메뉴 건너뛰기




Volumn 126, Issue 17, 2013, Pages 3848-3861

Matched miRNA and mRNA signatures from an hESC-based in vitro model of pancreatic differentiation reveal novel regulatory interactions

Author keywords

Beta cell; Gene expression; miRNA; Pancreatic differentiation; Stem cell

Indexed keywords

INSULIN; LUCIFERASE; LUCIFERASE REPORTER; MESSENGER RNA; MICRORNA; MICRORNA 200; MICRORNA 200A; RFX6 PROTEIN; TRANSCRIPTION FACTOR SOX17; UNCLASSIFIED DRUG; ZEB2 PROTEIN;

EID: 84883291103     PISSN: 00219533     EISSN: 14779137     Source Type: Journal    
DOI: 10.1242/jcs.123570     Document Type: Article
Times cited : (42)

References (54)
  • 1
    • 79961173182 scopus 로고    scopus 로고
    • Direct reprogramming of adult human fibroblasts to functional neurons under defined conditions
    • Ambasudhan, R., Talantova, M., Coleman, R., Yuan, X., Zhu, S., Lipton, S. A. and Ding, S. (2011). Direct reprogramming of adult human fibroblasts to functional neurons under defined conditions. Cell Stem Cell 9, 113-118.
    • (2011) Cell Stem Cell , vol.9 , pp. 113-118
    • Ambasudhan, R.1    Talantova, M.2    Coleman, R.3    Yuan, X.4    Zhu, S.5    Lipton, S.A.6    Ding, S.7
  • 2
    • 41649084206 scopus 로고    scopus 로고
    • Pivotal roles for eomesodermin during axis formation, epithelium-to-mesenchyme transition and endoderm specification in the mouse
    • Arnold, S. J., Hofmann, U. K., Bikoff, E. K. and Robertson, E. J. (2008). Pivotal roles for eomesodermin during axis formation, epithelium-to-mesenchyme transition and endoderm specification in the mouse. Development 135, 501-511.
    • (2008) Development , vol.15 , pp. 501-511
    • Arnold, S.J.1    Hofmann, U.K.2    Bikoff, E.K.3    Robertson, E.J.4
  • 4
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Bartel, D. P. (2004). MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116, 281-297.
    • (2004) Cell , vol.16 , pp. 281-297
    • Bartel, D.P.1
  • 5
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: target recognition and regulatory functions
    • Bartel, D. P. (2009). MicroRNAs: target recognition and regulatory functions. Cell 136, 215-233.
    • (2009) Cell , vol.16 , pp. 215-233
    • Bartel, D.P.1
  • 8
    • 44649163918 scopus 로고    scopus 로고
    • A reciprocal repression between ZEB1 and members of the miR- 200 family promotes EMT and invasion in cancer cells
    • Burk, U., Schubert, J., Wellner, U., Schmalhofer, O., Vincan, E., Spaderna, S. and Brabletz, T. (2008). A reciprocal repression between ZEB1 and members of the miR- 200 family promotes EMT and invasion in cancer cells. EMBO Rep. 9, 582-589.
    • (2008) EMBO Rep. , vol.9 , pp. 582-589
    • Burk, U.1    Schubert, J.2    Wellner, U.3    Schmalhofer, O.4    Vincan, E.5    Spaderna, S.6    Brabletz, T.7
  • 11
    • 1642374097 scopus 로고    scopus 로고
    • Specificity of microRNA target selection in translational repression
    • Doench, J. G. and Sharp, P. A. (2004). Specificity of microRNA target selection in translational repression. Genes Dev. 18, 504-511.
    • (2004) Genes Dev. , vol.18 , pp. 504-511
    • Doench, J.G.1    Sharp, P.A.2
  • 13
    • 58149350343 scopus 로고    scopus 로고
    • miR-375 targets 39-phosphoinositide-dependent protein kinase-1 and regulates glucose-induced biological responses in pancreatic beta-cells
    • El Ouaamari, A., Baroukh, N., Martens, G. A., Lebrun, P., Pipeleers, D. and van Obberghen, E. (2008). miR-375 targets 39-phosphoinositide-dependent protein kinase-1 and regulates glucose-induced biological responses in pancreatic beta-cells. Diabetes 57, 2708-2717.
    • (2008) Diabetes , vol.57 , pp. 2708-2717
    • El Ouaamari, A.1    Baroukh, N.2    Martens, G.A.3    Lebrun, P.4    Pipeleers, D.5    Van Obberghen, E.6
  • 16
    • 65649109022 scopus 로고    scopus 로고
    • Stem cells to pancreatic beta-cells: new sources for diabetes cell therapy
    • Guo, T. and Hebrok, M. (2009). Stem cells to pancreatic beta-cells: new sources for diabetes cell therapy. Endocr. Rev. 30, 214-227.
    • (2009) Endocr. Rev. , vol.30 , pp. 214-227
    • Guo, T.1    Hebrok, M.2
  • 21
    • 66149160608 scopus 로고    scopus 로고
    • Embryonic stem cellspecific microRNAs promote induced pluripotency
    • Judson, R. L., Babiarz, J. E., Venere, M. and Blelloch, R. (2009). Embryonic stem cellspecific microRNAs promote induced pluripotency. Nat. Biotechnol. 27, 459-461.
    • (2009) Nat. Biotechnol. , vol.27 , pp. 459-461
    • Judson, R.L.1    Babiarz, J.E.2    Venere, M.3    Blelloch, R.4
  • 25
    • 48449091318 scopus 로고    scopus 로고
    • Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence
    • Laurent,L.C., Chen, J., Ulitsky, I.,Mueller, F. J.,Lu, C., Shamir, R.,Fan, J.B. andLoring, J. F. (2008). Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence. Stem Cells 26, 1506-1516.
    • (2008) Stem Cells , vol.26 , pp. 1506-1516
    • Laurent, L.C.1    Chen, J.2    Ulitsky, I.3    Mueller, F.J.4    Lu, C.5    Shamir, R.6    Fan, J.B.7    Loring, J.F.8
  • 27
  • 28
    • 69249096109 scopus 로고    scopus 로고
    • Up-regulation of miR-200 and let-7 by natural agents leads to the reversal of epithelial-to-mesenchymal transition in gemcitabine-resistant pancreatic cancer cells
    • Li, Y., VandenBoom, T. G., 2nd, Kong, D., Wang, Z., Ali, S., Philip, P. A. and Sarkar, F. H. (2009). Up-regulation of miR-200 and let-7 by natural agents leads to the reversal of epithelial-to-mesenchymal transition in gemcitabine-resistant pancreatic cancer cells. Cancer Res. 69, 6704-6712.
    • (2009) Cancer Res. , vol.69 , pp. 6704-6712
    • Li, Y.1    VandenBoom, T.G.2    Kong, D.3    Wang, Z.4    Ali, S.5    Philip, P.A.6    Sarkar, F.H.7
  • 29
    • 79955755007 scopus 로고    scopus 로고
    • MicroRNA cluster 302-367 enhances somatic cell reprogramming by accelerating a mesenchymal-to-epithelial transition
    • Liao, B., Bao, X., Liu, L., Feng, S., Zovoilis, A., Liu, W., Xue, Y., Cai, J., Guo, X., Qin, B. et al. (2011). MicroRNA cluster 302-367 enhances somatic cell reprogramming by accelerating a mesenchymal-to-epithelial transition. J. Biol. Chem. 286, 17359-17364.
    • (2011) J. Biol. Chem. , vol.286 , pp. 17359-17364
    • Liao, B.1    Bao, X.2    Liu, L.3    Feng, S.4    Zovoilis, A.5    Liu, W.6    Xue, Y.7    Cai, J.8    Guo, X.9    Qin, B.10
  • 30
    • 52949125268 scopus 로고    scopus 로고
    • Mir-302 reprograms human skin cancer cells into a pluripotent ES-celllike state
    • Lin, S. L., Chang, D. C., Chang-Lin, S., Lin, C. H., Wu, D. T., Chen, D. T. and Ying, S. Y. (2008). Mir-302 reprograms human skin cancer cells into a pluripotent ES-celllike state. RNA 14, 2115-2124.
    • (2008) RNA , vol.14 , pp. 2115-2124
    • Lin, S.L.1    Chang, D.C.2    Chang-Lin, S.3    Lin, C.H.4    Wu, D.T.5    Chen, D.T.6    Ying, S.Y.7
  • 31
    • 36248978699 scopus 로고    scopus 로고
    • MicroRNA expression is required for pancreatic islet cell genesis in the mouse
    • Lynn, F. C., Skewes-Cox, P., Kosaka, Y., McManus, M. T., Harfe, B. D. and German, M. S. (2007). MicroRNA expression is required for pancreatic islet cell genesis in the mouse. Diabetes 56, 2938-2945.
    • (2007) Diabetes , vol.56 , pp. 2938-2945
    • Lynn, F.C.1    Skewes-Cox, P.2    Kosaka, Y.3    McManus, M.T.4    Harfe, B.D.5    German, M.S.6
  • 34
    • 79953303915 scopus 로고    scopus 로고
    • MiR-30 family and EMT in human fetal pancreatic islets
    • Ozcan, S. (2009). MiR-30 family and EMT in human fetal pancreatic islets. Islets 1, 283-285.
    • (2009) Islets , vol.1 , pp. 283-285
    • Ozcan, S.1
  • 36
    • 79960322580 scopus 로고    scopus 로고
    • miR-29a and miR-29b contribute to pancreatic beta-cell-specific silencing of monocarboxylate transporter 1 (Mct1)
    • Pullen, T. J., da Silva Xavier, G., Kelsey, G. and Rutter, G. A. (2011). miR-29a and miR-29b contribute to pancreatic beta-cell-specific silencing of monocarboxylate transporter 1 (Mct1). Mol. Cell. Biol. 31, 3182-3194.
    • (2011) Mol. Cell. Biol. , vol.31 , pp. 3182-3194
    • Pullen, T.J.1    Da Silva Xavier, G.2    Kelsey, G.3    Rutter, G.A.4
  • 37
    • 65349090170 scopus 로고    scopus 로고
    • MicroRNA and gene expression patterns in the differentiation of human embryonic stem cells
    • Ren, J., Jin, P., Wang, E., Marincola, F. M. and Stroncek, D. F. (2009). MicroRNA and gene expression patterns in the differentiation of human embryonic stem cells. J. Transl. Med. 7, 20.
    • (2009) J. Transl. Med. , vol.7 , pp. 20
    • Ren, J.1    Jin, P.2    Wang, E.3    Marincola, F.M.4    Stroncek, D.F.5
  • 38
    • 68949169031 scopus 로고    scopus 로고
    • MicroRNA-23b cluster microRNAs regulate transforming growth factor-beta/bone morphogenetic protein signaling and liver stem cell differentiation by targeting Smads
    • Rogler, C. E., Levoci, L., Ader, T., Massimi, A., Tchaikovskaya, T., Norel, R. and Rogler, L. E. (2009). MicroRNA-23b cluster microRNAs regulate transforming growth factor-beta/bone morphogenetic protein signaling and liver stem cell differentiation by targeting Smads. Hepatology 50, 575-584.
    • (2009) Hepatology , vol.50 , pp. 575-584
    • Rogler, C.E.1    Levoci, L.2    Ader, T.3    Massimi, A.4    Tchaikovskaya, T.5    Norel, R.6    Rogler, L.E.7
  • 41
    • 84865328547 scopus 로고    scopus 로고
    • Reexpression of miR-200 by novel approaches regulates the expression of PTEN and MT1-MMP in pancreatic cancer
    • Soubani, O., Ali, A. S., Logna, F., Ali, S., Philip, P. A. and Sarkar, F. H. (2012). Reexpression of miR-200 by novel approaches regulates the expression of PTEN and MT1-MMP in pancreatic cancer. Carcinogenesis 33, 1563-1571.
    • (2012) Carcinogenesis , vol.33 , pp. 1563-1571
    • Soubani, O.1    Ali, A.S.2    Logna, F.3    Ali, S.4    Philip, P.A.5    Sarkar, F.H.6
  • 43
    • 84865402121 scopus 로고    scopus 로고
    • Critical factors for cardiac reprogramming
    • Srivastava, D. and Ieda, M. (2012). Critical factors for cardiac reprogramming. Circ. Res. 111, 5-8.
    • (2012) Circ. Res. , vol.11 , pp. 5-8
    • Srivastava, D.1    Ieda, M.2
  • 44
    • 58249107416 scopus 로고    scopus 로고
    • Identification of glucoseregulated miRNAs from pancreatic beta cells reveals a role for miR-30d in insulin transcription
    • Tang, X., Muniappan, L., Tang, G. and Ozcan, S. (2009). Identification of glucoseregulated miRNAs from pancreatic beta cells reveals a role for miR-30d in insulin transcription. RNA 15, 287-293.
    • (2009) RNA , vol.15 , pp. 287-293
    • Tang, X.1    Muniappan, L.2    Tang, G.3    Ozcan, S.4
  • 45
    • 70349863066 scopus 로고    scopus 로고
    • Derivation of insulinproducing cells from human embryonic stem cells
    • Van Hoof, D., D'Amour, K. A. and German, M. S. (2009). Derivation of insulinproducing cells from human embryonic stem cells. Stem Cell Res. 3, 73-87.
    • (2009) Stem Cell Res. , vol.3 , pp. 73-87
    • Van Hoof, D.1    D'Amour, K.A.2    German, M.S.3
  • 47
    • 56749091922 scopus 로고    scopus 로고
    • Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation
    • Wang, Y., Baskerville, S., Shenoy, A., Babiarz, J. E., Baehner, L. and Blelloch, R. (2008a). Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation. Nat. Genet. 40, 1478-1483.
    • (2008) Nat. Genet. , vol.40 , pp. 1478-1483
    • Wang, Y.1    Baskerville, S.2    Shenoy, A.3    Babiarz, J.E.4    Baehner, L.5    Blelloch, R.6
  • 48
    • 42349106840 scopus 로고    scopus 로고
    • Targeting endoplasmic reticulum stress and Akt with OSU-03012 and gefitinib or erlotinib to overcome resistance to epidermal growth factor receptor inhibitors
    • Wang, Y. C.,Kulp, S.K.,Wang, D., Yang, C. C., Sargeant, A. M., Hung, J. H., Kashida, Y., Yamaguchi, M., Chang, G. D. and Chen, C. S. (2008b). Targeting endoplasmic reticulum stress and Akt with OSU-03012 and gefitinib or erlotinib to overcome resistance to epidermal growth factor receptor inhibitors. Cancer Res. 68, 2820-2830.
    • (2008) Cancer Res. , vol.68 , pp. 2820-2830
    • Wang, Y.C.1    Kulp, S.K.2    Wang, D.3    Yang, C.C.4    Sargeant, A.M.5    Hung, J.H.6    Kashida, Y.7    Yamaguchi, M.8    Chang, G.D.9    Chen, C.S.10
  • 49
    • 0034705104 scopus 로고    scopus 로고
    • Expression profiling of pancreatic beta cells: glucose regulation of secretory and metabolic pathway genes
    • Webb, G. C., Akbar, M. S., Zhao, C. and Steiner, D. F. (2000). Expression profiling of pancreatic beta cells: glucose regulation of secretory and metabolic pathway genes. Proc. Natl. Acad. Sci. USA 97, 5773-5778.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 5773-5778
    • Webb, G.C.1    Akbar, M.S.2    Zhao, C.3    Steiner, D.F.4
  • 51
    • 84873702810 scopus 로고    scopus 로고
    • Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells
    • Xie, R., Everett, L. J., Lim, H. W., Patel, N. A., Schug, J., Kroon, E., Kelly, O. G., Wang, A., D'Amour, K. A., Robins, A. J. et al. (2013). Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells. Cell Stem Cell 12, 224-237.
    • (2013) Cell Stem Cell , vol.12 , pp. 224-237
    • Xie, R.1    Everett, L.J.2    Lim, H.W.3    Patel, N.A.4    Schug, J.5    Kroon, E.6    Kelly, O.G.7    Wang, A.8    D'Amour, K.A.9    Robins, A.J.10
  • 52
    • 77953950190 scopus 로고    scopus 로고
    • MicroRNA, hsa-miR-200c, is an independent prognostic factor in pancreatic cancer and its upregulation inhibits pancreatic cancer invasion but increases cell proliferation
    • Yu, J., Ohuchida, K., Mizumoto, K., Sato, N., Kayashima, T., Fujita, H., Nakata, K. and Tanaka, M. (2010). MicroRNA, hsa-miR-200c, is an independent prognostic factor in pancreatic cancer and its upregulation inhibits pancreatic cancer invasion but increases cell proliferation. Mol. Cancer 9, 169.
    • (2010) Mol. Cancer , vol.9 , pp. 169
    • Yu, J.1    Ohuchida, K.2    Mizumoto, K.3    Sato, N.4    Kayashima, T.5    Fujita, H.6    Nakata, K.7    Tanaka, M.8
  • 53
    • 53349178722 scopus 로고    scopus 로고
    • In vivo reprogramming of adult pancreatic exocrine cells to beta-cells
    • Zhou, Q., Brown, J., Kanarek, A., Rajagopal, J. and Melton, D. A. (2008). In vivo reprogramming of adult pancreatic exocrine cells to beta-cells. Nature 455, 627-632.
    • (2008) Nature , vol.455 , pp. 627-632
    • Zhou, Q.1    Brown, J.2    Kanarek, A.3    Rajagopal, J.4    Melton, D.A.5
  • 54
    • 67349233035 scopus 로고    scopus 로고
    • Differential expression profile of microRNAs in human placentas from preeclamptic pregnancies vs normal pregnancies
    • Zhu, X. M., Han, T., Sargent, I. L., Yin, G. W. and Yao, Y. Q. (2009). Differential expression profile of microRNAs in human placentas from preeclamptic pregnancies vs normal pregnancies. Am. J. Obstet. Gynecol. 200, 661.e1-661.e7.
    • (2009) Am. J. Obstet. Gynecol. , vol.200
    • Zhu, X.M.1    Han, T.2    Sargent, I.L.3    Yin, G.W.4    Yao, Y.Q.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.