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Volumn 25, Issue 7, 2013, Pages 2522-2535

Evolution of C4 photosynthesis in the genus flaveria: Establishment of a photorespiratory CO2 pump

Author keywords

[No Author keywords available]

Indexed keywords

FLAVERIA;

EID: 84883196211     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.113.114520     Document Type: Article
Times cited : (73)

References (75)
  • 2
    • 78650967150 scopus 로고    scopus 로고
    • 4 photosynthesis
    • In A.S. Raghavendra and R.F. Sage, eds (Dordrecht, The Netherlands: Springer)
    • 2 Concentrating Mechanisms, A.S. Raghavendra and R.F. Sage, eds (Dordrecht, The Netherlands: Springer), pp. 81-108.
    • (2011) 2 Concentrating Mechanisms , pp. 81-108
    • Bauwe, H.1
  • 3
    • 0028841898 scopus 로고
    • Structure and expression analysis of the gdcsPA and gdcsPB genes encoding two P-isoproteins of the glycine-cleavage system from Flaveria pringlei
    • Bauwe, H., Chu, C.C., Kopriva, S., and Nan, Q. (1995). Structure and expression analysis of the gdcsPA and gdcsPB genes encoding two P-isoproteins of the glycine-cleavage system from Flaveria pringlei. Eur. J. Biochem. 234: 116-124.
    • (1995) Eur. J. Biochem. , vol.234 , pp. 116-124
    • Bauwe, H.1    Chu, C.C.2    Kopriva, S.3    Nan, Q.4
  • 4
    • 0029249494 scopus 로고
    • The gdcsPA gene from Flaveria pringlei (Asteraceae)
    • Bauwe, H., and Kopriva, S. (1995). The gdcsPA gene from Flaveria pringlei (Asteraceae). Plant Physiol. 107: 655.
    • (1995) Plant Physiol. , vol.107 , pp. 655
    • Bauwe, H.1    Kopriva, S.2
  • 5
    • 84862018035 scopus 로고    scopus 로고
    • Reference genome sequence of the model plant Setaria
    • Bennetzen, J.L., et al. (2012). Reference genome sequence of the model plant Setaria. Nat. Biotechnol. 30: 555-561.
    • (2012) Nat. Biotechnol. , vol.30 , pp. 555-561
    • Bennetzen, J.L.1
  • 6
    • 0021771482 scopus 로고
    • Binary Agrobacterium vectors for plant transformation
    • Bevan, M. (1984). Binary Agrobacterium vectors for plant transformation. Nucleic Acids Res. 12: 8711-8721.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 8711-8721
    • Bevan, M.1
  • 7
    • 59649124310 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay (NMD) mechanisms
    • Brogna, S., and Wen, J. (2009). Nonsense-mediated mRNA decay (NMD) mechanisms. Nat. Struct. Mol. Biol. 16: 107-113.
    • (2009) Nat. Struct. Mol. Biol. , vol.16 , pp. 107-113
    • Brogna, S.1    Wen, J.2
  • 9
    • 0037649050 scopus 로고    scopus 로고
    • Complete sequence of the binary vector pBI121 and its application in cloning T-DNA insertion from transgenic plants
    • Chen, P.Y., Wang, C.K., Soong, S.C., and To, K.Y. (2003). Complete sequence of the binary vector pBI121 and its application in cloning T-DNA insertion from transgenic plants. Mol. Breed. 11: 287-293.
    • (2003) Mol. Breed. , vol.11 , pp. 287-293
    • Chen, P.Y.1    Wang, C.K.2    Soong, S.C.3    To, K.Y.4
  • 13
    • 0003873652 scopus 로고    scopus 로고
    • PhD dissertation (Halle-Wittenberg, Germany: Martin-Luther University)
    • 4. PhD dissertation (Halle-Wittenberg, Germany: Martin-Luther University).
    • (1996) 4.
    • Chu, C.1
  • 14
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J., and Bent, A.F. (1998). Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
    • (1998) Plant J. , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 15
    • 0031606649 scopus 로고    scopus 로고
    • The electronic Plant Gene Register
    • Cossu, R., and Bauwe, H. (1998). The electronic Plant Gene Register. Plant Physiol. 116: 445-446.
    • (1998) Plant Physiol. , vol.116 , pp. 445-446
    • Cossu, R.1    Bauwe, H.2
  • 16
    • 0001985163 scopus 로고    scopus 로고
    • 4 plants
    • In R.F. Sage and R.K. Monson, eds (San Diego, CA: Academic Press)
    • 4 Plant Biology, R.F. Sage and R.K. Monson, eds (San Diego, CA: Academic Press), pp. 133-172.
    • (1999) 4 Plant Biology , pp. 133-172
    • Dengler, N.G.1    Nelson, T.2
  • 17
    • 77951803690 scopus 로고    scopus 로고
    • 4 grasslands: Integrating evolutionary and ecosystem science
    • 4 grasslands: Integrating evolutionary and ecosystem science. Science 328: 587-591.
    • (2010) Science , vol.328 , pp. 587-591
    • Edwards, E.J.1
  • 18
    • 0000034292 scopus 로고
    • 4 intermediates
    • In M.D. Hatch and N.K. Boardman, eds (New York: Academic Press)
    • 4 intermediates. In The Biochemistry of Plants, M.D. Hatch and N.K. Boardman, eds (New York: Academic Press), pp. 275-325.
    • (1987) The Biochemistry of Plants , pp. 275-325
    • Edwards, G.1    Ku, M.2
  • 21
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 22
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    • Goff, S.A., et al. (2002). A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296: 92-100.
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1
  • 27
    • 45949125175 scopus 로고
    • 4 photosynthesis: A unique blend of modified biochemistry, anatomy and ultrastructure
    • 4 photosynthesis: A unique blend of modified biochemistry, anatomy and ultrastructure. Biochim. Biophys. Acta 895: 81-106.
    • (1987) Biochim. Biophys. Acta , vol.895 , pp. 81-106
    • Hatch, M.D.1
  • 28
    • 48749139170 scopus 로고
    • 4 type leaf anatomy in grasses (Poaceae). Mesophyll: Bundle sheath area ratios
    • 4 type leaf anatomy in grasses (Poaceae). Mesophyll: Bundle sheath area ratios. Ann. Bot. (Lond.) 53: 163-180.
    • (1984) Ann. Bot. (Lond.) , vol.53 , pp. 163-180
    • Hattersley, P.W.1
  • 31
    • 0024234855 scopus 로고
    • CLUSTAL: A package for performing multiple sequence alignment on a microcomputer
    • Higgins, D.G., and Sharp, P.M. (1988). CLUSTAL: A package for performing multiple sequence alignment on a microcomputer. Gene 73: 237-244.
    • (1988) Gene , vol.73 , pp. 237-244
    • Higgins, D.G.1    Sharp, P.M.2
  • 32
    • 0024598146 scopus 로고
    • Fast and sensitive multiple sequence alignments on a microcomputer
    • Higgins, D.G., and Sharp, P.M. (1989). Fast and sensitive multiple sequence alignments on a microcomputer. Comput. Appl. Biosci. 5: 151-153.
    • (1989) Comput. Appl. Biosci. , vol.5 , pp. 151-153
    • Higgins, D.G.1    Sharp, P.M.2
  • 33
    • 0018897826 scopus 로고
    • The functional organization of the nopaline A. Tumefaciens plasmid pTiC58
    • Holsters, M., et al. (1980). The functional organization of the nopaline A. tumefaciens plasmid pTiC58. Plasmid 3: 212-230.
    • (1980) Plasmid , vol.3 , pp. 212-230
    • Holsters, M.1
  • 34
    • 0022917028 scopus 로고
    • The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA
    • Hood, E.E., Helmer, G.L., Fraley, R.T., and Chilton, M.D. (1986). The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA. J. Bacteriol. 168: 1291-1301.
    • (1986) J. Bacteriol. , vol.168 , pp. 1291-1301
    • Hood, E.E.1    Helmer, G.L.2    Fraley, R.T.3    Chilton, M.D.4
  • 35
    • 34547659870 scopus 로고    scopus 로고
    • Context analysis of termination codons in mRNA that are recognized by plant NMD
    • Hori, K., andWatanabe, Y. (2007). Context analysis of termination codons in mRNA that are recognized by plant NMD. Plant Cell Physiol. 48: 1072-1078.
    • (2007) Plant Cell Physiol. , vol.48 , pp. 1072-1078
    • Hori, K.1    Watanabe, Y.2
  • 36
    • 0342444416 scopus 로고
    • GUS fusions: Beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants
    • Jefferson, R.A., Kavanagh, T.A., and Bevan, M.W. (1987). GUS fusions: Beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6: 3901-3907.
    • (1987) EMBO J. , vol.6 , pp. 3901-3907
    • Jefferson, R.A.1    Kavanagh, T.A.2    Bevan, M.W.3
  • 37
    • 33845622065 scopus 로고    scopus 로고
    • Both introns and long 39-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants
    • Kertesz, S., Kerenyi, Z., Merai, Z., Bartos, I., Palfy, T., Barta, E., and Silhavy, D. (2006). Both introns and long 39-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants. Nucleic Acids Res. 34: 6147-6157.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 6147-6157
    • Kertesz, S.1    Kerenyi, Z.2    Merai, Z.3    Bartos, I.4    Palfy, T.5    Barta, E.6    Silhavy, D.7
  • 38
    • 0001200134 scopus 로고
    • The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimaeric genes carried by a novel type of Agrobacterium binary vector
    • Koncz, C., and Schell, J. (1986). The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimaeric genes carried by a novel type of Agrobacterium binary vector. Mol. Gen. Genet. 204: 383-396.
    • (1986) Mol. Gen. Genet. , vol.204 , pp. 383-396
    • Koncz, C.1    Schell, J.2
  • 39
    • 0028399291 scopus 로고
    • P-protein of glycine decarboxylase from Flaveria pringlei
    • Kopriva, S., and Bauwe, H. (1994). P-protein of glycine decarboxylase from Flaveria pringlei. Plant Physiol. 104: 1077-1078.
    • (1994) Plant Physiol. , vol.104 , pp. 1077-1078
    • Kopriva, S.1    Bauwe, H.2
  • 40
    • 12644318799 scopus 로고    scopus 로고
    • Molecular phylogeny of Flaveria as deduced from the analysis of nucleotide sequences encoding the H-protein of the glycine cleavage system
    • Kopriva, S., Chu, C.C., and Bauwe, H. (1996). Molecular phylogeny of Flaveria as deduced from the analysis of nucleotide sequences encoding the H-protein of the glycine cleavage system. Plant Cell Environ. 19: 1028-1036.
    • (1996) Plant Cell Environ. , vol.19 , pp. 1028-1036
    • Kopriva, S.1    Chu, C.C.2    Bauwe, H.3
  • 41
    • 0000256965 scopus 로고
    • An improved assay for beta-glucuronidase in transformed cells: Methanol almost completely suppresses a putative endogenous beta-glucuronidase activity
    • Kosugi, S., Ohashi, Y., Nakajima, K., and Arai, Y. (1990). An improved assay for beta-glucuronidase in transformed cells: Methanol almost completely suppresses a putative endogenous beta-glucuronidase activity. Plant Sci. 70: 133-140.
    • (1990) Plant Sci. , vol.70 , pp. 133-140
    • Kosugi, S.1    Ohashi, Y.2    Nakajima, K.3    Arai, Y.4
  • 42
    • 36448991500 scopus 로고    scopus 로고
    • Clustal W and Clustal X version 2.0
    • Larkin, M.A., et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
    • (2007) Bioinformatics , vol.23 , pp. 2947-2948
    • Larkin, M.A.1
  • 43
    • 0026344773 scopus 로고
    • A DNA transformationcompetent Arabidopsis genomic library in Agrobacterium
    • Lazo, G.R., Stein, P.A., and Ludwig, R.A. (1991). A DNA transformationcompetent Arabidopsis genomic library in Agrobacterium. Biotechnology (NY) 9: 963-967.
    • (1991) Biotechnology (NY) , vol.9 , pp. 963-967
    • Lazo, G.R.1    Stein, P.A.2    Ludwig, R.A.3
  • 44
    • 79955795581 scopus 로고    scopus 로고
    • Paused RNA polymerase II as a developmental checkpoint
    • Levine, M. (2011). Paused RNA polymerase II as a developmental checkpoint. Cell 145: 502-511.
    • (2011) Cell , vol.145 , pp. 502-511
    • Levine, M.1
  • 45
    • 78649488563 scopus 로고    scopus 로고
    • The developmental dynamics of the maize leaf transcriptome
    • Li, P., et al. (2010). The developmental dynamics of the maize leaf transcriptome. Nat. Genet. 42: 1060-1067.
    • (2010) Nat. Genet. , vol.42 , pp. 1060-1067
    • Li, P.1
  • 46
    • 38349138023 scopus 로고    scopus 로고
    • An improved method for preparing Agrobacterium cells that simplifies the Arabidopsis transformation protocol
    • Logemann, E., Birkenbihl, R.P., Ulker, B., and Somssich, I.E. (2006). An improved method for preparing Agrobacterium cells that simplifies the Arabidopsis transformation protocol. Plant Methods 2: 16.
    • (2006) Plant Methods , vol.2 , pp. 16
    • Logemann, E.1    Birkenbihl, R.P.2    Ulker, B.3    Somssich, I.E.4
  • 50
    • 79551575062 scopus 로고    scopus 로고
    • Synthetic biology: A bridge between functional and evolutionary biology
    • Morange, M. (2009). Synthetic biology: A bridge between functional and evolutionary biology. Biol. Theory 4: 368-377.
    • (2009) Biol. Theory , vol.4 , pp. 368-377
    • Morange, M.1
  • 52
    • 0032945593 scopus 로고    scopus 로고
    • DIALIGN 2: Improvement of the segment-tosegment approach to multiple sequence alignment
    • Morgenstern, B. (1999). DIALIGN 2: Improvement of the segment-tosegment approach to multiple sequence alignment. Bioinformatics 15: 211-218.
    • (1999) Bioinformatics , vol.15 , pp. 211-218
    • Morgenstern, B.1
  • 53
    • 0029861894 scopus 로고    scopus 로고
    • Multiple DNA and protein sequence alignment based on segment-to-segment comparison
    • Morgenstern, B., Dress, A., and Werner, T. (1996). Multiple DNA and protein sequence alignment based on segment-to-segment comparison. Proc. Natl. Acad. Sci. USA 93: 12098-12103.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 12098-12103
    • Morgenstern, B.1    Dress, A.2    Werner, T.3
  • 54
    • 0031854952 scopus 로고    scopus 로고
    • DIALIGN: Finding local similarities by multiple sequence alignment
    • Morgenstern, B., Frech, K., Dress, A., and Werner, T. (1998). DIALIGN: Finding local similarities by multiple sequence alignment. Bioinformatics 14: 290-294.
    • (1998) Bioinformatics , vol.14 , pp. 290-294
    • Morgenstern, B.1    Frech, K.2    Dress, A.3    Werner, T.4
  • 56
    • 17744418982 scopus 로고
    • Mutants d'Escherichia coli K 12 affectés pour leur croissance sur méthyl-b-D-glucuronide: Localisation du gène de structure de la b-D-glucuronidase (uid A)
    • Novel, G., and Novel, M. (1973). Mutants d'Escherichia coli K 12 affectés pour leur croissance sur méthyl-b-D-glucuronide: Localisation du gène de structure de la b-D-glucuronidase (uid A). Mol. Gen. Genet. 120: 319-335.
    • (1973) Mol. Gen. Genet. , vol.120 , pp. 319-335
    • Novel, G.1    Novel, M.2
  • 57
    • 0000443883 scopus 로고
    • Photorespiration-Pathways, regulation, and modification
    • Ogren, W.L. (1984). Photorespiration-Pathways, regulation, and modification. Annu. Rev. Plant Physiol. Plant Mol. Biol. 35: 415-442.
    • (1984) Annu. Rev. Plant Physiol. Plant Mol. Biol. , vol.35 , pp. 415-442
    • Ogren, W.L.1
  • 58
    • 0015246690 scopus 로고
    • Ribulose diphosphate carboxylase regulates soybean photorespiration
    • Ogren, W.L., and Bowes, G. (1971). Ribulose diphosphate carboxylase regulates soybean photorespiration. Nat. New Biol. 230: 159-160.
    • (1971) Nat. New Biol. , vol.230 , pp. 159-160
    • Ogren, W.L.1    Bowes, G.2
  • 59
    • 0028860495 scopus 로고
    • Glycine decarboxylase: Protein chemistry and molecular biology of the major protein in leaf mitochondria
    • Oliver, D.J., and Raman, R. (1995). Glycine decarboxylase: Protein chemistry and molecular biology of the major protein in leaf mitochondria. J. Bioenerg. Biomembr. 27: 407-414.
    • (1995) J. Bioenerg. Biomembr. , vol.27 , pp. 407-414
    • Oliver, D.J.1    Raman, R.2
  • 60
    • 79952261920 scopus 로고    scopus 로고
    • Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors
    • Palmer, A.C., Egan, J.B., and Shearwin, K.E. (2011). Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors. Transcription 2: 9-14.
    • (2011) Transcription , vol.2 , pp. 9-14
    • Palmer, A.C.1    Egan, J.B.2    Shearwin, K.E.3
  • 61
    • 58449137410 scopus 로고    scopus 로고
    • The Sorghum bicolor genome and the diversification of grasses
    • Paterson, A.H., et al. (2009). The Sorghum bicolor genome and the diversification of grasses. Nature 457: 551-556.
    • (2009) Nature , vol.457 , pp. 551-556
    • Paterson, A.H.1
  • 62
    • 0000154132 scopus 로고
    • Systematics of Flaveria (Flaveriinae-Asteraceae)
    • Powell, A. (1978). Systematics of Flaveria (Flaveriinae-Asteraceae). Ann. Mo. Bot. Gard. 65: 590-636.
    • (1978) Ann. Mo. Bot. Gard. , vol.65 , pp. 590-636
    • Powell, A.1
  • 64
    • 1642547063 scopus 로고    scopus 로고
    • 4 photosynthesis
    • 4 photosynthesis. New Phytol. 161: 341-370.
    • (2004) New Phytol. , vol.161 , pp. 341-370
    • Sage, R.F.1
  • 67
    • 70450202132 scopus 로고    scopus 로고
    • The B73 maize genome: Complexity, diversity, and dynamics
    • Schnable, P.S., et al. (2009). The B73 maize genome: Complexity, diversity, and dynamics. Science 326: 1112-1115.
    • (2009) Science , vol.326 , pp. 1112-1115
    • Schnable, P.S.1
  • 68
    • 19444377759 scopus 로고    scopus 로고
    • Transcriptional interference-A crash course
    • Shearwin, K.E., Callen, B.P., and Egan, J.B. (2005). Transcriptional interference-A crash course. Trends Genet. 21: 339-345.
    • (2005) Trends Genet. , vol.21 , pp. 339-345
    • Shearwin, K.E.1    Callen, B.P.2    Egan, J.B.3
  • 71
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28: 2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 72
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997). The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


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