메뉴 건너뛰기




Volumn 51, Issue 8, 2013, Pages 2625-2632

Multilocus sequence analysis provides insights into molecular epidemiology of Chlamydia pecorum infections in Australian sheep, cattle, and koalas

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIAL TRANSMISSION; BLINDNESS; CATTLE; CHLAMYDIA PECORUM; CONTROLLED STUDY; ENCEPHALOMYELITIS; EPIDEMIOLOGICAL DATA; GENE FREQUENCY; GENE LOCUS; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; KERATOCONJUNCTIVITIS; KOALA; MICROBIAL DIVERSITY; MOLECULAR EPIDEMIOLOGY; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; OMPA GENE; OPEN READING FRAME; PHYLOGENETIC TREE; PHYLOGENY; POLYMERASE CHAIN REACTION; POPULATION DYNAMICS; PREVALENCE; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SHEEP; SINGLE NUCLEOTIDE POLYMORPHISM; URINARY TRACT INFECTION;

EID: 84880621678     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00992-13     Document Type: Article
Times cited : (50)

References (56)
  • 1
    • 77649120197 scopus 로고    scopus 로고
    • Recent advances in the understanding of Chlamydophila pecorum infections, sixteen years after it was named as the fourth species of the Chlamydiaceae family
    • doi:10.1051/vetres/2009075
    • Mohamad KY, Rodolakis A. 2010. Recent advances in the understanding of Chlamydophila pecorum infections, sixteen years after it was named as the fourth species of the Chlamydiaceae family. Vet. Res. 41:27. doi:10.1051/vetres/ 2009075.
    • (2010) Vet. Res. , vol.41 , pp. 27
    • Mohamad, K.Y.1    Rodolakis, A.2
  • 2
    • 0038814326 scopus 로고    scopus 로고
    • Animal chlamydioses and zoonotic implications
    • Longbottom D, Coulter LJ. 2003. Animal chlamydioses and zoonotic implications. J. Comp. Pathol. 128:217-244.
    • (2003) J. Comp. Pathol. , vol.128 , pp. 217-244
    • Longbottom, D.1    Coulter, L.J.2
  • 3
    • 84892971575 scopus 로고    scopus 로고
    • Recent advances in understanding the biology, epidemiology and control of chlamydial infections in koalas
    • pii:S0378-1135(13)00140-5. doi:10.1016/j.vetmic.2013.02.026
    • Polkinghorne A, Hanger J, Timms P. 2013. Recent advances in understanding the biology, epidemiology and control of chlamydial infections in koalas. Vet. Microbiol. pii:S0378-1135(13)00140-5. doi:10.1016/j.vetmic.2013.02.026.
    • (2013) Vet. Microbiol.
    • Polkinghorne, A.1    Hanger, J.2    Timms, P.3
  • 4
    • 0032998320 scopus 로고    scopus 로고
    • Epizootiology of Chlamydia infections in two free-range koala populations
    • Jackson M, White N, Giffard P, Timms P. 1999. Epizootiology of Chlamydia infections in two free-range koala populations. Vet. Microbiol. 65:255-264.
    • (1999) Vet. Microbiol. , vol.65 , pp. 255-264
    • Jackson, M.1    White, N.2    Giffard, P.3    Timms, P.4
  • 5
    • 0027373032 scopus 로고
    • Comparison of type i and type II Chlamydia psittaci strains infecting koalas (Phascolarctos cinereus)
    • Girjes AA, Hugall A, Graham DM, McCaul TF, Lavin MF. 1993. Comparison of type I and type II Chlamydia psittaci strains infecting koalas (Phascolarctos cinereus). Vet. Microbiol. 37:65-83.
    • (1993) Vet. Microbiol. , vol.37 , pp. 65-83
    • Girjes, A.A.1    Hugall, A.2    Graham, D.M.3    McCaul, T.F.4    Lavin, M.F.5
  • 6
    • 0021769075 scopus 로고
    • Chlamydia infection and infertility in the female koala (Phascolarctos cinereus)
    • doi:10.1136/vr.115.25-26.655
    • McColl KA, Martin RW, Gleeson LJ, Handasyde KA, Lee AK. 1984. Chlamydia infection and infertility in the female koala (Phascolarctos cinereus). Vet. Rec. 115:655. doi:10.1136/vr.115.25-26.655.
    • (1984) Vet. Rec. , vol.115 , pp. 655
    • McColl, K.A.1    Martin, R.W.2    Gleeson, L.J.3    Handasyde, K.A.4    Lee, A.K.5
  • 7
    • 0042204739 scopus 로고
    • Sporadic bovine encephalomyelitis (Buss disease)
    • McNutt SH, Waller EF. 1940. Sporadic bovine encephalomyelitis (Buss disease). Cornell Vet. 30:437-448.
    • (1940) Cornell Vet. , vol.30 , pp. 437-448
    • McNutt, S.H.1    Waller, E.F.2
  • 8
    • 0037388635 scopus 로고    scopus 로고
    • Quantitative detection of Chlamydia psittaci and C. pecorum by highsensitivity real-time PCR reveals high prevalence of vaginal infection in cattle
    • DeGraves FJ, Gao D, Hehnen HR, Schlapp T, Kaltenboeck B. 2003. Quantitative detection of Chlamydia psittaci and C. pecorum by highsensitivity real-time PCR reveals high prevalence of vaginal infection in cattle. J. Clin. Microbiol. 41:1726-1729.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 1726-1729
    • Degraves, F.J.1    Gao, D.2    Hehnen, H.R.3    Schlapp, T.4    Kaltenboeck, B.5
  • 11
    • 80051982391 scopus 로고    scopus 로고
    • Chlamydiaceae infections in pig
    • doi:10.1186/1297-9716-42-29
    • Schautteet K, Vanrompay D. 2011. Chlamydiaceae infections in pig. Vet. Res. 42:29. doi:10.1186/1297-9716-42-29.
    • (2011) Vet. Res. , vol.42 , pp. 29
    • Schautteet, K.1    Vanrompay, D.2
  • 12
    • 84866395120 scopus 로고    scopus 로고
    • Asymptomatic endemic Chlamydia pecorum infections reduce growth rates in calves by up to 48 percent
    • doi:10.1371/journal.pone.0044961
    • Poudel A, Elsasser TH, Rahman KhS, Chowdhury EU, Kaltenboeck B. 2012. Asymptomatic endemic Chlamydia pecorum infections reduce growth rates in calves by up to 48 percent. PLoS One 7:e44961. doi:10.1371/journal.pone.0044961.
    • (2012) PLoS One , vol.7
    • Poudel, A.1    Elsasser, T.H.2    Rahman Kh, S.3    Chowdhury, E.U.4    Kaltenboeck, B.5
  • 13
    • 10844238740 scopus 로고    scopus 로고
    • High prevalence of natural Chlamydophila species infection in calves
    • Jee J, Degraves FJ, Kim T, Kaltenboeck B. 2004. High prevalence of natural Chlamydophila species infection in calves. J. Clin. Microbiol. 42: 5664-5672.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 5664-5672
    • Jee, J.1    Degraves, F.J.2    Kim, T.3    Kaltenboeck, B.4
  • 14
    • 84880576040 scopus 로고    scopus 로고
    • Arthritis in sheep
    • District Veterinarian's Association, Dubbo, New South Wales, Australia
    • Watt B. 2010. Arthritis in sheep, p 109-113. In Proceedings of the 92nd District Veterinarian's Conference. District Veterinarian's Association, Dubbo, New South Wales, Australia.
    • (2010) Proceedings of the 92nd District Veterinarian's Conference , pp. 109-113
    • Watt, B.1
  • 15
    • 80052842569 scopus 로고    scopus 로고
    • Chlamydiaceae in cattle: Commensals, trigger organisms, or pathogens?
    • Reinhold P, Sachse K, Kaltenboeck B. 2011. Chlamydiaceae in cattle: commensals, trigger organisms, or pathogens? Vet. J. 189:257-267.
    • (2011) Vet. J. , vol.189 , pp. 257-267
    • Reinhold, P.1    Sachse, K.2    Kaltenboeck, B.3
  • 16
    • 84880574432 scopus 로고    scopus 로고
    • A case of sporadic bovine encephalomyelitis (SBE) in Hume LHPA
    • District Veterinarian's Association, Dubbo, New South Wales, Australia
    • Pitman B. 2010. A case of sporadic bovine encephalomyelitis (SBE) in Hume LHPA, p 114-115. In Proceedings of the 92nd District Veterinarian's Conference. District Veterinarian's Association, Dubbo, New South Wales, Australia.
    • (2010) Proceedings of the 92nd District Veterinarian's Conference , pp. 114-115
    • Pitman, B.1
  • 17
    • 0031067430 scopus 로고    scopus 로고
    • Serological survey for antibodies to infectious agents in beef cattle in northern South Australia
    • Durham PJ, Paine GD. 1997. Serological survey for antibodies to infectious agents in beef cattle in northern South Australia. Aust. Vet. J. 75: 139-140.
    • (1997) Aust. Vet. J. , vol.75 , pp. 139-140
    • Durham, P.J.1    Paine, G.D.2
  • 18
    • 0034695526 scopus 로고    scopus 로고
    • Emerging infectious diseases of wildlife-threats to biodiversity and human health
    • Daszak P, Cunningham AA, Hyatt AD. 2000. Emerging infectious diseases of wildlife-threats to biodiversity and human health. Science 287: 443-449.
    • (2000) Science , vol.287 , pp. 443-449
    • Daszak, P.1    Cunningham, A.A.2    Hyatt, A.D.3
  • 19
    • 34748881849 scopus 로고    scopus 로고
    • Infection and disease in reservoir and spillover hosts: Determinants of pathogen emergence
    • Daniels PW, Halpin K, Hyatt A, Middleton D. 2007. Infection and disease in reservoir and spillover hosts: determinants of pathogen emergence. Curr. Top. Microbiol. Immunol. 315:113-131.
    • (2007) Curr. Top. Microbiol. Immunol. , vol.315 , pp. 113-131
    • Daniels, P.W.1    Halpin, K.2    Hyatt, A.3    Middleton, D.4
  • 20
    • 0016029866 scopus 로고
    • Isolation of a Chlamydia from cases of keratoconjunctivitis in koalas
    • Cockram FA, Jackson AR. 1974. Isolation of a Chlamydia from cases of keratoconjunctivitis in koalas. Aust. Vet. J. 50:82-83.
    • (1974) Aust. Vet. J. , vol.50 , pp. 82-83
    • Cockram, F.A.1    Jackson, A.R.2
  • 21
    • 0029858893 scopus 로고    scopus 로고
    • Outer membrane protein 2 gene sequences indicate that Chlamydia pecorum and Chlamydia pneumoniae cause infections in koalas
    • Glassick T, Giffard P, Timms P. 1996. Outer membrane protein 2 gene sequences indicate that Chlamydia pecorum and Chlamydia pneumoniae cause infections in koalas. Syst. Appl. Microbiol. 19:457-464.
    • (1996) Syst. Appl. Microbiol. , vol.19 , pp. 457-464
    • Glassick, T.1    Giffard, P.2    Timms, P.3
  • 22
    • 0030746529 scopus 로고    scopus 로고
    • Outer membrane protein A gene sequencing demonstrates the polyphyletic nature of koala Chlamydia pecorum isolates
    • Jackson M, Giffard P, Timms P. 1997. Outer membrane protein A gene sequencing demonstrates the polyphyletic nature of koala Chlamydia pecorum isolates. Syst. Appl. Microbiol. 20:187-200.
    • (1997) Syst. Appl. Microbiol. , vol.20 , pp. 187-200
    • Jackson, M.1    Giffard, P.2    Timms, P.3
  • 24
    • 79955106430 scopus 로고    scopus 로고
    • Novel molecular markers of Chlamydia pecorum genetic diversity in the koala (Phascolarctos cinereus)
    • doi:10.1186/1471-2180-11-77
    • Marsh J, Kollipara A, Timms P, Polkinghorne A. 2011. Novel molecular markers of Chlamydia pecorum genetic diversity in the koala (Phascolarctos cinereus). BMC Microbiol. 11:77. doi:10.1186/1471-2180-11-77.
    • (2011) BMC Microbiol. , vol.11 , pp. 77
    • Marsh, J.1    Kollipara, A.2    Timms, P.3    Polkinghorne, A.4
  • 27
    • 84856023483 scopus 로고    scopus 로고
    • Nucleotide and phylogenetic analyses of the Chlamydia trachomatis ompA gene indicates it is a hotspot for mutation
    • doi:10.1186/1756-0500-5-53
    • Brunelle BW, Sensabaugh GF. 2012. Nucleotide and phylogenetic analyses of the Chlamydia trachomatis ompA gene indicates it is a hotspot for mutation. BMC Res. Notes 5:53. doi:10.1186/1756-0500-5-53.
    • (2012) BMC Res. Notes , vol.5 , pp. 53
    • Brunelle, B.W.1    Sensabaugh, G.F.2
  • 30
    • 40949104851 scopus 로고    scopus 로고
    • Multi locus sequence typing of Chlamydiales: Clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis
    • doi:10.1186/1471-2180-8-42
    • Pannekoek Y, Morelli G, Kusecek B, Morré S, Ossewaarde J, Langerak A, van der Ende A. 2008. Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis. BMC Microbiol. 8:42. doi:10.1186/1471-2180-8-42.
    • (2008) BMC Microbiol. , vol.8 , pp. 42
    • Pannekoek, Y.1    Morelli, G.2    Kusecek, B.3    Morré, S.4    Ossewaarde, J.5    Langerak, A.6    Van Der Ende, A.7
  • 32
    • 33750290454 scopus 로고    scopus 로고
    • Multilocus sequence typing of bacteria
    • Maiden MC. 2006. Multilocus sequence typing of bacteria. Annu. Rev. Microbiol. 60:561-588.
    • (2006) Annu. Rev. Microbiol. , vol.60 , pp. 561-588
    • Maiden, M.C.1
  • 33
    • 2942679276 scopus 로고    scopus 로고
    • Small change: Keeping pace with microevolution
    • Feil EJ. 2004. Small change: keeping pace with microevolution. Nat. Rev. Microbiol. 2:483-495.
    • (2004) Nat. Rev. Microbiol. , vol.2 , pp. 483-495
    • Feil, E.J.1
  • 34
    • 84862576263 scopus 로고    scopus 로고
    • Multi-locus sequence analysis (MLSA) of Edwardsiella tarda isolates from fish
    • Abayneh T, Colquhoun DJ, Sørum H. 2012. Multi-locus sequence analysis (MLSA) of Edwardsiella tarda isolates from fish. Vet. Microbiol. 158: 367-375.
    • (2012) Vet. Microbiol. , vol.158 , pp. 367-375
    • Abayneh, T.1    Colquhoun, D.J.2    Sørum, H.3
  • 35
    • 78650220709 scopus 로고    scopus 로고
    • Phylogenetic evaluation of the 'Typhimurium' complex of Salmonella strains using a seven-gene multi-locus sequence analysis
    • Bell RL, González-Escalona N, Stones R, Brown EW. 2011. Phylogenetic evaluation of the 'Typhimurium' complex of Salmonella strains using a seven-gene multi-locus sequence analysis. Infect. Genet. Evol. 11:83-91.
    • (2011) Infect. Genet. Evol. , vol.11 , pp. 83-91
    • Bell, R.L.1    González-Escalona, N.2    Stones, R.3    Brown, E.W.4
  • 36
    • 53849111617 scopus 로고    scopus 로고
    • Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens
    • Achtman M. 2008. Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. Annu. Rev. Microbiol. 62:53-70.
    • (2008) Annu. Rev. Microbiol. , vol.62 , pp. 53-70
    • Achtman, M.1
  • 38
    • 78650827616 scopus 로고    scopus 로고
    • BIGSdb: Scalable analysis of bacterial genome variation at the population level
    • doi:10.1186/1471-2105-11-595
    • Jolley KA, Maiden MCJ. 2010. BIGSdb: scalable analysis of bacterial genome variation at the population level. BMC Bioinformatics 11:595. doi:10.1186/1471-2105-11-595.
    • (2010) BMC Bioinformatics , vol.11 , pp. 595
    • Jolley, K.A.1    Maiden, M.C.J.2
  • 39
    • 80053089144 scopus 로고    scopus 로고
    • Using quantitative polymerase chain reaction to correlate Chlamydia pecorum infectious load with ocular, urinary and reproductive tract disease in the koala (Phascolarctos cinereus)
    • Wan C, Loader J, Hanger J, Beagley KW, Timms P, Polkinghorne A. 2011. Using quantitative polymerase chain reaction to correlate Chlamydia pecorum infectious load with ocular, urinary and reproductive tract disease in the koala (Phascolarctos cinereus). Aust. Vet. J. 89:409-412.
    • (2011) Aust. Vet. J. , vol.89 , pp. 409-412
    • Wan, C.1    Loader, J.2    Hanger, J.3    Beagley, K.W.4    Timms, P.5    Polkinghorne, A.6
  • 41
    • 65649117685 scopus 로고    scopus 로고
    • DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
    • Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
    • (2009) Bioinformatics , vol.25 , pp. 1451-1452
    • Librado, P.1    Rozas, J.2
  • 42
    • 84864453108 scopus 로고    scopus 로고
    • JModelTest 2: More models, new heuristics and parallel computing
    • doi: 10.1038/nmeth.2109
    • Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat. Methods 9:772. doi: 10.1038/nmeth.2109.
    • (2012) Nat. Methods , vol.9 , pp. 772
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 43
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck JP, Ronquist F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 45
    • 0036720020 scopus 로고    scopus 로고
    • The Ka/Ks ratio: Diagnosing the form of sequence evolution
    • Hurst LD. 2002. The Ka/Ks ratio: diagnosing the form of sequence evolution. Trends Genet. 18:486-487.
    • (2002) Trends Genet. , vol.18 , pp. 486-487
    • Hurst, L.D.1
  • 48
    • 79957454213 scopus 로고    scopus 로고
    • Chlamydial infection and disease in the koala
    • Timms P. 2005. Chlamydial infection and disease in the koala. Microbiol. Aust. 26:65-68.
    • (2005) Microbiol. Aust. , vol.26 , pp. 65-68
    • Timms, P.1
  • 49
    • 36349028084 scopus 로고    scopus 로고
    • Genetic diversity of the obligate intracellular bacterium Chlamydophila pneumoniae by genome-wide analysis of single nucleotide polymorphisms: Evidence for highly clonal population structure
    • doi:10.1186/1471-2164-8-355
    • Rattei T, Ott S, Gutacker M, Rupp J, Maass M, Schreiber S, Solbach W, Wirth T, Gieffers J. 2007. Genetic diversity of the obligate intracellular bacterium Chlamydophila pneumoniae by genome-wide analysis of single nucleotide polymorphisms: evidence for highly clonal population structure. BMC Genomics 8:355. doi:10.1186/1471-2164-8-355.
    • (2007) BMC Genomics , vol.8 , pp. 355
    • Rattei, T.1    Ott, S.2    Gutacker, M.3    Rupp, J.4    Maass, M.5    Schreiber, S.6    Solbach, W.7    Wirth, T.8    Gieffers, J.9
  • 50
    • 2542465118 scopus 로고    scopus 로고
    • Chlamydial infections of domestic ruminants and swine: New nomenclature and new knowledge
    • Longbottom D. 2004. Chlamydial infections of domestic ruminants and swine: new nomenclature and new knowledge. Vet. J. 168:9-11.
    • (2004) Vet. J. , vol.168 , pp. 9-11
    • Longbottom, D.1
  • 52
    • 0027510211 scopus 로고
    • Structures of and allelic diversity and relationships among the major outer membrane protein (ompA) genes of the four chlamydial species
    • Kaltenboeck B, Kousoulas KG, Storz J. 1993. Structures of and allelic diversity and relationships among the major outer membrane protein (ompA) genes of the four chlamydial species. J. Bacteriol. 175:487-502.
    • (1993) J. Bacteriol. , vol.175 , pp. 487-502
    • Kaltenboeck, B.1    Kousoulas, K.G.2    Storz, J.3
  • 53
    • 33750219172 scopus 로고    scopus 로고
    • Speciation genetics: Evolving approaches
    • Noor MA, Feder JL. 2006. Speciation genetics: evolving approaches. Nat. Rev. Genet. 7:851-861.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 851-861
    • Noor, M.A.1    Feder, J.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.