-
1
-
-
84857649533
-
The evolution of the Escherichia coli phylogeny
-
Chaudhuri RR, Henderson IR. 2012. The evolution of the Escherichia coli phylogeny. Infect. Genet. Evol. 12:214-226.
-
(2012)
Infect. Genet. Evol.
, vol.12
, pp. 214-226
-
-
Chaudhuri, R.R.1
Henderson, I.R.2
-
3
-
-
73949118739
-
Molecular mechanisms of Escherichia coli pathogenicity
-
Croxen MA, Finlay BB. 2010. Molecular mechanisms of Escherichia coli pathogenicity. Nat. Rev. Microbiol. 8:26-38.
-
(2010)
Nat. Rev. Microbiol.
, vol.8
, pp. 26-38
-
-
Croxen, M.A.1
Finlay, B.B.2
-
4
-
-
0036225041
-
The flagella of enteropathogenic Escherichia coli mediate adherence to epithelial cells
-
Giron JA, Torres AG, Freer E, Kaper JB. 2002. The flagella of enteropathogenic Escherichia coli mediate adherence to epithelial cells. Mol. Microbiol. 44:361-379.
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 361-379
-
-
Giron, J.A.1
Torres, A.G.2
Freer, E.3
Kaper, J.B.4
-
5
-
-
27744471448
-
Role of motility in the colonization of uropathogenic Escherichia coli in the urinary tract
-
Lane MC, Lockatell V, Monterosso G, Lamphier D, Weinert J, Hebel JR, Johnson DE, Mobley HLT. 2005. Role of motility in the colonization of uropathogenic Escherichia coli in the urinary tract. Infect. Immun. 73: 7644-7656.
-
(2005)
Infect. Immun.
, vol.73
, pp. 7644-7656
-
-
Lane, M.C.1
Lockatell, V.2
Monterosso, G.3
Lamphier, D.4
Weinert, J.5
Hebel, J.R.6
Johnson, D.E.7
Mobley, H.L.T.8
-
6
-
-
37749029507
-
Bacterial chemoreceptors: high-performance signaling in networked arrays
-
Hazelbauer GL, Falke JJ, Parkinson JS. 2008. Bacterial chemoreceptors: high-performance signaling in networked arrays. Trends Biochem. Sci. 33:9-19.
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 9-19
-
-
Hazelbauer, G.L.1
Falke, J.J.2
Parkinson, J.S.3
-
8
-
-
78751525262
-
Chemotaxis to the quorum-sensing signal AI-2 requires the Tsr chemoreceptor and the periplasmic LsrB AI- 2-binding protein
-
Hegde M, Englert DL, Schrock S, Cohn WB, Vogt C, Wood TK, Manson MD, Jayaraman A. 2011. Chemotaxis to the quorum-sensing signal AI-2 requires the Tsr chemoreceptor and the periplasmic LsrB AI- 2-binding protein. J. Bacteriol. 193:768-773.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 768-773
-
-
Hegde, M.1
Englert, D.L.2
Schrock, S.3
Cohn, W.B.4
Vogt, C.5
Wood, T.K.6
Manson, M.D.7
Jayaraman, A.8
-
9
-
-
0017667528
-
Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins
-
Springer MS, Goy MF, Adler J. 1977. Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U. S. A. 74:3312-3316.
-
(1977)
Proc. Natl. Acad. Sci. U. S. A.
, vol.74
, pp. 3312-3316
-
-
Springer, M.S.1
Goy, M.F.2
Adler, J.3
-
10
-
-
0141591603
-
Aer and Tsr guide Escherichia coli in spatial gradients of oxidizable substrates
-
Greer-Phillips SE, Alexandre G, Taylor BL, Zhulin IB. 2003. Aer and Tsr guide Escherichia coli in spatial gradients of oxidizable substrates. Microbiology 149:2661-2667.
-
(2003)
Microbiology
, vol.149
, pp. 2661-2667
-
-
Greer-Phillips, S.E.1
Alexandre, G.2
Taylor, B.L.3
Zhulin, I.B.4
-
11
-
-
0030883388
-
The Aer protein and the serine chemoreceptor Tsr independently sense intracellular energy levels and transduce oxygen, redox, and energy signals for Escherichia coli behavior
-
Rebbapragada A, Johnson MS, Harding GP, Zuccarelli AJ, Fletcher HM, Zhulin IB, Taylor BL. 1997. The Aer protein and the serine chemoreceptor Tsr independently sense intracellular energy levels and transduce oxygen, redox, and energy signals for Escherichia coli behavior. Proc. Natl. Acad. Sci. U. S. A. 94:10541-10546.
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 10541-10546
-
-
Rebbapragada, A.1
Johnson, M.S.2
Harding, G.P.3
Zuccarelli, A.J.4
Fletcher, H.M.5
Zhulin, I.B.6
Taylor, B.L.7
-
12
-
-
0016608768
-
Maltose chemoreceptor of Escherichia coli
-
Hazelbauer GL. 1975. Maltose chemoreceptor of Escherichia coli. J. Bacteriol. 122:206-214.
-
(1975)
J. Bacteriol.
, vol.122
, pp. 206-214
-
-
Hazelbauer, G.L.1
-
13
-
-
0016258213
-
Negative chemotaxis in Escherichia coli
-
Tso WW, Adler J. 1974. Negative chemotaxis in Escherichia coli. J. Bacteriol. 118:560-576.
-
(1974)
J. Bacteriol.
, vol.118
, pp. 560-576
-
-
Tso, W.W.1
Adler, J.2
-
14
-
-
0018293842
-
Transposon-insertion mutants of Escherichia coli K12 defective in a component common to galactose and ribose chemotaxis
-
Harayama S, Palva ET, Hazelbauer GL. 1979. Transposon-insertion mutants of Escherichia coli K12 defective in a component common to galactose and ribose chemotaxis. Mol. Gen. Genet. 171:193-203.
-
(1979)
Mol. Gen. Genet.
, vol.171
, pp. 193-203
-
-
Harayama, S.1
Palva, E.T.2
Hazelbauer, G.L.3
-
15
-
-
38649104821
-
Chemotaxis of Escherichia coli to pyrimidines: a new role for the signal transducer Tap
-
Liu X, Parales RE. 2008. Chemotaxis of Escherichia coli to pyrimidines: a new role for the signal transducer Tap. J. Bacteriol. 190:972-979.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 972-979
-
-
Liu, X.1
Parales, R.E.2
-
18
-
-
77956634301
-
Origins and diversification of a complex signal transduction system in prokaryotes
-
doi:10.1126/scisignal.2000724
-
Wuichet K, Zhulin IB. 2010. Origins and diversification of a complex signal transduction system in prokaryotes. Sci. Signal. 3:ra50. doi:10.1126/scisignal.2000724.
-
(2010)
Sci. Signal.
, vol.3
-
-
Wuichet, K.1
Zhulin, I.B.2
-
19
-
-
33644861941
-
Identification of new flagellar genes of Salmonella enterica serovar Typhimurium
-
Frye J, Karlinsey JE, Felise HR, Marzolf B, Dowidar N, McClelland M, Hughes KT. 2006. Identification of new flagellar genes of Salmonella enterica serovar Typhimurium. J. Bacteriol. 188:2233-2243.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 2233-2243
-
-
Frye, J.1
Karlinsey, J.E.2
Felise, H.R.3
Marzolf, B.4
Dowidar, N.5
McClelland, M.6
Hughes, K.T.7
-
20
-
-
60549112381
-
Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains
-
Jaureguy F, Landraud L, Passet V, Diancourt L, Frapy E, Guigon G, Carbonnelle E, Lortholary O, Clermont O, Denamur E, Picard B, Nassif X, Brisse S. 2008. Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains. BMC Genomics 9:560.
-
(2008)
BMC Genomics
, vol.9
, pp. 560
-
-
Jaureguy, F.1
Landraud, L.2
Passet, V.3
Diancourt, L.4
Frapy, E.5
Guigon, G.6
Carbonnelle, E.7
Lortholary, O.8
Clermont, O.9
Denamur, E.10
Picard, B.11
Nassif, X.12
Brisse, S.13
-
21
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
doi:10.1371/journal.pgen.1000344.
-
Touchon M, Hoede C, Tenaillon O, Barbe V, Baeriswyl S, Bidet P, Bingen E, Bonacorsi S, Bouchier C, Bouvet O, Calteau A, Chiapello H, Clermont O, Cruveiller S, Danchin A, Diard M, Dossat C, Karoui ME, Frapy E, Garry L, Ghigo JM, Gilles AM, Johnson J, Le Bouguenec C, Lescat M, Mangenot S, Martinez-Jehanne V, Matic I, Nassif X, Oztas S, Petit MA, Pichon C, Rouy Z, Ruf CS, Schneider D, Tourret J, Vacherie B, Vallenet D, Medigue C, Rocha EP, Denamur E. 2009. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet. 5:e1000344. doi:10.1371/journal.pgen.1000344.
-
(2009)
PLoS Genet.
, vol.5
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
Bidet, P.6
Bingen, E.7
Bonacorsi, S.8
Bouchier, C.9
Bouvet, O.10
Calteau, A.11
Chiapello, H.12
Clermont, O.13
Cruveiller, S.14
Danchin, A.15
Diard, M.16
Dossat, C.17
Karoui, M.E.18
Frapy, E.19
Garry, L.20
Ghigo, J.M.21
Gilles, A.M.22
Johnson, J.23
Le Bouguenec, C.24
Lescat, M.25
Mangenot, S.26
Martinez-Jehanne, V.27
Matic, I.28
Nassif, X.29
Oztas, S.30
Petit, M.A.31
Pichon, C.32
Rouy, Z.33
Ruf, C.S.34
Schneider, D.35
Tourret, J.36
Vacherie, B.37
Vallenet, D.38
Medigue, C.39
Rocha, E.P.40
Denamur, E.41
more..
-
22
-
-
33745282930
-
Sex and virulence in Escherichia coli: an evolutionary perspective
-
Wirth T, Falush D, Lan R, Colles F, Mensa P, Wieler LH, Karch H, Reeves PR, Maiden MC, Ochman H, Achtman M. 2006. Sex and virulence in Escherichia coli: an evolutionary perspective. Mol. Microbiol. 60: 1136-1151.
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 1136-1151
-
-
Wirth, T.1
Falush, D.2
Lan, R.3
Colles, F.4
Mensa, P.5
Wieler, L.H.6
Karch, H.7
Reeves, P.R.8
Maiden, M.C.9
Ochman, H.10
Achtman, M.11
-
23
-
-
0021367325
-
Standard reference strains of Escherichia coli from natural populations
-
Ochman H, Selander RK. 1984. Standard reference strains of Escherichia coli from natural populations. J. Bacteriol. 157:690-693.
-
(1984)
J. Bacteriol.
, vol.157
, pp. 690-693
-
-
Ochman, H.1
Selander, R.K.2
-
24
-
-
2442667673
-
A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli
-
Escobar-Paramo P, Clermont O, Blanc-Potard AB, Bui H, Le Bouguenec C, Denamur E. 2004. A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli. Mol. Biol. Evol. 21:1085-1094.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1085-1094
-
-
Escobar-Paramo, P.1
Clermont, O.2
Blanc-Potard, A.B.3
Bui, H.4
Le Bouguenec, C.5
Denamur, E.6
-
25
-
-
83155178426
-
Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity
-
White AP, Sibley KA, Sibley CD, Wasmuth JD, Schaefer R, Surette MG, Edge TA, Neumann NF. 2011. Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity. Appl. Environ. Microbiol. 77:7620-7632.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 7620-7632
-
-
White, A.P.1
Sibley, K.A.2
Sibley, C.D.3
Wasmuth, J.D.4
Schaefer, R.5
Surette, M.G.6
Edge, T.A.7
Neumann, N.F.8
-
26
-
-
84865818495
-
A phylogenomic analysis of Escherichia coli/Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation
-
Zhang Y, Lin K. 2012. A phylogenomic analysis of Escherichia coli/Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation. BMC Evol. Biol. 12:174.
-
(2012)
BMC Evol. Biol.
, vol.12
, pp. 174
-
-
Zhang, Y.1
Lin, K.2
-
27
-
-
84870049256
-
Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities
-
Skippington E, Ragan MA. 2012. Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities. Open Biol. 2:120112.
-
(2012)
Open Biol.
, vol.2
, pp. 120112
-
-
Skippington, E.1
Ragan, M.A.2
-
28
-
-
28544440091
-
Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery
-
Yang F, Yang J, Zhang X, Chen L, Jiang Y, Yan Y, Tang X, Wang J, Xiong Z, Dong J, Xue Y, Zhu Y, Xu X, Sun L, Chen S, Nie H, Peng J, Xu J, Wang Y, Yuan Z, Wen Y, Yao Z, Shen Y, Qiang B, Hou Y, Yu J, Jin Q. 2005. Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery. Nucleic Acids Res. 33:6445-6458.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 6445-6458
-
-
Yang, F.1
Yang, J.2
Zhang, X.3
Chen, L.4
Jiang, Y.5
Yan, Y.6
Tang, X.7
Wang, J.8
Xiong, Z.9
Dong, J.10
Xue, Y.11
Zhu, Y.12
Xu, X.13
Sun, L.14
Chen, S.15
Nie, H.16
Peng, J.17
Xu, J.18
Wang, Y.19
Yuan, Z.20
Wen, Y.21
Yao, Z.22
Shen, Y.23
Qiang, B.24
Hou, Y.25
Yu, J.26
Jin, Q.27
more..
-
29
-
-
33746626069
-
Uropathogenic Escherichia coli strains generally lack functional Trg and Tap chemoreceptors found in the majority of E
-
Lane MC, Lloyd AL, Markyvech TA, Hagan EC, Mobley HLT. 2006. Uropathogenic Escherichia coli strains generally lack functional Trg and Tap chemoreceptors found in the majority of E. coli strains strictly residing in the gut. J. Bacteriol. 188:5618-5625.
-
(2006)
coli strains strictly residing in the gut. J. Bacteriol.
, vol.188
, pp. 5618-5625
-
-
Lane, M.C.1
Lloyd, A.L.2
Markyvech, T.A.3
Hagan, E.C.4
Mobley, H.L.T.5
-
30
-
-
0031743421
-
Profile hidden Markov models
-
Eddy SR. 1998. Profile hidden Markov models. Bioinformatics 14:755-763.
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
-
31
-
-
65449188232
-
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse AM, Procter JB, Martin DMA, Clamp M, Barton GJ. 2009. Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189-1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
32
-
-
45949107473
-
Recent developments in the MAFFT multiple sequence alignment program
-
Katoh K, Toh H. 2008. Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform. 9:286-298.
-
(2008)
Brief Bioinform.
, vol.9
, pp. 286-298
-
-
Katoh, K.1
Toh, H.2
-
33
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
35
-
-
74049108922
-
BLAST plus: architecture and applications
-
Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL. 2009. BLAST plus: architecture and applications. BMC Bioinformatics 10:421.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 421
-
-
Camacho, C.1
Coulouris, G.2
Avagyan, V.3
Ma, N.4
Papadopoulos, J.5
Bealer, K.6
Madden, T.L.7
-
36
-
-
77958603351
-
Complete genome sequence of Crohn's disease-associated adherentinvasive E
-
doi:10.1371/journal.pone.0012714
-
Miquel S, Peyretaillade E, Claret L, de Vallee A, Dossat C, Vacherie B, Zineb el H, Segurens HB Barbe V, Sauvanet P, Neut C, Colombel JF, Medigue C, Mojica FJ, Peyret P, Bonnet R, Darfeuille-Michaud A. 2010. Complete genome sequence of Crohn's disease-associated adherentinvasive E. coli strain LF82. PLoS One 5:e12714. doi:10.1371/journal.pone.0012714.
-
(2010)
coli strain LF82. PLoS One
, vol.5
-
-
Miquel, S.1
Peyretaillade, E.2
Claret, L.3
de Vallee, A.4
Dossat, C.5
Vacherie, B.6
Zineb El, H.7
Segurens, H.B.8
Barbe, V.9
Sauvanet, P.10
Neut, C.11
Colombel, J.F.12
Medigue, C.13
Mojica, F.J.14
Peyret, P.15
Bonnet, R.16
Darfeuille-Michaud, A.17
-
37
-
-
19944390941
-
Microevolution and history of the plague bacillus, Yersenia pestis
-
Achtman M, Morelli G, Zhu P, Wirth T, Diehl I, Kusecek B, Vogler AJ, Wagner DM, Allender CJ, Easterday WR, Chenal-Francisque V, Worsham P, Thomson NR, Parkhill J, Lindler LE, Carniel E, Keim P. 2004. Microevolution and history of the plague bacillus, Yersenia pestis. Proc. Natl. Acad. Sci. U. S. A. 10:17837-17842.
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.10
, pp. 17837-17842
-
-
Achtman, M.1
Morelli, G.2
Zhu, P.3
Wirth, T.4
Diehl, I.5
Kusecek, B.6
Vogler, A.J.7
Wagner, D.M.8
Allender, C.J.9
Easterday, W.R.10
Chenal-Francisque, V.11
Worsham, P.12
Thomson, N.R.13
Parkhill, J.14
Lindler, L.E.15
Carniel, E.16
Keim, P.17
-
38
-
-
65249190698
-
Wholegenome-based phylogeny and divergence of the genus Brucella
-
Foster JT, Beckstrom-Sterberg SM, Pearson T, Beckstrom-Sternberg JS, Chain PSG, Roberto FF, Hinath J, Brettin T, Keim P. 2009. Wholegenome-based phylogeny and divergence of the genus Brucella. J. Bacteriol. 191:2864-2870.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 2864-2870
-
-
Foster, J.T.1
Beckstrom-Sterberg, S.M.2
Pearson, T.3
Beckstrom-Sternberg, J.S.4
Chain, P.S.G.5
Roberto, F.F.6
Hinath, J.7
Brettin, T.8
Keim, P.9
-
39
-
-
84856239875
-
Genomic and SNP analyses demonstrate a distant separation of the hospital and community-associated clades of Enterococcus faecium
-
doi:10.1371/journal.pone.0030187
-
Galloway-Pena P, Roh JH, Latorre M, Qin X, Murray BE. 2012. Genomic and SNP analyses demonstrate a distant separation of the hospital and community-associated clades of Enterococcus faecium. PLoS One 7:e30187. doi:10.1371/journal.pone.0030187.
-
(2012)
PLoS One
, vol.7
-
-
Galloway-Pena, P.1
Roh, J.H.2
Latorre, M.3
Qin, X.4
Murray, B.E.5
-
40
-
-
71049152453
-
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer
-
Pearson T, Giffard P, Beckstrom-Sternberg S, Auerbach R, Hornstra H, Tuanyok A, Price EP, Glass MB, Leadem B, Beckstrom-Sternberg JS, Allan GJ, Foster JT, Wagner DM, Okinaka RT, Sim SH, Pearson O, Wu Z, Chang J, Kaul R, Hoffmaster AR, Brettin TS, Robison RA, Mayo M, Gee JE, Tan P, Currie BJ, Keim P. 2009. Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer. BMC Biol. 7:78.
-
(2009)
BMC Biol.
, vol.7
, pp. 78
-
-
Pearson, T.1
Giffard, P.2
Beckstrom-Sternberg, S.3
Auerbach, R.4
Hornstra, H.5
Tuanyok, A.6
Price, E.P.7
Glass, M.B.8
Leadem, B.9
Beckstrom-Sternberg, J.S.10
Allan, G.J.11
Foster, J.T.12
Wagner, D.M.13
Okinaka, R.T.14
Sim, S.H.15
Pearson, O.16
Wu, Z.17
Chang, J.18
Kaul, R.19
Hoffmaster, A.R.20
Brettin, T.S.21
Robison, R.A.22
Mayo, M.23
Gee, J.E.24
Tan, P.25
Currie, B.J.26
Keim, P.27
more..
-
41
-
-
0037381428
-
Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations
-
Lenski RE, Winkworth CL, Riley MA. 2003. Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations. J. Mol. Evol. 56:498-508.
-
(2003)
J. Mol. Evol.
, vol.56
, pp. 498-508
-
-
Lenski, R.E.1
Winkworth, C.L.2
Riley, M.A.3
-
42
-
-
0028825078
-
Expression of flagella and motility by Shigella
-
Giron JA. 1995. Expression of flagella and motility by Shigella. Mol. Microbiol. 18:63-75.
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 63-75
-
-
Giron, J.A.1
-
43
-
-
0034641731
-
Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics
-
Pupo GM, Lan RT, Reeves PR. 2000. Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics. Proc. Natl. Acad. Sci. U. S. A. 97:10567-10572.
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 10567-10572
-
-
Pupo, G.M.1
Lan, R.T.2
Reeves, P.R.3
-
44
-
-
70149099368
-
Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry
-
Fricke WF, McDermott PF, Mammel MK, Zhao S, Johnson TJ, Rasko DA, Fedorka-Cray PJ, Pedroso A, Whichard JM, Leclerc JE, White DG, Cebula TA, Ravel J. 2009. Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry. Appl. Environ. Microbiol. 75:5963-5971.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 5963-5971
-
-
Fricke, W.F.1
McDermott, P.F.2
Mammel, M.K.3
Zhao, S.4
Johnson, T.J.5
Rasko, D.A.6
Fedorka-Cray, P.J.7
Pedroso, A.8
Whichard, J.M.9
Leclerc, J.E.10
White, D.G.11
Cebula, T.A.12
Ravel, J.13
-
45
-
-
33847249975
-
Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors
-
Alexander RP, Zhulin IB. 2007. Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors. Proc. Natl. Acad. Sci. U. S. A. 104:2885-2890.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 2885-2890
-
-
Alexander, R.P.1
Zhulin, I.B.2
-
47
-
-
20444505242
-
Evolutionary changes of the flhDC flagellar master operon in Shigella strains
-
Tominaga A, Lan R, Reeves PR. 2005. Evolutionary changes of the flhDC flagellar master operon in Shigella strains. J. Bacteriol. 187: 4295-4302.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 4295-4302
-
-
Tominaga, A.1
Lan, R.2
Reeves, P.R.3
-
48
-
-
70349538976
-
Chemotaxis-like regulatory systems: unique roles in diverse bacteria
-
Kirby JR. 2009. Chemotaxis-like regulatory systems: unique roles in diverse bacteria. Annu. Rev. Microbiol. 63:45-59.
-
(2009)
Annu. Rev. Microbiol.
, vol.63
, pp. 45-59
-
-
Kirby, J.R.1
-
49
-
-
0017184872
-
Naturally occurring sites within the Shigella dysenteriae tryptophan operon severely limit tryptophan biosynthesis
-
Manson MD, Yanofsky C. 1976. Naturally occurring sites within the Shigella dysenteriae tryptophan operon severely limit tryptophan biosynthesis. J. Bacteriol. 126:668-678.
-
(1976)
J. Bacteriol.
, vol.126
, pp. 668-678
-
-
Manson, M.D.1
Yanofsky, C.2
-
50
-
-
0018250277
-
Naturally occurring promoter down mutation: nucleotide sequence of the trp promoter/operator/leader region of Shigella dysenteriae 16
-
Miozzari G, Yanofsky C. 1978. Naturally occurring promoter down mutation: nucleotide sequence of the trp promoter/operator/leader region of Shigella dysenteriae 16. Proc. Natl. Acad. Sci. U. S. A. 75:5580-5584.
-
(1978)
Proc. Natl. Acad. Sci. U. S. A.
, vol.75
, pp. 5580-5584
-
-
Miozzari, G.1
Yanofsky, C.2
-
51
-
-
77949391050
-
Thermosensing function of the Escherichia coli redox sensor Aer
-
Nishiyama S, Ohno S, Ohta N, Inoue Y, Fukuoka H, Ishijima A, Kawagishi I. 2010. Thermosensing function of the Escherichia coli redox sensor Aer. J. Bacteriol. 192:1740-1743.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 1740-1743
-
-
Nishiyama, S.1
Ohno, S.2
Ohta, N.3
Inoue, Y.4
Fukuoka, H.5
Ishijima, A.6
Kawagishi, I.7
-
52
-
-
84871012696
-
Opposite responses by different chemoreceptors set a tunable preference point in Escherichia coli pH taxis
-
Yang Y, Sourjik V. 2012. Opposite responses by different chemoreceptors set a tunable preference point in Escherichia coli pH taxis. Mol. Microbiol. 86:1482-1489.
-
(2012)
Mol. Microbiol.
, vol.86
, pp. 1482-1489
-
-
Yang, Y.1
Sourjik, V.2
-
53
-
-
84873819344
-
Chemoreceptors of Escherichia coli CFT073 play redundant roles in chemotaxis toward urine
-
doi:10.1371/journal.pone.0054133
-
Raterman EL, Welch RA. 2013. Chemoreceptors of Escherichia coli CFT073 play redundant roles in chemotaxis toward urine. PLoS One 8:e54133. doi:10.1371/journal.pone.0054133.
-
(2013)
PLoS One
, vol.8
-
-
Raterman, E.L.1
Welch, R.A.2
-
54
-
-
33646544356
-
Signaling interactions between the aerotaxis transducer Aer and heterologous chemoreceptors in Escherichia coli
-
Gosink KK, Buron-Barral MC, Parkinson JS. 2006. Signaling interactions between the aerotaxis transducer Aer and heterologous chemoreceptors in Escherichia coli. J. Bacteriol. 188:3487-3493.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3487-3493
-
-
Gosink, K.K.1
Buron-Barral, M.C.2
Parkinson, J.S.3
-
55
-
-
84856088937
-
Escherichia coli physiology and metabolism dictates adaptation to diverse host microenvironments
-
Alteri CJ, Mobley HLT. 2012. Escherichia coli physiology and metabolism dictates adaptation to diverse host microenvironments. Curr. Opin. Microbiol. 15:3-9.
-
(2012)
Curr. Opin. Microbiol.
, vol.15
, pp. 3-9
-
-
Alteri, C.J.1
Mobley, H.L.T.2
-
56
-
-
79960710161
-
Regu-lation of fructooligosaccharide metabolism in an extra-intestinal pathogenic Escherichia coli strain
-
Porcheron G, Kut E, Canepa S, Maurel MC, Schouler C. 2011. Regu-lation of fructooligosaccharide metabolism in an extra-intestinal pathogenic Escherichia coli strain. Mol. Microbiol. 81:717-733.
-
(2011)
Mol. Microbiol.
, vol.81
, pp. 717-733
-
-
Porcheron, G.1
Kut, E.2
Canepa, S.3
Maurel, M.C.4
Schouler, C.5
-
58
-
-
78751694018
-
PAS/poly-HAMP signalling in Aer-2, a soluble haem-based sensor
-
Watts KJ, Taylor BL, Johnson MS. 2011. PAS/poly-HAMP signalling in Aer-2, a soluble haem-based sensor. Mol. Microbiol. 79:686-699.
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 686-699
-
-
Watts, K.J.1
Taylor, B.L.2
Johnson, M.S.3
-
59
-
-
33646045061
-
Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: role of virulence factors and adherence to colonic cells
-
Nowrouzian FL, Adlerberth I, Wold AE. 2006. Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: role of virulence factors and adherence to colonic cells. Microbes Infect. 8:834-840.
-
(2006)
Microbes Infect.
, vol.8
, pp. 834-840
-
-
Nowrouzian, F.L.1
Adlerberth, I.2
Wold, A.E.3
-
60
-
-
80052643615
-
Australopithecus sediba at 1.977 Ma and implications for the origins of the genus Homo
-
Pickering R, Dirks PHGM, Jinnah Z, de Ruiter DJ, Churchill SE, Herries AIR, Woodhead JD, Hellstrom JC, Berger LR. 2011. Australopithecus sediba at 1.977 Ma and implications for the origins of the genus Homo. Science 333:1421-1423.
-
(2011)
Science
, vol.333
, pp. 1421-1423
-
-
Pickering, R.1
Dirks, P.H.G.M.2
Jinnah, Z.3
de Ruiter, D.J.4
Churchill, S.E.5
Herries, A.I.R.6
Woodhead, J.D.7
Hellstrom, J.C.8
Berger, L.R.9
|