메뉴 건너뛰기




Volumn 26, Issue 4, 2013, Pages 577-591

Ferritin-like family proteins in the anaerobe Bacteroides fragilis: When an oxygen storm is coming, take your iron to the shelter

Author keywords

Bacteroides fragilis ferritin superfamily; Dps; Dps Like; Ferritin; Iron storage and detoxification in anaerobes

Indexed keywords

BACTERIAL PROTEIN; DPS LIKE PROTEIN; DPS PROTEIN; FTNA PROTEIN; FTNA1 PROTEIN; FTNA2 PROTEIN; FTNA3 PROTEIN; MESSENGER RNA; MICROORGANISM PROTEIN; UNCLASSIFIED DRUG;

EID: 84881318637     PISSN: 09660844     EISSN: 15728773     Source Type: Journal    
DOI: 10.1007/s10534-013-9650-2     Document Type: Article
Times cited : (39)

References (48)
  • 2
    • 77953807027 scopus 로고    scopus 로고
    • The ferritin-like superfamily: Evolution of the biological iron storeman from a rubrerythrin-like ancestor
    • 20553812 10.1016/j.bbagen.2010.05.010 1:CAS:528:DC%2BC3cXnvVyhtLY%3D
    • Andrews SC (2010) The ferritin-like superfamily: evolution of the biological iron storeman from a rubrerythrin-like ancestor. Biochim Biophys Acta 1800:691-705
    • (2010) Biochim Biophys Acta , vol.1800 , pp. 691-705
    • Andrews, S.C.1
  • 4
    • 0002069688 scopus 로고    scopus 로고
    • Biochemistry of fermentation
    • G.R. Gibson M.B. Roberfroid (eds) Kluwer Academic Dordrecht 10.1007/978-94-017-1079-4-3
    • Bernalier A, Dore J, Durand M (1999) Biochemistry of fermentation. In: Gibson GR, Roberfroid MB (eds) Colonic microbiota, nutrition and health. Kluwer Academic, Dordrecht, pp 37-53
    • (1999) Colonic Microbiota, Nutrition and Health , pp. 37-53
    • Bernalier, A.1    Dore, J.2    Durand, M.3
  • 5
    • 77953809618 scopus 로고    scopus 로고
    • The iron redox and hydrolysis chemistry of the ferritins
    • 20382203 10.1016/j.bbagen.2010.03.021 1:CAS:528:DC%2BC3cXnvVyhtb4%3D
    • Bou-Abdallah F (2010) The iron redox and hydrolysis chemistry of the ferritins. Biochim Biophys Acta 1800:719-731
    • (2010) Biochim Biophys Acta , vol.1800 , pp. 719-731
    • Bou-Abdallah, F.1
  • 6
    • 0024369962 scopus 로고
    • Pathogenicity of Bacteroides fragilis group
    • 2679351 1:STN:280:DyaK3c%2FisVyqtQ%3D%3D
    • Brook I (1989) Pathogenicity of Bacteroides fragilis group. Ann Clin Lab Sci 19:360-376
    • (1989) Ann Clin Lab Sci , vol.19 , pp. 360-376
    • Brook, I.1
  • 7
    • 0033850395 scopus 로고    scopus 로고
    • Aerobic and anaerobic microbiology in intra-abdominal infections associated with diverticulitis
    • Brook I, Frazier EH (2000) Aerobic and anaerobic microbiology in intra-abdominal infections associated with diverticulitis. J Med Microbiol 49:827-830 (Pubitemid 30666635)
    • (2000) Journal of Medical Microbiology , vol.49 , Issue.9 , pp. 827-830
    • Brook, I.1    Frazier, E.H.2
  • 8
    • 78650976369 scopus 로고    scopus 로고
    • Structure, function and regulation of the DNA-binding protein Dps and its role in acid and oxidative stress resistance in Escherichia coli: A review
    • 21143355 10.1111/j.1365-2672.2010.04890.x
    • Calhoun LN, Kwon YM (2010) Structure, function and regulation of the DNA-binding protein Dps and its role in acid and oxidative stress resistance in Escherichia coli: a review. J Appl Microbiol 110:375-386
    • (2010) J Appl Microbiol , vol.110 , pp. 375-386
    • Calhoun, L.N.1    Kwon, Y.M.2
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • 10.2307/2408678
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 84871344973 scopus 로고    scopus 로고
    • The role of heme binding by DNA-protective protein from starved cells (Dps) in the tolerance of Porphyromonas gingivalis to heme toxicity
    • 23086936 10.1074/jbc.M112.392787 1:CAS:528:DC%2BC38Xhslyks73O
    • Gao JL, Lu Y, Browne G, Yap BC, Trewhella J, Hunter N, Nguyen KA (2012) The role of heme binding by DNA-protective protein from starved cells (Dps) in the tolerance of Porphyromonas gingivalis to heme toxicity. J Biol Chem 287:42243-42258
    • (2012) J Biol Chem , vol.287 , pp. 42243-42258
    • Gao, J.L.1    Lu, Y.2    Browne, G.3    Yap, B.C.4    Trewhella, J.5    Hunter, N.6    Nguyen, K.A.7
  • 13
    • 33748478583 scopus 로고    scopus 로고
    • Structure of the DPS-like protein from Sulfolobus solfataricus reveals a bacterioferritin-like dimetal binding site within a DPS-like dodecameric assembly
    • DOI 10.1021/bi060782u
    • Gauss GH, Benas P, Wiedenheft B, Young M, Douglas T, Lawrence CM (2006) Structure of the DPS-like protein from Sulfolobus solfataricus reveals a bacterioferritin-like dimetal binding site within a DPS-like dodecameric assembly. Biochemistry 45:10815-10827 (Pubitemid 44360151)
    • (2006) Biochemistry , vol.45 , Issue.36 , pp. 10815-10827
    • Gauss, G.H.1    Benas, P.2    Wiedenheft, B.3    Young, M.4    Douglas, T.5    Lawrence, C.M.6
  • 14
    • 84862907816 scopus 로고    scopus 로고
    • Characterization of the Bacteroides fragilis bfr gene product identifies a bacterial DPS-like protein and suggests evolutionary links in the ferritin superfamily
    • 22020642 10.1128/JB.05260-11 1:CAS:528:DC%2BC38Xht1Srtb3I
    • Gauss GH, Reott MA, Rocha ER, Young MJ, Douglas T, Smith CJ, Lawrence CM (2012) Characterization of the Bacteroides fragilis bfr gene product identifies a bacterial DPS-like protein and suggests evolutionary links in the ferritin superfamily. J Bacteriol 194:15-27
    • (2012) J Bacteriol , vol.194 , pp. 15-27
    • Gauss, G.H.1    Reott, M.A.2    Rocha, E.R.3    Young, M.J.4    Douglas, T.5    Smith, C.J.6    Lawrence, C.M.7
  • 16
    • 0036399823 scopus 로고    scopus 로고
    • How host-microbial interactions shape the nutrient environment of the mammalian intestine
    • DOI 10.1146/annurev.nutr.22.011602.092259
    • Hooper LV, Midtvedt T, Gordon JI (2002) How host-microbial interactions shape the nutrient environment of the mammalian intestine. Annu Rev Nutr 22:283-307 (Pubitemid 35221463)
    • (2002) Annual Review of Nutrition , vol.22 , pp. 283-307
    • Hooper, L.V.1    Midwedt, T.2    Gordon, J.I.3
  • 17
    • 0035985581 scopus 로고    scopus 로고
    • How oxygen damages microbes: Oxygen tolerance and obligate anaerobiosis
    • DOI 10.1016/S0065-2911(02)46003-1
    • Imlay JA (2002) How oxygen damages microbes: oxygen tolerance and obligate anaerobiosis. Adv Microb Physiol 46:111-153 (Pubitemid 34602241)
    • (2002) Advances in Microbial Physiology , vol.46 , pp. 111-153
    • Imlay, J.A.1
  • 18
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • 1633570 1:CAS:528:DyaK38Xlt1Okt7w%3D
    • Jones DT, Taylor WR, Thornton JM (1992) The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci 8:275-282
    • (1992) Comput Appl Biosci , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 19
    • 0032921725 scopus 로고    scopus 로고
    • Oral ferrous sulfate supplements increase the free radical-generating capacity of feces from healthy volunteers
    • Lund EK, Wharf SG, Fairweather-Tait SJ, Johnson IT (1999) Oral ferrous sulfate supplements increase the free radical-generating capacity of feces from healthy volunteers. Am J Clin Nutr 69:250-255 (Pubitemid 29065547)
    • (1999) American Journal of Clinical Nutrition , vol.69 , Issue.2 , pp. 250-255
    • Lund, E.K.1    Wharf, S.G.2    Fairweather-Tait, S.J.3    Johnson, I.T.4
  • 20
    • 61549102820 scopus 로고    scopus 로고
    • Intra-abdominal infections
    • 19281892 10.1016/j.suc.2008.12.001
    • Mazuski JE, Solomkin JS (2009) Intra-abdominal infections. Surg Clin N Am 89:421-437
    • (2009) Surg Clin N Am , vol.89 , pp. 421-437
    • Mazuski, J.E.1    Solomkin, J.S.2
  • 23
    • 84856723740 scopus 로고    scopus 로고
    • Fumarate reductase is a major contributor to the generation of reactive oxygen species in the anaerobe Bacteroides fragilis
    • 22075026 10.1099/mic.0.054403-0 1:CAS:528:DC%2BC38XjsV2qtbg%3D
    • Meehan BM, Malamy MH (2012) Fumarate reductase is a major contributor to the generation of reactive oxygen species in the anaerobe Bacteroides fragilis. Microbiology 158:539-546
    • (2012) Microbiology , vol.158 , pp. 539-546
    • Meehan, B.M.1    Malamy, M.H.2
  • 24
    • 59849113547 scopus 로고    scopus 로고
    • Microbes in gastrointestinal health and disease
    • 19026645 10.1053/j.gastro.2008.10.080
    • Neish AS (2009) Microbes in gastrointestinal health and disease. Gastroenterology 136:65-80
    • (2009) Gastroenterology , vol.136 , pp. 65-80
    • Neish, A.S.1
  • 25
    • 34249656239 scopus 로고    scopus 로고
    • Microbes and the developing gastrointestinal tract
    • 17374791 10.1177/0115426507022002174
    • Neu J, Douglas-Escobar M, Lopez M (2007) Microbes and the developing gastrointestinal tract. Nutr Clin Pract 22:174-182
    • (2007) Nutr Clin Pract , vol.22 , pp. 174-182
    • Neu, J.1    Douglas-Escobar, M.2    Lopez, M.3
  • 26
    • 64249130651 scopus 로고    scopus 로고
    • Clinical features and prognostic factors of anaerobic infections: A 7-year retrospective study
    • 19270476 10.3904/kjim.2009.24.1.13
    • Park Y, Choi JY, Yong D, Lee K, Kim JM (2009) Clinical features and prognostic factors of anaerobic infections: a 7-year retrospective study. Korean J Intern Med 24:13-18
    • (2009) Korean J Intern Med , vol.24 , pp. 13-18
    • Park, Y.1    Choi, J.Y.2    Yong, D.3    Lee, K.4    Kim, J.M.5
  • 27
    • 83655180137 scopus 로고    scopus 로고
    • The starting lineup: Key microbial players in intestinal immunity and homeostasis
    • Reading NC, Kasper DL (2011) The starting lineup: key microbial players in intestinal immunity and homeostasis. Frontiers Microbiol 2:1-10
    • (2011) Frontiers Microbiol , vol.2 , pp. 1-10
    • Reading, N.C.1    Kasper, D.L.2
  • 28
    • 0031734418 scopus 로고    scopus 로고
    • Characterization of a peroxide-resistant mutant of the anaerobic bacterium Bacteroides fragilis
    • Rocha ER, Smith CJ (1998) Characterization of a peroxide-resistant mutant of the anaerobic bacterium Bacteroides fragilis. J Bacteriol 180:5906-5912 (Pubitemid 28514207)
    • (1998) Journal of Bacteriology , vol.180 , Issue.22 , pp. 5906-5912
    • Rocha, E.R.1    Smith, C.J.2
  • 29
    • 4344664059 scopus 로고    scopus 로고
    • Transcriptional regulation of the Bacteroides fragilis ferritin gene (ftnA) by redox stress
    • Rocha ER, Smith CJ (2004) Transcriptional regulation of the Bacteroides fragilis ferritin gene (ftnA) by redox stress. Microbiology 150:2125-2134 (Pubitemid 39117626)
    • (2004) Microbiology , vol.150 , Issue.7 , pp. 2125-2134
    • Rocha, E.R.1    Smith, C.J.2
  • 30
    • 84881313368 scopus 로고    scopus 로고
    • Heme and iron metabolism in Bacteroides
    • S.C. Andrews Pierre Cornelis (eds) Caister Academic Norwich
    • Rocha ER, Smith CJ (2010) Heme and iron metabolism in Bacteroides. In: Andrews SC, Cornelis Pierre (eds) Iron uptake and homeostasis in microorganisms, chapter 9. Caister Academic, Norwich, pp 155-165
    • (2010) Iron Uptake and Homeostasis in Microorganisms, Chapter 9 , pp. 155-165
    • Rocha, E.R.1    Smith, C.J.2
  • 31
    • 0029848194 scopus 로고    scopus 로고
    • Oxidative stress response in an anaerobe, Bacteroides fragilis: A role for catalase in protection against hydrogen peroxide
    • Rocha ER, Selby T, Coleman JP, Smith CJ (1996) Oxidative stress response in an anaerobe, Bacteroides fragilis: a role for catalase in protection against hydrogen peroxide. J Bacteriol 178:6895-6903 (Pubitemid 26404967)
    • (1996) Journal of Bacteriology , vol.178 , Issue.23 , pp. 6895-6903
    • Rocha, E.R.1    Selby, T.2    Coleman, J.P.3    Jeffrey Smith, C.4
  • 32
    • 0033816764 scopus 로고    scopus 로고
    • The redox-sensitive transcriptional activator OxyR regulates the peroxide response regulon in the obligate anaerobe Bacteroides fragilis
    • 10960088 10.1128/JB.182.18.5059-5069.2000 1:CAS:528:DC%2BD3cXmsVOqtbo%3D
    • Rocha ER, Owens G Jr, Smith CJ (2000) The redox-sensitive transcriptional activator OxyR regulates the peroxide response regulon in the obligate anaerobe Bacteroides fragilis. J Bacteriol 182:5059-5069
    • (2000) J Bacteriol , vol.182 , pp. 5059-5069
    • Rocha, E.R.1    Owens, Jr.G.2    Smith, C.J.3
  • 33
    • 0141788349 scopus 로고    scopus 로고
    • The complex oxidative stress response of Bacteroides fragilis: The role of OxyR in control of gene expression
    • DOI 10.1016/S1075-9964(03)00118-5
    • Rocha ER, Herren CD, Smalley DJ, Smith CJ (2003) The complex oxidative stress response of Bacteroides fragilis: the role of OxyR in control of gene expression. Anaerobe 9:165-173 (Pubitemid 37122585)
    • (2003) Anaerobe , vol.9 , Issue.4 , pp. 165-173
    • Rocha, E.R.1    Herren, C.D.2    Smalley, D.J.3    Smith, C.J.4
  • 34
    • 36549049444 scopus 로고    scopus 로고
    • Thioredoxin reductase is essential for thiol/disulfide redox control and oxidative stress survival of the anaerobe Bacteroides fragilis
    • DOI 10.1128/JB.00714-07
    • Rocha ER, Tzianabos AO, Smith CJ (2007) Thioredoxin reductase is essential for thiol/disulfide redox control and oxidative stress survival of the anaerobe Bacteroides fragilis. J Bacteriol 189:8015-8023 (Pubitemid 350178912)
    • (2007) Journal of Bacteriology , vol.189 , Issue.22 , pp. 8015-8023
    • Rocha, E.R.1    Tzianabos, A.O.2    Smith, C.J.3
  • 36
    • 0017341656 scopus 로고
    • Microbial ecology of the gastrointestinal tract
    • 10.1146/annurev.mi.31.100177.000543 1:STN:280:DyaE1c%2FhvVGksw%3D%3D
    • Savage DC (1977) Microbial ecology of the gastrointestinal tract. Ann Rev Microbiol 31:107-133
    • (1977) Ann Rev Microbiol , vol.31 , pp. 107-133
    • Savage, D.C.1
  • 37
    • 77955647582 scopus 로고    scopus 로고
    • Gut microbiota in health and disease
    • 20664075 10.1152/physrev.00045.2009 1:CAS:528:DC%2BC3cXhtVyku7rM
    • Sekirov I, Russell SL, Antunes CM, Finlay BB (2010) Gut microbiota in health and disease. Physiol Rev 90:859-904
    • (2010) Physiol Rev , vol.90 , pp. 859-904
    • Sekirov, I.1    Russell, S.L.2    Antunes, C.M.3    Finlay, B.B.4
  • 38
    • 36849044887 scopus 로고    scopus 로고
    • The medically important Bacteroides spp. health and disease
    • M. Dworkin S. Falkow E. Rosenberg K.H. Schleifer E. Stackebrandt (eds) Springer New York 10.1007/0-387-30747-8-14
    • Smith CJ, Rocha ER, Paster BJ (2006) The medically important Bacteroides spp. health and disease. In: Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (eds) The prokaryotes, vol. 7. Springer, New York, pp 381-427
    • (2006) The Prokaryotes, Vol. 7 , pp. 381-427
    • Smith, C.J.1    Rocha, E.R.2    Paster, B.J.3
  • 40
  • 41
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 21546353 10.1093/molbev/msr121 1:CAS:528:DC%2BC3MXht1eiu73K
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 42
    • 40749103351 scopus 로고    scopus 로고
    • The physiological relevance of the intestinal microbiota - Contributions to human health
    • Tappenden KA, Deutsch AS (2007) The physiological relevance of the intestinal microbiota - contributions to human health. J Am Coll Nutr 26:676S-683S
    • (2007) J Am Coll Nutr , vol.26
    • Tappenden, K.A.1    Deutsch, A.S.2
  • 43
    • 0033985228 scopus 로고    scopus 로고
    • Iron and oxidative stress in bacteria
    • DOI 10.1006/abbi.1999.1518
    • Touati D (2000) Iron and oxidative stress in bacteria. Arch Biochem Biophys 373:1-6 (Pubitemid 30046483)
    • (2000) Archives of Biochemistry and Biophysics , vol.373 , Issue.1 , pp. 1-6
    • Touati, D.1
  • 44
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • DOI 10.1038/nature05414, PII NATURE05414
    • Turnbaugh PJ, Ley RE, Mahowald MA, Magrini V, Mardis ER, Gordon JI (2006) An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444:1027-1031 (Pubitemid 46018515)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 46
    • 0036667556 scopus 로고    scopus 로고
    • The role of cysteine residues in the oxidation of ferritin
    • DOI 10.1016/S0891-5849(02)00915-2, PII S0891584902009152
    • Welch DK, Reilly CA, Aust SD (2002) The role of cysteine residues in the oxidation of ferritin. Free Rad Biol Med 33:399-408 (Pubitemid 34786279)
    • (2002) Free Radical Biology and Medicine , vol.33 , Issue.3 , pp. 399-408
    • Welch, K.D.1    Reilly, C.A.2    Aust, S.D.3
  • 47
    • 35448985445 scopus 로고    scopus 로고
    • Bacteroides: The good, the bad, and the nitty-gritty
    • DOI 10.1128/CMR.00008-07
    • Wexler HM (2007) Bacteroides: the good, the bad, and the nitty-gritty. Clin Microbiol Rev 20:593-621 (Pubitemid 47623770)
    • (2007) Clinical Microbiology Reviews , vol.20 , Issue.4 , pp. 593-621
    • Wexler, H.M.1
  • 48
    • 0037008743 scopus 로고    scopus 로고
    • Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritin-like DNA-binding protein of Escherichia coli
    • DOI 10.1074/jbc.M202094200
    • Zhao G, Ceci P, Ilari A, Giangiacomo L, Laue TM, Chiancone E, Chasteen ND (2002) Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritin-like DNA-binding protein of Escherichia coli. J Biol Chem 277:27689-27696 (Pubitemid 34966712)
    • (2002) Journal of Biological Chemistry , vol.277 , Issue.31 , pp. 27689-27696
    • Zhao, G.1    Ceci, P.2    Ilari, A.3    Giangiacomo, L.4    Laue, T.M.5    Chiancone, E.6    Dennis Chasteen, N.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.