Transcriptome analysis of polyamine overproducers reveals activation of plant stress responses and related signalling pathways tolerance in plants

Omics and Plant Abiotic Stress Tolerance

Volumn , Issue , 2011, Pages 82-90

  Marco, F ^a,d   Altabella, T ^b   Alcazar R ^c   Cuevas, J ^b   Bortolotti, C ^b   Gonzalez M E ^c   Ruiz, O A ^c   Tiburcio, A F ^b   Carrasco, P ^d  

^a FUNDACIÓN CENTRO DE ESTUDIOS AMBIENTALES DEL MEDITERRÁNEO CEAM   (Spain)

^b UNIVERSITY OF BARCELONA   (Spain)

^c INSTITUTO DE INVESTIGACIONES BIOTECNOLÓGICAS   (Argentina)

^d UNIVERSITY OF VALENCIA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84882677335     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.2174/978160805058111101010082     Document Type: Chapter

References (47)

1. Alcázar R et al. Involvement of polyamines in plant response to abiotic stress. Biotechnol Lett 2006; 28: 1867-1876.
2. Bouchereau A, Aziz A, Larher F, Martin-Tanguy J. Polyamines and environmental challenges: recent development. Plant Sci 1999; 140: 103-125.
3. Flores HE. In: Slocum R, Flores HE Eds. The biochemistry and physiology of polyamines in plants. Changes in polyamine metabolism in response to abiotic stress. Boca de Raton FL, CRC Press, 1991.
4. Borrell A, Carbonell L, Farrás R, Puig-Parellada P, Tiburcio AF. Polyamines inhibit lipid peroxidation in senescing oat leaves. Physiol Plant 1997; 99: 385-390.
5. Marco F, Carrasco, P. Expresion of the pea S-adenosylmethionine decarboxylase gene is involved in developmental and environmental responses. Planta 2002; 214: 641-647.
6. Groppa MD, Benavides MP, Tomaro ML. Polyamine metabolism in sunflower and wheat leaf discs under cadmium or copper stress. Plant Science 2003; 164: 293-299.
7. Ferrando A, Carrasco P, Cuevas JC, Altabella T, Tiburcio AF. In: Amâncio S, Stulen I Eds. Nitrogen acquisition and assimilation in higher plants. Integrated molecular analysis of the polyamine metabolic pathway in abiotic stress signalling. Kluwer Academic Publishers, The Netherlands, 2004; pp. 207-230.
8. Kusano T, Berberich T, Tateda C, Takahashi Y. Polyamines: essential factors for growth and survival. Planta 2008; 228: 367-381.
9. Gill SS, Tuteja N. Polyamines and abiotic stress tolerance in plants. Plant Signal Behav 2010; 7: 5(1). PMID: 20023386.
10. Alcázar R et al. Polyamines: molecules with regulatory functions in plant abiotic stress tolerance. Planta 2010; doi: 10.1007/s00425-010-1130-0.
11. The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000; 408: 796-815.
12. Watson MW, Malmberg RL. Regulation of Arabidopsis thaliana (L.) Heynh Arginine Decarboxylase by Potassium Deficiency Stress Plant Physiol 1996; 111: 1077-1083.
13. Watson MW, Yu W, Galloway GL, Malmberg RL. Isolation and Characterization of a Second Arginine Decarboxylase cDNA from Arabidopsis (Accession No AF009647) Plant Physiol 1997; 114: 1569.
14. Janowitz T, Kneifel H, Piotrowski M. Identification and characterization of plant agmatine iminohydrolase, the last missing link in polyamine biosynthesis of plants. FEBS Lett 2003; 544: 258-261.
15. Piotrowski M, Janowitz T, Kneifel H. Plant C-N hydrolase and the identification of plant N-carbamoylputrescine amidohydrolase involved in polyamine biosynthesis. J Biol Chem 2003; 278: 1708-1712.
16. Hanzawa Y, Imai A, Michael AJ, Komeda Y, Takahashi T. Characterization of the spermidine synthase-related gene family in Arabidopsis thaliana. FEBS Lett 2002; 527: 176-180.
17. Panicot M et al. A polyamine metabolon involving aminopropyl transferases complexes in Arabidopsis. Plant Cell 2002; 14: 2539-2551.
18. Urano K et al. Characterization of Arabidopsis genes involved in biosynthesis of polyamines in abiotic stress responses and developmental stages. Plant Cell Environ 2003; 26: 1917-1926.
19. Toufighi K, Brady SM, Austin R, Ly E, Provart NJ. The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses. Plant J 2005; 43: 153-163.
20. Alcázar R, Cuevas JC, Patrón M, Altabella T, Tiburcio AF. Abscisic acid modulates polyamine metabolism under water stress in Arabidopsis thaliana. Physiol Plant 2006; 128: 448-455.
21. Urano K et al. Characterization of Arabidopsis genes involved in biosynthesis of polyamines in abiotic stress responses and developmental stages. Plant Cell Environ 2003; 26: 1917-1926.
22. Cuevas JC et al. Putrescine is involved in Arabidopsis freezing tolerance and cold acclimation by regulating abscisic acid levels in response to low temperature. Plant Physiol 2008; 148: 1094-1105.
23. Cuevas JC et al. Putrescine as a signal to modulate the indispensable ABA increase under cold stress. Plant Signal Behav 2009; 4: 219-220.
24. Alcázar R, García-Martínez JL, Cuevas JC, Tiburcio AF, Altabella T. Overexpression of ADC2 in Arabidopsis induces dwarfism and late-flowering through GA deficiency. Plant J 2005; 43: 425-436.
25. Altabella T, Tiburcio AF, Ferrando. Plant with resistance to low temperature and method of production thereof. Spanish patent application 2009; WO2010/004070.
26. Alcázar R et al. Putrescine accumulation confers drought tolerance in transgenic Arabidopsis plants overexpressing the homologous Arginine decarboxylase 2 gene. Plant Physiol Biochem 2010; doi: 10.1016/j.plphy.2010.02.002.
27. Urano K, Yoshiba Y, Nanjo T, Ito T, Yamaguchi-Shinozaki K, Shinozaki K. Arabidopsis stress-inducible gene for arginine decarboxylase AtADC2 is required for accumulation of putrescine in salt tolerance. Biochem Biophys Res Commun 2004; 313: 369-375.
28. Carmona-Saez P, Chagoyen M, Tirado F, Carazo JM, Pascual-Montano A. GENECODIS: A web-based tool for finding significant concurrent annotations in gene lists. Genome Biol 2007; 8(1): R3.
29. Nogales-Cadenas R et al. GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information. Nucleic Acids Res (2009); doi: 10.1093/nar/gkp416.
30. Thimm O et al. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J 2004; 37(6): 914-39.
31. Usadel B et al. Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. Plant Physiol 2005; 138: 1195-204.
32. Yamaguchi K et al. The polyamine spermine protects against high salt stress in Arabidopsis thaliana. FEBS Lett 2006; 580: 783-6788.
33. Yamaguchi K et al. A protective role for the polyamine spermine against drought stress in Arabidopsis. Biochem Biophys Res Commun 2007; 352: 86-490.
34. Tusher V, Tibshirani R, and Chu G. Significance analysis of microarrays applied to transcriptional responses to ionizing radiation. Proc Natl Acad Sci USA 2001; 98: 5116-5121.
35. Igarashi K, Kashiwagi K. Polyamine Modulon in Escherichia coli: genes involved in the stimulation of cell growth by polyamines. J Biochem 2006; 139(1): 11-6.
36. Terui Y et al. Enhancement of the synthesis of RpoN, Cra, and H-NS by polyamines at the level of translation in Escherichia coli cultured with glucose and glutamate. J Bacteriol 2007; 189: 2359-2368.
37. Uemura T, Higashi K, Takigawa M, Toida T, Kashiwagi K, Igarashi K. Polyamine modulon in yeast-Stimulation of COX4 synthesis by spermidine at the level of translation. Int J Biochem Cell Biol 2009; 41(12): 2538-45.
38. Torrigiani P et al. Polyamine synthesis and accumulation in the hypersensitive response to TMV in Nicotiana tabacum. New Phytol 1997; 135: 467-473.
39. Marini F, Betti L, Scaramagli S, Biodi S, Torrigiani P. Polyamine metabolism is up-regulated in response to tobacco mosaic virus in hypersensitive, but not in susceptible, tobacco. New Phytol 2001;149: 301-309.
40. Yamakawa H, Kamada H, Satoh M, Ohashi Y. Spermine is a salicylate-independent endogenous inducer for both tobacco acidic pathogenesis-related proteins and resistance against Tobacco mosaic virus infection. Plant Physiol 1998; 118: 213-1222.
41. Takahashi Y, Berberich T, Miyazaki A, Seo S, Ohashi Y, Kusano T. Spermine signalling in tobacco: activation of mitogen-activated protein kinases by spermine is mediated through mitochondrial dysfunction. Plant J 2003; 36: 820-829.
42. Takahashi Y et al. A subset of the hypersensitive response marker genes including HSR203J is downstream target of a spermine-signal transduction pathway in tobacco. Plant J 2004; 40: 586-595.
43. Uehara Y et al. Tobacco ZFT1, a transcriptional repressor with a Cys2/His2 type zinc-finger motif that functions in spermine-signaling pathway. Plant Mol Biol 2005; 59: 435-448.
44. Mitsuya Y et al. Identification of a novel Cys2/His2-type zinc-finger protein as a component of a spermine-signaling pathway in tobacco. J Plant Physiol 2007; 164: 785-793.
45. Marina M et al. Apoplastic polyamine oxidation plays different roles in local responses of tobacco to infection by the necrotrophic fungus Sclerotinia sclerotiorum and the biotrophic bacterium Pseudomonas viridiflava. Plant Physiol 2008, 147: 2164-2178.
46. Mitsuya Y et al. Spermine signaling plays a significant role in the defense response of Arabidopsis thaliana to cucumber mosaic virus. J Plant Physiol 2009; 166(6): 626-43.
47. Iwata Y, Koizumi N. An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants. Proc Natl Acad Sci USA 2005; 102: 5280-5.