Characterization of the LTR retrotransposon repertoire of a plant clade of six diploid and one tetraploid species

Plant Journal

Volumn 75, Issue 4, 2013, Pages 699-709

  Piednoël, Mathieu ^a   Carrete Vega, Greta ^a   Renner, Susanne S ^a  

^a UNIVERSITY OF MUNICH   (Germany)

Author keywords

genome downsizing; LTR retrotransposons; next generation sequencing; Orobanchaceae; Orobanche; Phelipanche; polyploidy; transposable elements; Ty1 Copia; Ty3 Gypsy

Indexed keywords

LTR RETROTRANSPOSONS; NEXT-GENERATION SEQUENCING; OROBANCHACEAE; OROBANCHE; PHELIPANCHE; POLYPLOIDY; TRANSPOSABLE ELEMENTS; TY1/COPIA; TY3/GYPSY;

BIOLOGY;

PLANTS (BOTANY);

LINDENBERGIA PHILIPPENSIS; MAGNOLIOPHYTA; OROBANCHACEAE; OROBANCHE; OROBANCHE CRENATA; OROBANCHE GRACILIS; PHELIPANCHE; PHELIPANCHE LAVANDULACEA; PHELIPANCHE RAMOSA;

PLANT DNA;

ARTICLE; CHEMISTRY; DIPLOIDY; DNA SEQUENCE; GENETICS; GENOME DOWNSIZING; HIGH THROUGHPUT SEQUENCING; LONG TERMINAL REPEAT; LTR RETROTRANSPOSONS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NEXT-GENERATION SEQUENCING; NUCLEOTIDE SEQUENCE; OROBANCHACEAE; OROBANCHE; PHELIPANCHE; PHYLOGENY; PLANT GENOME; POLYPLOIDY; RETROPOSON; SPECIES DIFFERENCE; TETRAPLOIDY; TRANSPOSABLE ELEMENTS; TY1/COPIA; TY3/GYPSY;

GENOME DOWNSIZING; LTR RETROTRANSPOSONS; NEXT-GENERATION SEQUENCING; OROBANCHACEAE; OROBANCHE; PHELIPANCHE; POLYPLOIDY; TRANSPOSABLE ELEMENTS; TY1/COPIA; TY3/GYPSY;

DIPLOIDY; DNA, PLANT; EVOLUTION, MOLECULAR; GENOME, PLANT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MOLECULAR SEQUENCE DATA; OROBANCHACEAE; PHYLOGENY; RETROELEMENTS; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY; TERMINAL REPEAT SEQUENCES; TETRAPLOIDY;

EID: 84882455889     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12233     Document Type: Article

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