Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication

Genome Biology

Volumn 10, Issue 10, 2009, Pages

  Mun, Jeong Hwan ^a   Kwon, Soo Jin ^a   Yang, Tae Jin ^b   Seol, Young Joo ^a   Jin, Mina ^a   Kim, Jin A ^a   Lim, Myung Ho ^a   Kim, Jung Sun ^a   Baek, Seunghoon ^a   Choi, Beom Soon ^b   Yu, Hee Ju ^c   Kim, Dae Soo ^d   Kim, Namshin ^d   Lim, Ki Byung ^e   Lee, Soo In ^a   Hahn, Jang Ho ^a   Lim, Yong Pyo ^f   Bancroft, Ian ^g   Park, Beom Seok ^a  

^a National Institute of Animal Science   (South Korea)

^b Seoul National University   (South Korea)

^c Rural Development Administration   (South Korea)

^d Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^e Kyungpook National University   (South Korea)

^f Chungnam National University   (South Korea)

^g JOHN INNES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTIG MAPPING; CONTROLLED STUDY; DIPLOIDY; GENE DUPLICATION; GENE REARRANGEMENT; GENE SEQUENCE; GENOME ANALYSIS; GENOMICS; MOLECULAR EVOLUTION; NONHUMAN; PLANT GENOME; POLYPLOIDY; SYNTENY; TRANSPOSON; TURNIP; ARABIDOPSIS; BACTERIAL ARTIFICIAL CHROMOSOME; BIOLOGY; COMPARATIVE STUDY; DUPLICATE GENE; GENETICS; KARYOTYPING; NUCLEOTIDE REPEAT; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PLANT CHROMOSOME;

ARABIDOPSIS; BRASSICA; BRASSICA RAPA;

ARABIDOPSIS; BASE SEQUENCE; BRASSICA RAPA; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CHROMOSOMES, PLANT; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; CONTIG MAPPING; EVOLUTION, MOLECULAR; GENE DUPLICATION; GENE REARRANGEMENT; GENES, DUPLICATE; GENOME, PLANT; KARYOTYPING; OPEN READING FRAMES; PHYLOGENY; POLYPLOIDY; REPETITIVE SEQUENCES, NUCLEIC ACID; SYNTENY;

EID: 71349085860     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2009-10-10-r111     Document Type: Article

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