메뉴 건너뛰기




Volumn 8, Issue 8, 2013, Pages

Evolution and Taxonomic Classification of Alphapapillomavirus 7 Complete Genomes: HPV18, HPV39, HPV45, HPV59, HPV68 and HPV70

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ALPHAPAPILLOMAVIRUS; ARTICLE; BAYES THEOREM; CONTROLLED STUDY; FEMALE; GENE SEQUENCE; GENETIC HETEROGENEITY; GENETIC VARIABILITY; HUMAN; HUMAN PAPILLOMAVIRUS TYPE 18; HUMAN PAPILLOMAVIRUS TYPE 39; HUMAN PAPILLOMAVIRUS TYPE 45; HUMAN PAPILLOMAVIRUS TYPE 59; HUMAN PAPILLOMAVIRUS TYPE 68; HUMAN PAPILLOMAVIRUS TYPE 70; MOLECULAR EVOLUTION; NONHUMAN; OPEN READING FRAME; PHYLOGENY; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; TAXONOMY; UTERINE CERVIX; VIRUS CLASSIFICATION; VIRUS GENOME; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; PAPILLOMA VIRUS;

EID: 84881598218     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0072565     Document Type: Article
Times cited : (53)

References (57)
  • 1
    • 84876565033 scopus 로고    scopus 로고
    • Human papillomavirus infection and the multistage carcinogenesis of cervical cancer
    • doi: 10.1158/1055-9965.EPI-12-1406
    • Schiffman M, Wentzensen N, (2013) Human papillomavirus infection and the multistage carcinogenesis of cervical cancer. Cancer Epidemiol Biomarkers Prev 22: 553-560. doi:10.1158/1055-9965.EPI-12-1406. PubMed: 23549399.
    • (2013) Cancer Epidemiol Biomarkers Prev , vol.22 , pp. 553-560
    • Schiffman, M.1    Wentzensen, N.2
  • 3
    • 84875321843 scopus 로고    scopus 로고
    • Global burden of human papillomavirus and related diseases
    • doi: 10.1016/j.vaccine.2012.07.055
    • Forman D, de Martel C, Lacey CJ, Soerjomataram I, Lortet-Tieulent J, et al. (2012) Global burden of human papillomavirus and related diseases. Vaccine 30 (Suppl 5):: F12-F23. doi:10.1016/j.vaccine.2012.07.055. PubMed: 23199955.
    • (2012) Vaccine , vol.30 , Issue.SUPPL. 5
    • Forman, D.1    de Martel, C.2    Lacey, C.J.3    Soerjomataram, I.4    Lortet-Tieulent, J.5
  • 4
    • 77950938389 scopus 로고    scopus 로고
    • Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
    • doi: 10.1016/j.virol.2010.02.002
    • Bernard HU, Burk RD, Chen Z, van Doorslaer K, Hausen H, et al. (2010) Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Virology 401: 70-79. doi:10.1016/j.virol.2010.02.002. PubMed: 20206957.
    • (2010) Virology , vol.401 , pp. 70-79
    • Bernard, H.U.1    Burk, R.D.2    Chen, Z.3    van Doorslaer, K.4    Hausen, H.5
  • 6
    • 0037421589 scopus 로고    scopus 로고
    • Epidemiologic classification of human papillomavirus types associated with cervical cancer
    • doi: 10.1056/NEJMoa021641
    • Muñoz N, Bosch FX, de Sanjosé S, Herrero R, Castellsagué X, et al. (2003) Epidemiologic classification of human papillomavirus types associated with cervical cancer. N Engl J Med 348: 518-527. doi:10.1056/NEJMoa021641. PubMed: 12571259.
    • (2003) N Engl J Med , vol.348 , pp. 518-527
    • Muñoz, N.1    Bosch, F.X.2    de Sanjosé, S.3    Herrero, R.4    Castellsagué, X.5
  • 7
    • 78650629202 scopus 로고    scopus 로고
    • Human papillomavirus type distribution in 30,848 invasive cervical cancers worldwide: Variation by geographical region, histological type and year of publication
    • doi: 10.1002/ijc.25396
    • Li N, Franceschi S, Howell-Jones R, Snijders PJ, Clifford GM, (2011) Human papillomavirus type distribution in 30,848 invasive cervical cancers worldwide: Variation by geographical region, histological type and year of publication. Int J Cancer J Int Cancer 128: 927-935. doi:10.1002/ijc.25396. PubMed: 20473886.
    • (2011) Int J Cancer J Int Cancer , vol.128 , pp. 927-935
    • Li, N.1    Franceschi, S.2    Howell-Jones, R.3    Snijders, P.J.4    Clifford, G.M.5
  • 8
    • 34250818010 scopus 로고    scopus 로고
    • Human papillomavirus type distribution in invasive cervical cancer and high-grade cervical lesions: a meta-analysis update
    • doi: 10.1002/ijc.22527
    • Smith JS, Lindsay L, Hoots B, Keys J, Franceschi S, et al. (2007) Human papillomavirus type distribution in invasive cervical cancer and high-grade cervical lesions: a meta-analysis update. Int J Cancer 121: 621-632. doi:10.1002/ijc.22527. PubMed: 17405118.
    • (2007) Int J Cancer , vol.121 , pp. 621-632
    • Smith, J.S.1    Lindsay, L.2    Hoots, B.3    Keys, J.4    Franceschi, S.5
  • 10
    • 83755178892 scopus 로고    scopus 로고
    • Classification and nomenclature system for Human Alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages
    • PubMed: 22131111
    • Burk RD, Chen Z, Harari A, Smith BC, Kocjan BJ, et al. (2011) Classification and nomenclature system for Human Alphapapillomavirus variants: general features, nucleotide landmarks and assignment of HPV6 and HPV11 isolates to variant lineages. Acta Dermatovenerol Alp Panonica Adriat 20: 113-123 PubMed: 22131111.
    • (2011) Acta Dermatovenerol Alp Panonica Adriat , vol.20 , pp. 113-123
    • Burk, R.D.1    Chen, Z.2    Harari, A.3    Smith, B.C.4    Kocjan, B.J.5
  • 11
    • 79959563617 scopus 로고    scopus 로고
    • Sequence imputation of HPV16 genomes for genetic association studies
    • doi: 10.1371/journal.pone.0021375
    • Smith B, Chen Z, Reimers L, van Doorslaer K, Schiffman M, et al. (2011) Sequence imputation of HPV16 genomes for genetic association studies. PLOS ONE 6: e21375. doi:10.1371/journal.pone.0021375. PubMed: 21731721.
    • (2011) PLOS ONE , vol.6
    • Smith, B.1    Chen, Z.2    Reimers, L.3    van Doorslaer, K.4    Schiffman, M.5
  • 12
    • 79957584490 scopus 로고    scopus 로고
    • volution Taxonomic Classifications Hum Papillomavirus 16(: HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67
    • Chen Z, Schiffman M, Herrero R, Desalle R, Anastos K, et al. (2011). volution Taxonomic Classifications Hum Papillomavirus 16(: HPV16)-related variant genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. PLoS ONE 6: e20183.
    • (2011) PLoS ONE , vol.6
    • Chen, Z.1    Schiffman, M.2    Herrero, R.3    Desalle, R.4    Anastos, K.5
  • 13
    • 0027442128 scopus 로고
    • The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations
    • PubMed: 8411343
    • Ho L, Chan SY, Burk RD, Das BC, Fujinaga K, et al. (1993) The genetic drift of human papillomavirus type 16 is a means of reconstructing prehistoric viral spread and the movement of ancient human populations. J Virol 67: 6413-6423. PubMed: 8411343.
    • (1993) J Virol , vol.67 , pp. 6413-6423
    • Ho, L.1    Chan, S.Y.2    Burk, R.D.3    Das, B.C.4    Fujinaga, K.5
  • 14
    • 0027376056 scopus 로고
    • Evolution of human papillomavirus type 18: an ancient phylogenetic root in Africa and intratype diversity reflect coevolution with human ethnic groups
    • PubMed: 8411344
    • Ong CK, Chan SY, Campo MS, Fujinaga K, Mavromara-Nazos P, et al. (1993) Evolution of human papillomavirus type 18: an ancient phylogenetic root in Africa and intratype diversity reflect coevolution with human ethnic groups. J Virol 67: 6424-6431. PubMed: 8411344.
    • (1993) J Virol , vol.67 , pp. 6424-6431
    • Ong, C.K.1    Chan, S.Y.2    Campo, M.S.3    Fujinaga, K.4    Mavromara-Nazos, P.5
  • 15
    • 84872612850 scopus 로고    scopus 로고
    • HPV16 genetic variation and the development of cervical cancer worldwide
    • doi: 10.1038/bjc.2012.508
    • Cornet I, Gheit T, Iannacone MR, Vignat J, Sylla BS, et al. (2013) HPV16 genetic variation and the development of cervical cancer worldwide. Br J Cancer 108: 240-244. doi:10.1038/bjc.2012.508. PubMed: 23169278.
    • (2013) Br J Cancer , vol.108 , pp. 240-244
    • Cornet, I.1    Gheit, T.2    Iannacone, M.R.3    Vignat, J.4    Sylla, B.S.5
  • 16
    • 84875598264 scopus 로고    scopus 로고
    • Geographical distribution and oncogenic risk association of human papillomavirus type 58 E6 and E7 sequence variations
    • doi: 10.1002/ijc.27932
    • Chan PK, Zhang C, Park JS, Smith-McCune KK, Palefsky JM, et al. (2013) Geographical distribution and oncogenic risk association of human papillomavirus type 58 E6 and E7 sequence variations. Int J Cancer 132: 2528-2536. doi:10.1002/ijc.27932. PubMed: 23136059.
    • (2013) Int J Cancer , vol.132 , pp. 2528-2536
    • Chan, P.K.1    Zhang, C.2    Park, J.S.3    Smith-McCune, K.K.4    Palefsky, J.M.5
  • 17
    • 18744391386 scopus 로고    scopus 로고
    • Diversifying selection in human papillomavirus type 16 lineages based on complete genome analyses
    • doi: 10.1128/JVI.79.11.7014-7023.2005
    • Chen Z, Terai M, Fu L, Herrero R, DeSalle R, et al. (2005) Diversifying selection in human papillomavirus type 16 lineages based on complete genome analyses. J Virol 79: 7014-7023. doi:10.1128/JVI.79.11.7014-7023.2005. PubMed: 15890941.
    • (2005) J Virol , vol.79 , pp. 7014-7023
    • Chen, Z.1    Terai, M.2    Fu, L.3    Herrero, R.4    DeSalle, R.5
  • 18
    • 59749083343 scopus 로고    scopus 로고
    • Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97
    • doi: 10.1128/JVI.02068-08
    • Chen Z, DeSalle R, Schiffman M, Herrero R, Burk RD, (2009) Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97. J Virol 83: 1443-1455. doi:10.1128/JVI.02068-08. PubMed: 19036820.
    • (2009) J Virol , vol.83 , pp. 1443-1455
    • Chen, Z.1    DeSalle, R.2    Schiffman, M.3    Herrero, R.4    Burk, R.D.5
  • 19
    • 20644460585 scopus 로고    scopus 로고
    • Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1 regions
    • doi: 10.1016/j.virol.2005.04.022
    • Arias-Pulido H, Peyton CL, Torrez-Martínez N, Anderson DN, Wheeler CM, (2005) Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1 regions. Virology 338: 22-34. doi:10.1016/j.virol.2005.04.022. PubMed: 15936050.
    • (2005) Virology , vol.338 , pp. 22-34
    • Arias-Pulido, H.1    Peyton, C.L.2    Torrez-Martínez, N.3    Anderson, D.N.4    Wheeler, C.M.5
  • 20
    • 84870344500 scopus 로고    scopus 로고
    • Differential presence of Papillomavirus variants in cervical cancer: an analysis for HPV33, HPV45 and HPV58
    • doi: 10.1016/j.meegid.2012.09.011
    • Godínez JM, Heideman DA, Gheit T, Alemany L, Snijders PJ, et al. (2013) Differential presence of Papillomavirus variants in cervical cancer: an analysis for HPV33, HPV45 and HPV58. Infect Genet Evol 13: 96-104. doi:10.1016/j.meegid.2012.09.011. PubMed: 23022714.
    • (2013) Infect Genet Evol , vol.13 , pp. 96-104
    • Godínez, J.M.1    Heideman, D.A.2    Gheit, T.3    Alemany, L.4    Snijders, P.J.5
  • 21
    • 78650747895 scopus 로고    scopus 로고
    • Epidemiological and clinical consequences of within-host evolution
    • doi: 10.1016/j.tim.2010.09.005
    • Alizon S, Luciani F, Regoes RR, (2011) Epidemiological and clinical consequences of within-host evolution. Trends Microbiol 19: 24-32. doi:10.1016/j.tim.2010.09.005. PubMed: 21055948.
    • (2011) Trends Microbiol , vol.19 , pp. 24-32
    • Alizon, S.1    Luciani, F.2    Regoes, R.R.3
  • 22
    • 33747135110 scopus 로고    scopus 로고
    • Human papillomavirus type 16 and 18 variants: race-related distribution and persistence
    • doi: 10.1093/jnci/djj297
    • Xi LF, Kiviat NB, Hildesheim A, Galloway DA, Wheeler CM, et al. (2006) Human papillomavirus type 16 and 18 variants: race-related distribution and persistence. J Natl Cancer Inst 98: 1045-1052. doi:10.1093/jnci/djj297. PubMed: 16882941.
    • (2006) J Natl Cancer Inst , vol.98 , pp. 1045-1052
    • Xi, L.F.1    Kiviat, N.B.2    Hildesheim, A.3    Galloway, D.A.4    Wheeler, C.M.5
  • 23
    • 33947121724 scopus 로고    scopus 로고
    • High grade cervical lesions are caused preferentially by non-European variants of HPVs 16 and 18
    • doi: 10.1002/ijc.22481
    • Sichero L, Ferreira S, Trottier H, Duarte-Franco E, Ferenczy A, et al. (2007) High grade cervical lesions are caused preferentially by non-European variants of HPVs 16 and 18. Int J Cancer 120: 1763-1768. doi:10.1002/ijc.22481. PubMed: 17230525.
    • (2007) Int J Cancer , vol.120 , pp. 1763-1768
    • Sichero, L.1    Ferreira, S.2    Trottier, H.3    Duarte-Franco, E.4    Ferenczy, A.5
  • 24
    • 0035925094 scopus 로고    scopus 로고
    • Human papillomavirus type 16 variants and risk of cervical cancer
    • doi: 10.1093/jnci/93.4.315
    • Hildesheim A, Schiffman M, Bromley C, Wacholder S, Herrero R, et al. (2001) Human papillomavirus type 16 variants and risk of cervical cancer. J Natl Cancer Inst 93: 315-318. doi:10.1093/jnci/93.4.315. PubMed: 11181779.
    • (2001) J Natl Cancer Inst , vol.93 , pp. 315-318
    • Hildesheim, A.1    Schiffman, M.2    Bromley, C.3    Wacholder, S.4    Herrero, R.5
  • 25
    • 33749030202 scopus 로고    scopus 로고
    • Human papillomavirus type 33 polymorphisms and high-grade squamous intraepithelial lesions of the uterine cervix
    • doi: 10.1086/507431
    • Khouadri S, Villa LL, Gagnon S, Koushik A, Richardson H, et al. (2006) Human papillomavirus type 33 polymorphisms and high-grade squamous intraepithelial lesions of the uterine cervix. J Infect Dis 194: 886-894. doi:10.1086/507431. PubMed: 16960775.
    • (2006) J Infect Dis , vol.194 , pp. 886-894
    • Khouadri, S.1    Villa, L.L.2    Gagnon, S.3    Koushik, A.4    Richardson, H.5
  • 26
    • 0037151253 scopus 로고    scopus 로고
    • Association of human papillomavirus type 58 variant with the risk of cervical cancer
    • doi: 10.1093/jnci/94.16.1249
    • Chan PK, Lam CW, Cheung TH, Li WW, Lo KW, et al. (2002) Association of human papillomavirus type 58 variant with the risk of cervical cancer. J Natl Cancer Inst 94: 1249-1253. doi:10.1093/jnci/94.16.1249. PubMed: 12189229.
    • (2002) J Natl Cancer Inst , vol.94 , pp. 1249-1253
    • Chan, P.K.1    Lam, C.W.2    Cheung, T.H.3    Li, W.W.4    Lo, K.W.5
  • 27
    • 77951027069 scopus 로고    scopus 로고
    • A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia
    • doi: 10.1158/0008-5472.CAN-09-4179
    • Schiffman M, Rodriguez AC, Chen Z, Wacholder S, Herrero R, et al. (2010) A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia. Cancer Res 70: 3159-3169. doi:10.1158/0008-5472.CAN-09-4179. PubMed: 20354192.
    • (2010) Cancer Res , vol.70 , pp. 3159-3169
    • Schiffman, M.1    Rodriguez, A.C.2    Chen, Z.3    Wacholder, S.4    Herrero, R.5
  • 28
    • 84867041568 scopus 로고    scopus 로고
    • Association of human papillomavirus type 31 variants with risk of cervical intraepithelial neoplasia grades 2-3
    • PubMed: 22396129
    • Xi LF, Schiffman M, Koutsky LA, Hulbert A, Lee SK, et al. (2012) Association of human papillomavirus type 31 variants with risk of cervical intraepithelial neoplasia grades 2-3. Int J Cancer, 131: 2300-7. PubMed: 22396129.
    • (2012) Int J Cancer , vol.131 , pp. 2300-2307
    • Xi, L.F.1    Schiffman, M.2    Koutsky, L.A.3    Hulbert, A.4    Lee, S.K.5
  • 29
    • 21044431747 scopus 로고    scopus 로고
    • Epidemiologic profile of type-specific human papillomavirus infection and cervical neoplasia in Guanacaste, Costa Rica
    • doi: 10.1086/428850
    • Herrero R, Castle PE, Schiffman M, Bratti MC, Hildesheim A, et al. (2005) Epidemiologic profile of type-specific human papillomavirus infection and cervical neoplasia in Guanacaste, Costa Rica. J Infect Dis 191: 1796-1807. doi:10.1086/428850. PubMed: 15871111.
    • (2005) J Infect Dis , vol.191 , pp. 1796-1807
    • Herrero, R.1    Castle, P.E.2    Schiffman, M.3    Bratti, M.C.4    Hildesheim, A.5
  • 30
    • 0029123281 scopus 로고
    • Human papillomavirus and cervical neoplasia: a case-control study in Taiwan
    • doi: 10.1002/ijc.2910620513
    • Liaw K-L, Hsing AW, Chen C-J, Schiffman MH, Zhang TY, et al. (1995) Human papillomavirus and cervical neoplasia: a case-control study in Taiwan. Int J Cancer 62: 565-571. doi:10.1002/ijc.2910620513. PubMed: 7665227.
    • (1995) Int J Cancer , vol.62 , pp. 565-571
    • Liaw, K.-L.1    Hsing, A.W.2    Chen, C.-J.3    Schiffman, M.H.4    Zhang, T.Y.5
  • 31
    • 38549132871 scopus 로고    scopus 로고
    • Detection of human papillomavirus from self-collected vaginal samples of women in Chiang Mai, Thailand
    • doi: 10.1097/OLQ.0b013e318158af65
    • Wongworapat K, Keawvichit R, Sirirojn B, Dokuta S, Ruangyuttikarn C, et al. (2008) Detection of human papillomavirus from self-collected vaginal samples of women in Chiang Mai, Thailand. Sex Transm Dis 35: 172-173. doi:10.1097/OLQ.0b013e318158af65. PubMed: 18216725.
    • (2008) Sex Transm Dis , vol.35 , pp. 172-173
    • Wongworapat, K.1    Keawvichit, R.2    Sirirojn, B.3    Dokuta, S.4    Ruangyuttikarn, C.5
  • 32
    • 79955392446 scopus 로고    scopus 로고
    • The association of hormonal contraceptive use and HPV prevalence
    • PubMed: 20734390
    • Marks M, Gravitt PE, Gupta SB, Liaw KL, Kim E, et al. (2011) The association of hormonal contraceptive use and HPV prevalence. Int J Cancer, 128: 2962-70. PubMed: 20734390.
    • (2011) Int J Cancer , vol.128 , pp. 2962-2970
    • Marks, M.1    Gravitt, P.E.2    Gupta, S.B.3    Liaw, K.L.4    Kim, E.5
  • 33
    • 67650458435 scopus 로고    scopus 로고
    • Human Papillomavirus Infection and Cervical Cytology in HIV-Infected and HIV-Uninfected Rwandan Women
    • doi: 10.1086/599123
    • Singh DK, Anastos K, Hoover DR, Burk RD, Shi Q, et al. (2009) Human Papillomavirus Infection and Cervical Cytology in HIV-Infected and HIV-Uninfected Rwandan Women. J Infect Dis 199: 1851-1861. doi:10.1086/599123. PubMed: 19435429.
    • (2009) J Infect Dis , vol.199 , pp. 1851-1861
    • Singh, D.K.1    Anastos, K.2    Hoover, D.R.3    Burk, R.D.4    Shi, Q.5
  • 34
    • 33746870348 scopus 로고    scopus 로고
    • Human papillomavirus genotype distribution and cervical squamous intraepithelial lesions among high-risk women with and without HIV-1 infection in Burkina Faso
    • doi: 10.1038/sj.bjc.6603252
    • Didelot-Rousseau MN, Nagot N, Costes-Martineau V, Vallès X, Ouedraogo A, et al. (2006) Human papillomavirus genotype distribution and cervical squamous intraepithelial lesions among high-risk women with and without HIV-1 infection in Burkina Faso. Br J Cancer 95: 355-362. doi:10.1038/sj.bjc.6603252. PubMed: 16832413.
    • (2006) Br J Cancer , vol.95 , pp. 355-362
    • Didelot-Rousseau, M.N.1    Nagot, N.2    Costes-Martineau, V.3    Vallès, X.4    Ouedraogo, A.5
  • 35
    • 34247606063 scopus 로고    scopus 로고
    • Prevalence and distribution of HPV genotypes among HIV-infected women in Zambia
    • PubMed: 17437020
    • Sahasrabuddhe VV, Mwanahamuntu MH, Vermund SH, Huh WK, Lyon MD, et al. (2007) Prevalence and distribution of HPV genotypes among HIV-infected women in Zambia. Br J Cancer 96: 1480-1483. PubMed: 17437020.
    • (2007) Br J Cancer , vol.96 , pp. 1480-1483
    • Sahasrabuddhe, V.V.1    Mwanahamuntu, M.H.2    Vermund, S.H.3    Huh, W.K.4    Lyon, M.D.5
  • 36
    • 0031060050 scopus 로고    scopus 로고
    • Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineage-specific hybridization
    • PubMed: 8968874
    • Wheeler CM, Yamada T, Hildesheim A, Jenison SA, (1997) Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineage-specific hybridization. J Clin Microbiol 35: 11-19. PubMed: 8968874.
    • (1997) J Clin Microbiol , vol.35 , pp. 11-19
    • Wheeler, C.M.1    Yamada, T.2    Hildesheim, A.3    Jenison, S.A.4
  • 37
    • 0034846507 scopus 로고    scopus 로고
    • Characterization of a novel genital human papillomavirus by overlapping PCR: candHPV86 identified in cervicovaginal cells of a woman with cervical neoplasia
    • PubMed: 11514712
    • Terai M, Burk RD, (2001) Characterization of a novel genital human papillomavirus by overlapping PCR: candHPV86 identified in cervicovaginal cells of a woman with cervical neoplasia. J Gen Virol 82: 2035-2040. PubMed: 11514712.
    • (2001) J Gen Virol , vol.82 , pp. 2035-2040
    • Terai, M.1    Burk, R.D.2
  • 38
    • 73649149426 scopus 로고    scopus 로고
    • Whole-genome sequence analysis of human papillomavirus type 18 from infected Thai women
    • doi: 10.1159/000274977
    • Lurchachaiwong W, Junyangdikul P, Termrungruanglert W, Payungporn S, Sampatanukul P, et al. (2010) Whole-genome sequence analysis of human papillomavirus type 18 from infected Thai women. Intervirology 53: 161-166. doi:10.1159/000274977. PubMed: 20068350.
    • (2010) Intervirology , vol.53 , pp. 161-166
    • Lurchachaiwong, W.1    Junyangdikul, P.2    Termrungruanglert, W.3    Payungporn, S.4    Sampatanukul, P.5
  • 39
    • 77249151662 scopus 로고    scopus 로고
    • Detection of HPV types and neutralizing antibodies in women with genital warts in Tianjin City, China
    • doi: 10.1007/s12250-010-3078-4
    • Wu XL, Zhang CT, Zhu XK, Wang YC, (2010) Detection of HPV types and neutralizing antibodies in women with genital warts in Tianjin City, China. Virol Sin 25: 8-17. doi:10.1007/s12250-010-3078-4. PubMed: 20960279.
    • (2010) Virol Sin , vol.25 , pp. 8-17
    • Wu, X.L.1    Zhang, C.T.2    Zhu, X.K.3    Wang, Y.C.4
  • 40
    • 62849098793 scopus 로고    scopus 로고
    • Detection of HPV types and neutralizing antibodies in Gansu province, China
    • doi: 10.1002/jmv.21435
    • Wu X, Zhang C, Feng S, Liu C, Li Y, et al. (2009) Detection of HPV types and neutralizing antibodies in Gansu province, China. J Med Virol 81: 693-702. doi:10.1002/jmv.21435. PubMed: 19235880.
    • (2009) J Med Virol , vol.81 , pp. 693-702
    • Wu, X.1    Zhang, C.2    Feng, S.3    Liu, C.4    Li, Y.5
  • 41
    • 77955019084 scopus 로고    scopus 로고
    • Parallelization of the MAFFT multiple sequence alignment program
    • doi: 10.1093/bioinformatics/btq224
    • Katoh K, Toh H, (2010) Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics 26: 1899-1900. doi:10.1093/bioinformatics/btq224. PubMed: 20427515.
    • (2010) Bioinformatics , vol.26 , pp. 1899-1900
    • Katoh, K.1    Toh, H.2
  • 42
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • doi: 10.1093/bioinformatics/btl446
    • Stamatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. doi:10.1093/bioinformatics/btl446. PubMed: 16928733.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 43
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • doi: 10.1080/10635150390235520
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704. doi:10.1080/10635150390235520. PubMed: 14530136.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 44
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • doi: 10.1093/bioinformatics/btg180
    • Ronquist F, Huelsenbeck JP, (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. doi:10.1093/bioinformatics/btg180. PubMed: 12912839.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 45
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • doi: 10.1093/bioinformatics/14.9.817
    • Posada D, Crandall KA, (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818. doi:10.1093/bioinformatics/14.9.817. PubMed: 9918953.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 46
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • PubMed: 21546353, submitted
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Mol Biol Evol (submitted). PubMed: 21546353.
    • (2011) Mol Biol Evol
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 48
    • 84862908094 scopus 로고    scopus 로고
    • Models and estimators linking individual-based and sample-based rarefaction, extrapolation and comparison of assemblages
    • doi: 10.1093/jpe/rtr044
    • Colwell RK, Chao A, Gotelli NJ, Lin S-Y, Mao CX, et al. (2012) Models and estimators linking individual-based and sample-based rarefaction, extrapolation and comparison of assemblages. Plant Ecol 5: 3-21. doi:10.1093/jpe/rtr044.
    • (2012) Plant Ecol , vol.5 , pp. 3-21
    • Colwell, R.K.1    Chao, A.2    Gotelli, N.J.3    Lin, S.-Y.4    Mao, C.X.5
  • 49
    • 0028348413 scopus 로고
    • Primer-directed sequencing of human papillomavirus types
    • doi: 10.1007/978-3-642-78487-3_2
    • Delius H, Hofmann B, (1994) Primer-directed sequencing of human papillomavirus types. Curr Top Microbiol Immunol 186: 13-31. doi:10.1007/978-3-642-78487-3_2. PubMed: 8205838.
    • (1994) Curr Top Microbiol Immunol , vol.186 , pp. 13-31
    • Delius, H.1    Hofmann, B.2
  • 50
    • 0028124688 scopus 로고
    • Nucleotide sequence and phylogenetic classification of human papillomavirus type 59
    • doi: 10.1006/viro.1994.1467
    • Rho J, Roy-Burman A, Kim H, de Villiers EM, Matsukura T, et al. (1994) Nucleotide sequence and phylogenetic classification of human papillomavirus type 59. Virology 203: 158-161. doi:10.1006/viro.1994.1467. PubMed: 8030272.
    • (1994) Virology , vol.203 , pp. 158-161
    • Rho, J.1    Roy-Burman, A.2    Kim, H.3    de Villiers, E.M.4    Matsukura, T.5
  • 51
    • 0025950293 scopus 로고
    • Characterization of a novel human papillomavirus DNA in the cervical carcinoma cell line ME180
    • PubMed: 1716694
    • Reuter S, Delius H, Kahn T, Hofmann B, zur Hausen H, et al. (1991) Characterization of a novel human papillomavirus DNA in the cervical carcinoma cell line ME180. J Virol 65: 5564-5568. PubMed: 1716694.
    • (1991) J Virol , vol.65 , pp. 5564-5568
    • Reuter, S.1    Delius, H.2    Kahn, T.3    Hofmann, B.4    zur Hausen, H.5
  • 52
    • 0030049073 scopus 로고    scopus 로고
    • Two novel genital human papillomavirus (HPV) types, HPV68 and HPV70, related to the potentially oncogenic HPV39
    • PubMed: 8904450
    • Longuet M, Beaudenon S, Orth G, (1996) Two novel genital human papillomavirus (HPV) types, HPV68 and HPV70, related to the potentially oncogenic HPV39. J Clin Microbiol 34: 738-744. PubMed: 8904450.
    • (1996) J Clin Microbiol , vol.34 , pp. 738-744
    • Longuet, M.1    Beaudenon, S.2    Orth, G.3
  • 53
    • 84860817223 scopus 로고    scopus 로고
    • Recent explosive human population growth has resulted in an excess of rare genetic variants
    • doi: 10.1126/science.1217283
    • Keinan A, Clark AG, (2012) Recent explosive human population growth has resulted in an excess of rare genetic variants. Science 336: 740-743. doi:10.1126/science.1217283. PubMed: 22582263.
    • (2012) Science , vol.336 , pp. 740-743
    • Keinan, A.1    Clark, A.G.2
  • 54
    • 69249085787 scopus 로고    scopus 로고
    • Human papillomaviruses: genetic basis of carcinogenicity
    • doi: 10.1159/000214919
    • Burk RD, Chen Z, Van Doorslaer K, (2009) Human papillomaviruses: genetic basis of carcinogenicity. Public Health Genomics 12: 281-290. doi:10.1159/000214919. PubMed: 19684441.
    • (2009) Public Health Genomics , vol.12 , pp. 281-290
    • Burk, R.D.1    Chen, Z.2    Van Doorslaer, K.3
  • 55
    • 34248550705 scopus 로고    scopus 로고
    • Identification of a novel human papillomavirus (HPV97) related to HPV18 and HPV45
    • Chen Z, Fu L, Herrero R, Schiffman M, Burk RD, (2007) Identification of a novel human papillomavirus (HPV97) related to HPV18 and HPV45. Int J Cancer 121: 2947-2952.
    • (2007) Int J Cancer , vol.121 , pp. 2947-2952
    • Chen, Z.1    Fu, L.2    Herrero, R.3    Schiffman, M.4    Burk, R.D.5
  • 56
    • 70349999938 scopus 로고    scopus 로고
    • Genomic diversity and interspecies host infection of alpha12 Macaca fascicularis papillomaviruses (MfPVs)
    • doi: 10.1016/j.virol.2009.07.012
    • Chen Z, van Doorslaer K, DeSalle R, Wood CE, Kaplan JR, et al. (2009) Genomic diversity and interspecies host infection of alpha12 Macaca fascicularis papillomaviruses (MfPVs). Virology 393: 304-310. doi:10.1016/j.virol.2009.07.012. PubMed: 19716580.
    • (2009) Virology , vol.393 , pp. 304-310
    • Chen, Z.1    van Doorslaer, K.2    DeSalle, R.3    Wood, C.E.4    Kaplan, J.R.5
  • 57
    • 35748950731 scopus 로고    scopus 로고
    • Ancient papillomavirus-host co-speciation in Felidae
    • doi: 10.1186/gb-2007-8-4-r57
    • Rector A, Lemey P, Tachezy R, Mostmans S, Ghim SJ, et al. (2007) Ancient papillomavirus-host co-speciation in Felidae. Genome Biol 8: R57. doi:10.1186/gb-2007-8-4-r57. PubMed: 17430578.
    • (2007) Genome Biol , vol.8
    • Rector, A.1    Lemey, P.2    Tachezy, R.3    Mostmans, S.4    Ghim, S.J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.