, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.102.218101 102, 218101 (2009).
-
(2009)
Phys. Rev. Lett.
, vol.102
, pp. 218101
-
-
Tostevin, F.1
Ten Wolde, P.R.2
-
16
-
-
77953665126
-
-
PLEEE8 1539-3755 10.1103/PhysRevE.81.061917
-
F. Tostevin and P. R. ten Wolde, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.81.061917 81, 061917 (2010).
-
(2010)
Phys. Rev. e
, vol.81
, pp. 061917
-
-
Tostevin, F.1
Ten Wolde, P.R.2
-
21
-
-
77953099980
-
-
PNASA6 0027-8424 10.1073/pnas.0911178107
-
D. Fuller, W. Chen, M. Adler, A. Groisman, H. Levine, W.-J. Rappel, and W. F. Loomis, Proc. Natl. Acad. Sci. (U.S.A.) PNASA6 0027-8424 10.1073/pnas.0911178107 107, 9656 (2010).
-
(2010)
Proc. Natl. Acad. Sci. (U.S.A.)
, vol.107
, pp. 9656
-
-
Fuller, D.1
Chen, W.2
Adler, M.3
Groisman, A.4
Levine, H.5
Rappel, W.-J.6
Loomis, W.F.7
-
22
-
-
33646147144
-
-
BIOJAU 0006-3495 10.1529/biophysj.105.073353
-
T. T. Le, T. Emonet, S. Harlepp, C. C. Guet, and P. Cluzel, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.105.073353 90, 3315 (2006).
-
(2006)
Biophys. J.
, vol.90
, pp. 3315
-
-
Le, T.T.1
Emonet, T.2
Harlepp, S.3
Guet, C.C.4
Cluzel, P.5
-
23
-
-
84859626348
-
-
10.1088/1478-3975/9/2/026003
-
I. Nemenman, Phys. Biol. 10.1088/1478-3975/9/2/026003 9, 026003 (2012).
-
(2012)
Phys. Biol.
, vol.9
, pp. 026003
-
-
Nemenman, I.1
-
24
-
-
84940644968
-
-
10.1002/j.1538-7305.1948.tb01338.x
-
C. Shannon, Bell Syst. Tech. J. 10.1002/j.1538-7305.1948.tb01338.x 27, 379 (1948).
-
(1948)
Bell Syst. Tech. J.
, vol.27
, pp. 379
-
-
Shannon, C.1
-
26
-
-
8644290874
-
A chaperone network controls the heat shock response in E. Coli
-
DOI 10.1101/gad.1219204
-
E. Guisbert, C. Herman, C. Z. Lu and C. A. Gross, Genes Dev. GEDEEP 0890-9369 10.1101/gad.1219204 18, 2812 (2004). (Pubitemid 39507773)
-
(2004)
Genes and Development
, vol.18
, Issue.22
, pp. 2812-2821
-
-
Guisbert, E.1
Herman, C.2
Lu, C.Z.3
Gross, C.A.4
-
27
-
-
0842332406
-
Dynamics of the p53-Mdm2 feedback loop in individual cells
-
DOI 10.1038/ng1293
-
G. Lahav, N. Rosenfeld, A. Sigal, N. Geva-Zatorsky, A. J. Levine, M. B. Elowitz, and U. Alon, Nat. Gen. NGENEC 1061-4036 10.1038/ng1293 36, 147 (2004). (Pubitemid 38174372)
-
(2004)
Nature Genetics
, vol.36
, Issue.2
, pp. 147-150
-
-
Lahav, G.1
Rosenfeld, N.2
Sigal, A.3
Geva-Zatorsky, N.4
Levine, A.J.5
Elowitz, M.B.6
Alon, U.7
-
28
-
-
33847112418
-
The NF-κB regulatory network
-
DOI 10.1385/CT:6:2:111, PII CT62111
-
A. R. Brasier, Cardiovasc Toxicol. 1530-7905 10.1385/CT:6:2:111 6, 111 (2006). (Pubitemid 46277550)
-
(2006)
Cardiovascular Toxicology
, vol.6
, Issue.2
, pp. 111-130
-
-
Brasier, A.R.1
-
29
-
-
0038115065
-
The segmentation clock: Converting embryonic time into spatial pattern
-
DOI 10.1126/science.1085887
-
O. Pourquié, Science SCIEAS 0036-8075 10.1126/science.1085887 301, 328 (2003). (Pubitemid 36877057)
-
(2003)
Science
, vol.301
, Issue.5631
, pp. 328-330
-
-
Pourquie, O.1
-
31
-
-
84883858297
-
-
Code that performs the optimization is available at
-
Code that performs the optimization is available at http://infodyn. sourceforge.net.
-
-
-
-
32
-
-
84883893938
-
-
-rt/2(1-2rt).
-
- r t / 2 (1 - 2 r t).
-
-
-
-
33
-
-
84883887390
-
-
0]→1.
-
0] → 1.
-
-
-
-
34
-
-
57049159362
-
A fast, robust and tunable synthetic gene oscillator
-
DOI 10.1038/nature07389, PII NATURE07389
-
J. Stricker, S. Cookson, M. R. Bennett, W. H. Mather, L. S. Tsimring, and J. Hasty, Nature (London) NATUAS 0028-0836 10.1038/nature07389 456, 516 (2008). (Pubitemid 352759003)
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 516-519
-
-
Stricker, J.1
Cookson, S.2
Bennett, M.R.3
Mather, W.H.4
Tsimring, L.S.5
Hasty, J.6
-
36
-
-
0036710512
-
The PTEN, Mdm2, p53 tumor suppressor-oncoprotein network
-
DOI 10.1016/S0968-0004(02)02166-7, PII S0968000402021667
-
L. D. Mayo and D. B. Donner, Trends Biochem. Sci. 0968-0004 10.1016/S0968-0004(02)02166-7 27, 462 (2002). (Pubitemid 35246255)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.9
, pp. 462-467
-
-
Mayo, L.D.1
Donner, D.B.2
-
37
-
-
84883892475
-
-
0] are both one bit.
-
0] are both one bit.
-
-
-
|