-
1
-
-
0028877134
-
Calcium and bacteria
-
10.1016/S0065-2911(08)60144-7 1:CAS:528:DyaK28Xht1Cmurc%3D
-
RJ Smith 1995 Calcium and bacteria Advances in Microbial Physiology 37 83 133 10.1016/S0065-2911(08)60144-7 1:CAS:528:DyaK28Xht1Cmurc%3D
-
(1995)
Advances in Microbial Physiology
, vol.37
, pp. 83-133
-
-
Smith, R.J.1
-
3
-
-
0037293103
-
Relation between domain evolution, specificity, and taxonomy of the α-amylase family members containing a C-terminal starch-binding domain
-
10.1046/j.1432-1033.2003.03404.x 1:CAS:528:DC%2BD3sXhslCru7k%3D
-
S Janecek B Svensson EA MacGregor 2003 Relation between domain evolution, specificity, and taxonomy of the α-amylase family members containing a C-terminal starch-binding domain European Journal of Biochemistry 270 635 645 10.1046/j.1432-1033.2003.03404.x 1:CAS:528:DC%2BD3sXhslCru7k%3D
-
(2003)
European Journal of Biochemistry
, vol.270
, pp. 635-645
-
-
Janecek, S.1
Svensson, B.2
Macgregor, E.A.3
-
4
-
-
0037900194
-
Engineering the thermostability of Bacillus licheniformis α-amylase
-
10.1093/proeng/gzg032 1:CAS:528:DC%2BD3sXjslWhu7c%3D
-
N Declerck M Machius P Joyet G Wiegand R Huber C Gaillardin 2003 Engineering the thermostability of Bacillus licheniformis α-amylase Protein Engineering 16 287 293 10.1093/proeng/gzg032 1:CAS:528: DC%2BD3sXjslWhu7c%3D
-
(2003)
Protein Engineering
, vol.16
, pp. 287-293
-
-
Declerck, N.1
Machius, M.2
Joyet, P.3
Wiegand, G.4
Huber, R.5
Gaillardin, C.6
-
5
-
-
41149087373
-
Evolution of binding sites for zinc and calcium ions playing structural roles
-
10.1002/prot.21741 1:CAS:528:DC%2BD1cXkt1amtbs%3D
-
JW Torrance MW MacArthur JM Thornton 2008 Evolution of binding sites for zinc and calcium ions playing structural roles Proteins 71 813 830 10.1002/prot.21741 1:CAS:528:DC%2BD1cXkt1amtbs%3D
-
(2008)
Proteins
, vol.71
, pp. 813-830
-
-
Torrance, J.W.1
Macarthur, M.W.2
Thornton, J.M.3
-
6
-
-
77952877282
-
Engineering of a bacillus α-amylase with improved thermostability and calcium independency
-
10.1007/s12010-009-8879-2 1:CAS:528:DC%2BC3cXmvFCms7o%3D
-
M Ghollasi K Khajeh H Naderi-Manesh A Ghasemi 2010 Engineering of a bacillus α-amylase with improved thermostability and calcium independency Applied Biochemistry and Biotechnology 162 444 459 10.1007/s12010-009-8879-2 1:CAS:528:DC%2BC3cXmvFCms7o%3D
-
(2010)
Applied Biochemistry and Biotechnology
, vol.162
, pp. 444-459
-
-
Ghollasi, M.1
Khajeh, K.2
Naderi-Manesh, H.3
Ghasemi, A.4
-
7
-
-
0030764655
-
Calcium protects a mesophilic xylanase from proteinase inactivation and thermal unfolding
-
10.1074/jbc.272.28.17523 1:CAS:528:DyaK2sXksFyhtLg%3D
-
TD Spurway C Morland A Cooper I Sumner GP Hazlewood AG O'Donnell RW Pickersgill HJ Gilbert 1997 Calcium protects a mesophilic xylanase from proteinase inactivation and thermal unfolding Journal of Biological Chemistry 272 17523 17530 10.1074/jbc.272.28.17523 1:CAS:528:DyaK2sXksFyhtLg%3D
-
(1997)
Journal of Biological Chemistry
, vol.272
, pp. 17523-17530
-
-
Spurway, T.D.1
Morland, C.2
Cooper, A.3
Sumner, I.4
Hazlewood, G.P.5
O'Donnell, A.G.6
Pickersgill, R.W.7
Gilbert, H.J.8
-
8
-
-
33750046332
-
Prediction of EF-hand calcium-binding proteins and analysis of bacterial EF-hand proteins
-
10.1002/prot.21139 1:CAS:528:DC%2BD28XhtFWqt7bI
-
Y Zhou W Yang M Kirberger HW Lee G Ayalasomayajula JJ Yang 2006 Prediction of EF-hand calcium-binding proteins and analysis of bacterial EF-hand proteins Proteins 65 643 655 10.1002/prot.21139 1:CAS:528:DC%2BD28XhtFWqt7bI
-
(2006)
Proteins
, vol.65
, pp. 643-655
-
-
Zhou, Y.1
Yang, W.2
Kirberger, M.3
Lee, H.W.4
Ayalasomayajula, G.5
Yang, J.J.6
-
9
-
-
74849092594
-
Prediction of calcium-binding sites by combining loop-modeling with machine learning
-
10.1186/1472-6807-9-72
-
T Liu RB Altman 2009 Prediction of calcium-binding sites by combining loop-modeling with machine learning BMC Structural Biology 9 72 10.1186/1472-6807-9-72
-
(2009)
BMC Structural Biology
, vol.9
, pp. 72
-
-
Liu, T.1
Altman, R.B.2
-
10
-
-
79959603758
-
New structural and functional contexts of the Dx[DN]xDG linear motif: Insights into evolution of calcium-binding proteins
-
10.1371/journal.pone.0021507 1:CAS:528:DC%2BC3MXot1yrsLw%3D
-
DJ Rigden DD Woodhead PW Wong MY Galperin 2011 New structural and functional contexts of the Dx[DN]xDG linear motif: Insights into evolution of calcium-binding proteins PLoS One 6 6 e21507 10.1371/journal.pone.0021507 1:CAS:528:DC%2BC3MXot1yrsLw%3D
-
(2011)
PLoS One
, vol.6
, Issue.6
, pp. 21507
-
-
Rigden, D.J.1
Woodhead, D.D.2
Wong, P.W.3
Galperin, M.Y.4
-
11
-
-
5144226338
-
The DxDxDG motif for calcium binding: Multiple structural contexts and implications for evolution
-
10.1016/j.jmb.2004.08.077 1:CAS:528:DC%2BD2cXotlClur8%3D
-
DJ Rigden MY Galperin 2004 The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution Journal of Molecular Biology 343 971 984 10.1016/j.jmb.2004.08.077 1:CAS:528:DC%2BD2cXotlClur8%3D
-
(2004)
Journal of Molecular Biology
, vol.343
, pp. 971-984
-
-
Rigden, D.J.1
Galperin, M.Y.2
-
12
-
-
0343471377
-
Modification of a PCR-based site-directed mutagenesis method
-
570-1
-
CL Fisher GK Pei 1997 Modification of a PCR-based site-directed mutagenesis method BioTechniques 23 570-1 574
-
(1997)
BioTechniques
, vol.23
, pp. 574
-
-
Fisher, C.L.1
Pei, G.K.2
-
13
-
-
0003903343
-
-
3 Cold Spring Harbor New York Sambrook, J. & Russell, D. W. (2001). Molecular cloning: A laboratory manual (3rd ed.). New York: Cold Spring Harbor
-
J Sambrook DW Russell 2001 Molecular cloning: A laboratory manual 3 Cold Spring Harbor New York Sambrook, J., & Russell, D. W. (2001). Molecular cloning: A laboratory manual (3rd ed.). New York: Cold Spring Harbor.
-
(2001)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Russell, D.W.2
-
14
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
-
MM Bradford 1976 A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Analytical Biochemistry 72 248 254 10.1016/0003-2697(76)90527-3 1:CAS:528:DyaE28XksVehtrY%3D
-
(1976)
Analytical Biochemistry
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
15
-
-
0030065282
-
Binding and aggregation of human mu-calpain by terbium ion
-
10.1016/0167-4838(95)00170-0
-
KJ Raser M Buroker-Kilgore KK Wang 1996 Binding and aggregation of human mu-calpain by terbium ion Biochimica et Biophysica Acta 1292 9 14 10.1016/0167-4838(95)00170-0
-
(1996)
Biochimica et Biophysica Acta
, vol.1292
, pp. 9-14
-
-
Raser, K.J.1
Buroker-Kilgore, M.2
Wang, K.K.3
-
16
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
10.1038/227680a0 1:CAS:528:DC%2BD3MXlsFags7s%3D
-
UK Laemmli 1970 Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 680 685 10.1038/227680a0 1:CAS:528:DC%2BD3MXlsFags7s%3D
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
17
-
-
33747333106
-
Use of dinitrosalicylic acid reagent for determination of reducing sugar
-
10.1021/ac60147a030 1:CAS:528:DyaG1MXmtFKiuw%3D%3D
-
GL Miller 1959 Use of dinitrosalicylic acid reagent for determination of reducing sugar Analytical Chemistry 31 426 428 10.1021/ac60147a030 1:CAS:528:DyaG1MXmtFKiuw%3D%3D
-
(1959)
Analytical Chemistry
, vol.31
, pp. 426-428
-
-
Miller, G.L.1
-
18
-
-
0031213640
-
Repetin (Rptn), a new member of the "fused gene" subgroup within the S100 gene family encoding a murine epidermal differentiation protein
-
10.1006/geno.1997.4818 1:CAS:528:DyaK2sXlsFeks7k%3D
-
P Krieg M Schuppler R Koesters A Mincheva P Lichter F Marks 1997 Repetin (Rptn), a new member of the "fused gene" subgroup within the S100 gene family encoding a murine epidermal differentiation protein Genomics 43 339 348 10.1006/geno.1997.4818 1:CAS:528:DyaK2sXlsFeks7k%3D
-
(1997)
Genomics
, vol.43
, pp. 339-348
-
-
Krieg, P.1
Schuppler, M.2
Koesters, R.3
Mincheva, A.4
Lichter, P.5
Marks, F.6
-
19
-
-
57349146948
-
Differences and similarities in enzymes from the neopullulanase subfamily isolated from thermophilic species
-
10.2478/s11756-008-0171-3 1:CAS:528:DC%2BD1MXjvVWitbo%3D
-
E Nordberg Karlsson A Labes P Turner OH Fridjohnsson C Wennerberg T Pozzo GO Hreggvidson JK Kristjansson P Schönheit 2008 Differences and similarities in enzymes from the neopullulanase subfamily isolated from thermophilic species Biologia 63 1006 1014 10.2478/s11756-008-0171-3 1:CAS:528:DC%2BD1MXjvVWitbo%3D
-
(2008)
Biologia
, vol.63
, pp. 1006-1014
-
-
Nordberg Karlsson, E.1
Labes, A.2
Turner, P.3
Fridjohnsson, O.H.4
Wennerberg, C.5
Pozzo, T.6
Hreggvidson, G.O.7
Kristjansson, J.K.8
Schönheit, P.9
-
20
-
-
0142011998
-
Structural diversity of calcium-binding proteins in bacteria: Single handed EF-hands?
-
10.1016/S0966-842X(03)00153-7 1:CAS:528:DC%2BD3sXls1Cjurg%3D
-
DJ Rigden MJ Jedrzejas OV Moroz MY Galperin 2003 Structural diversity of calcium-binding proteins in bacteria: single handed EF-hands? Trends in Microbiology 11 295 297 10.1016/S0966-842X(03)00153-7 1:CAS:528: DC%2BD3sXls1Cjurg%3D
-
(2003)
Trends in Microbiology
, vol.11
, pp. 295-297
-
-
Rigden, D.J.1
Jedrzejas, M.J.2
Moroz, O.V.3
Galperin, M.Y.4
-
21
-
-
0023256886
-
A novel calcium binding site in the galactose-binding protein of bacterial transport and chemotaxis
-
10.1038/327635a0 1:CAS:528:DyaL2sXkvFahsLY%3D
-
NK Vyas MN Vyas FA Quiocho 1987 A novel calcium binding site in the galactose-binding protein of bacterial transport and chemotaxis Nature 327 635 638 10.1038/327635a0 1:CAS:528:DyaL2sXkvFahsLY%3D
-
(1987)
Nature
, vol.327
, pp. 635-638
-
-
Vyas, N.K.1
Vyas, M.N.2
Quiocho, F.A.3
-
22
-
-
0037097003
-
Calcium-binding parameter of Bacillus amyloliquefaciens alpha-amylase determined by inactivation kinetics
-
10.1042/BJ20011436
-
A Tanaka E Hoshino 2002 Calcium-binding parameter of Bacillus amyloliquefaciens alpha-amylase determined by inactivation kinetics Biochemical Journal 15 635 639 10.1042/BJ20011436
-
(2002)
Biochemical Journal
, vol.15
, pp. 635-639
-
-
Tanaka, A.1
Hoshino, E.2
-
23
-
-
0041384407
-
Temperature adaptation of proteins: Engineering mesophilic-like activity and stability in a cold-adapted alpha-amylase
-
10.1016/j.jmb.2003.07.014
-
S D'Amico C Gerday G Feller 2003 Temperature adaptation of proteins: Engineering mesophilic-like activity and stability in a cold-adapted alpha-amylase Journal of Molecular Biology 332 5 981 988 10.1016/j.jmb.2003.07. 014
-
(2003)
Journal of Molecular Biology
, vol.332
, Issue.5
, pp. 981-988
-
-
D'Amico, S.1
Gerday, C.2
Feller, G.3
-
24
-
-
0003013656
-
Alpha amylase as calcium-metalloenzymes II. Calcium and the catalytic activity
-
10.1021/bi00889a011 1:CAS:528:DyaF2cXisVKjsA%3D%3D
-
J Hsiu EH Fischer EA Stein 1964 Alpha amylase as calcium-metalloenzymes II. Calcium and the catalytic activity Biochemistry 3 61 66 10.1021/bi00889a011 1:CAS:528:DyaF2cXisVKjsA%3D%3D
-
(1964)
Biochemistry
, vol.3
, pp. 61-66
-
-
Hsiu, J.1
Fischer, E.H.2
Stein, E.A.3
-
25
-
-
0035021231
-
Prokaryotic calmodulins: Recent developments and evolutionary implications
-
1:CAS:528:DC%2BD3MXjsVynu7w%3D
-
K Yang 2001 Prokaryotic calmodulins: Recent developments and evolutionary implications Journal of Molecular Microbiology and Biotechnology 3 457 459 1:CAS:528:DC%2BD3MXjsVynu7w%3D
-
(2001)
Journal of Molecular Microbiology and Biotechnology
, vol.3
, pp. 457-459
-
-
Yang, K.1
-
26
-
-
33646937406
-
Single-molecule fluorescence studies of protein folding and conformational dynamics
-
10.1021/cr0404343 1:CAS:528:DC%2BD28XjslKlurw%3D
-
X Michalet S Weiss M Jäger 2006 Single-molecule fluorescence studies of protein folding and conformational dynamics Chemical Reviews 106 1785 1813 10.1021/cr0404343 1:CAS:528:DC%2BD28XjslKlurw%3D
-
(2006)
Chemical Reviews
, vol.106
, pp. 1785-1813
-
-
Michalet, X.1
Weiss, S.2
Jäger, M.3
-
27
-
-
33646918845
-
Probing protein folding and conformational transitions with fluorescence
-
10.1021/cr0404390 1:CAS:528:DC%2BD28XjslKlur0%3D
-
CA Royer 2006 Probing protein folding and conformational transitions with fluorescence Chemical Reviews 106 1769 1784 10.1021/cr0404390 1:CAS:528:DC%2BD28XjslKlur0%3D
-
(2006)
Chemical Reviews
, vol.106
, pp. 1769-1784
-
-
Royer, C.A.1
-
28
-
-
16344378407
-
Flexibility of metal binding sites in proteins on a database scale
-
10.1002/prot.20431 1:CAS:528:DC%2BD2MXkslyqu7c%3D
-
M Babor HM Greenblatt M Edelman V Sobolev 2005 Flexibility of metal binding sites in proteins on a database scale Proteins 59 221 230 10.1002/prot.20431 1:CAS:528:DC%2BD2MXkslyqu7c%3D
-
(2005)
Proteins
, vol.59
, pp. 221-230
-
-
Babor, M.1
Greenblatt, H.M.2
Edelman, M.3
Sobolev, V.4
-
29
-
-
24344438293
-
Structural and dynamical features contributing to thermostability in alpha-amylases
-
10.1007/s00018-005-5079-2 1:CAS:528:DC%2BD2MXhtFCgsr3F
-
J Fitter 2005 Structural and dynamical features contributing to thermostability in alpha-amylases Cellular and Molecular Life Sciences 62 1925 1937 10.1007/s00018-005-5079-2 1:CAS:528:DC%2BD2MXhtFCgsr3F
-
(2005)
Cellular and Molecular Life Sciences
, vol.62
, pp. 1925-1937
-
-
Fitter, J.1
-
31
-
-
41549167593
-
Engineering of a truncated alpha-amylase of Bacillus sp. TS-23 for the simultaneous improvement of thermal and oxidative stabilities, and mutational analysis of the proposed calcium-binding aspartates
-
10.1016/j.procbio.2008.01.020 1:CAS:528:DC%2BD1cXktlGhsrk%3D
-
LL Lin CC Huang HF Lo 2008 Engineering of a truncated alpha-amylase of Bacillus sp. TS-23 for the simultaneous improvement of thermal and oxidative stabilities, and mutational analysis of the proposed calcium-binding aspartates Process Biochemistry 43 559 565 10.1016/j.procbio.2008.01.020 1:CAS:528:DC%2BD1cXktlGhsrk%3D
-
(2008)
Process Biochemistry
, vol.43
, pp. 559-565
-
-
Lin, L.L.1
Huang, C.C.2
Lo, H.F.3
-
32
-
-
76949095649
-
Role of the calcium-binding residues Asp231, Asp233, and Asp438 in alpha-amylase of Bacillus amyloliquefaciens as revealed by mutational analysis
-
10.1007/s00284-009-9517-5 1:CAS:528:DC%2BC3cXhsFGjtbg%3D
-
Y Liu W Shen GY Shi ZX Wang 2010 Role of the calcium-binding residues Asp231, Asp233, and Asp438 in alpha-amylase of Bacillus amyloliquefaciens as revealed by mutational analysis Current Microbiology 60 3 162 166 10.1007/s00284-009-9517-5 1:CAS:528:DC%2BC3cXhsFGjtbg%3D
-
(2010)
Current Microbiology
, vol.60
, Issue.3
, pp. 162-166
-
-
Liu, Y.1
Shen, W.2
Shi, G.Y.3
Wang, Z.X.4
-
33
-
-
0030859541
-
Agonists induce conformational changes in transmembrane domains III and VI of the adrenoceptor
-
10.1093/emboj/16.22.6737 1:CAS:528:DyaK1cXisVWmuw%3D%3D
-
U Gether S Lin P Ghanouni JA Ballesteros H Weinstein BK Kobilka 1997 Agonists induce conformational changes in transmembrane domains III and VI of the adrenoceptor EMBO Journal 16 6737 6747 10.1093/emboj/16.22.6737 1:CAS:528:DyaK1cXisVWmuw%3D%3D
-
(1997)
EMBO Journal
, vol.16
, pp. 6737-6747
-
-
Gether, U.1
Lin, S.2
Ghanouni, P.3
Ballesteros, J.A.4
Weinstein, H.5
Kobilka, B.K.6
|