메뉴 건너뛰기




Volumn 49, Issue 6, 2013, Pages 767-776

Ammonia-oxidizing archaea are more important than ammonia-oxidizing bacteria in nitrification and NO3--N loss in acidic soil of sloped land

Author keywords

Ammonia oxidizing archaea; Ammonia oxidizing bacteria; Nitrification; NO3 N loss

Indexed keywords

ACID SOIL; AGRICULTURAL ECOSYSTEM; COMMUNITY COMPOSITION; LAND USE PLANNING; NITRIFICATION; NITROGEN OXIDES; PLANTATION; POLYMERASE CHAIN REACTION; PROKARYOTE; QUANTITATIVE ANALYSIS; TEA;

EID: 84880343339     PISSN: 01782762     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00374-012-0767-1     Document Type: Article
Times cited : (46)

References (43)
  • 1
    • 0036672093 scopus 로고    scopus 로고
    • Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysis
    • Alfreider A, Vogt C, Babel W (2002) Microbial diversity in an in situ reactor system treating monochlorobenzene contaminated groundwater as revealed by 16S ribosomal DNA analysis. Syst Appl Microbiol 25: 232-240.
    • (2002) Syst Appl Microbiol , vol.25 , pp. 232-240
    • Alfreider, A.1    Vogt, C.2    Babel, W.3
  • 2
    • 78149470564 scopus 로고    scopus 로고
    • Impact of long-term fertilization on the composition of denitrifier communities based on nitrite reductase analyses in a paddy soil
    • Chen Z, Luo XQ, Hu RG, Wu MN, Wu JS, Wei WX (2010) Impact of long-term fertilization on the composition of denitrifier communities based on nitrite reductase analyses in a paddy soil. Microb Ecol 60: 850-861.
    • (2010) Microb Ecol , vol.60 , pp. 850-861
    • Chen, Z.1    Luo, X.Q.2    Hu, R.G.3    Wu, M.N.4    Wu, J.S.5    Wei, W.X.6
  • 3
    • 79952573590 scopus 로고    scopus 로고
    • Abundance and community structure of ammonia-oxidizing archaea and bacteria in an acid paddy soil
    • Chen X, Zhang LM, Shen JP, Wei WX, He JZ (2011) Abundance and community structure of ammonia-oxidizing archaea and bacteria in an acid paddy soil. Biol Fertil Soils 47: 323-331.
    • (2011) Biol Fertil Soils , vol.47 , pp. 323-331
    • Chen, X.1    Zhang, L.M.2    Shen, J.P.3    Wei, W.X.4    He, J.Z.5
  • 4
    • 70450207493 scopus 로고    scopus 로고
    • Nitrate leaching from grazed grassland as affected by a nitrification inhibitor, dicyandiamide, and relationships with ammonia oxidizing bacterial and archaea
    • Di HJ, Cameron KC, Shen JP, He JZ, Winefield CS (2009a) Nitrate leaching from grazed grassland as affected by a nitrification inhibitor, dicyandiamide, and relationships with ammonia oxidizing bacterial and archaea. Soil Use Manag 25: 454-461.
    • (2009) Soil Use Manag , vol.25 , pp. 454-461
    • Di, H.J.1    Cameron, K.C.2    Shen, J.P.3    He, J.Z.4    Winefield, C.S.5
  • 7
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive Earth's biogeochemical cycles
    • Falkowski PG, Fenchel T, Delong EF (2008) The microbial engines that drive Earth's biogeochemical cycles. Science 320: 1034-1039.
    • (2008) Science , vol.320 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    Delong, E.F.3
  • 9
    • 38349190507 scopus 로고    scopus 로고
    • An Earth-system perspective of the global nitrogen cycle
    • Gruber N, Galloway JN (2008) An Earth-system perspective of the global nitrogen cycle. Nature 451: 293-296.
    • (2008) Nature , vol.451 , pp. 293-296
    • Gruber, N.1    Galloway, J.N.2
  • 10
    • 78049277482 scopus 로고    scopus 로고
    • Archaea rather than bacteria control nitrification in two agricultural acidic soils
    • Gubry-Rangin C, Nicol GW, Prosser JI (2010) Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol 74: 566-74.
    • (2010) FEMS Microbiol Ecol , vol.74 , pp. 566-574
    • Gubry-Rangin, C.1    Nicol, G.W.2    Prosser, J.I.3
  • 11
    • 34547686149 scopus 로고    scopus 로고
    • Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices
    • He JZ, Shen JP, Zhang LM, Zhu YG, Zheng YM, Xu MG, Di HJ (2007) Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices. Environ Microbiol 9: 2364-2374.
    • (2007) Environ Microbiol , vol.9 , pp. 2364-2374
    • He, J.Z.1    Shen, J.P.2    Zhang, L.M.3    Zhu, Y.G.4    Zheng, Y.M.5    Xu, M.G.6    Di, H.J.7
  • 12
    • 1942500664 scopus 로고
    • Rapid procedure for determination of nitrogen in soil by Kieldahl method
    • Honda C (1962) Rapid procedure for determination of nitrogen in soil by Kieldahl method. J Sci Soil Manure 33: 195-200.
    • (1962) J Sci Soil Manure , vol.33 , pp. 195-200
    • Honda, C.1
  • 13
    • 0035658361 scopus 로고    scopus 로고
    • Biological dinitrogen fixation and soil microbial biomass carbon as influenced by free-air carbon dioxide enrichment (FACE) at three levels of nitrogen fertilization in a paddy field
    • Hoque MM, Inubushi K, Miura S, Kobayashi K, Kim HY, Okada M, Yabashi S (2001) Biological dinitrogen fixation and soil microbial biomass carbon as influenced by free-air carbon dioxide enrichment (FACE) at three levels of nitrogen fertilization in a paddy field. Biol Fertil Soils 34: 453-459.
    • (2001) Biol Fertil Soils , vol.34 , pp. 453-459
    • Hoque, M.M.1    Inubushi, K.2    Miura, S.3    Kobayashi, K.4    Kim, H.Y.5    Okada, M.6    Yabashi, S.7
  • 14
    • 79952106943 scopus 로고    scopus 로고
    • Geographical structure of soil microbial communities in northern Japan: effects of distance, land use type and soil properties
    • Hossain Z, Sugiyama S (2011) Geographical structure of soil microbial communities in northern Japan: effects of distance, land use type and soil properties. Eur J Soil Biol 47: 88-94.
    • (2011) Eur J Soil Biol , vol.47 , pp. 88-94
    • Hossain, Z.1    Sugiyama, S.2
  • 15
    • 67649939034 scopus 로고    scopus 로고
    • Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil
    • Jia ZJ, Conrad R (2009) Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. Environ Manag 11: 1658-1671.
    • (2009) Environ Manag , vol.11 , pp. 1658-1671
    • Jia, Z.J.1    Conrad, R.2
  • 16
    • 0004576789 scopus 로고
    • Soil testing in the United States
    • Jones JB (1973) Soil testing in the United States. Soil Sci Plant Anal 4: 307-322.
    • (1973) Soil Sci Plant Anal , vol.4 , pp. 307-322
    • Jones, J.B.1
  • 17
    • 0035040382 scopus 로고    scopus 로고
    • Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics
    • Kitts CL (2001) Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics. Curr Issues Intest Microbiol 2: 17-25.
    • (2001) Curr Issues Intest Microbiol , vol.2 , pp. 17-25
    • Kitts, C.L.1
  • 19
    • 34047139546 scopus 로고    scopus 로고
    • Beijing: China Agriculture Science and Technology Press
    • Lu RK (2000) Agricultural chemical analysis method of soil. China Agriculture Science and Technology Press, Beijing, pp 107-108.
    • (2000) Agricultural Chemical Analysis Method of Soil , pp. 107-108
    • Lu, R.K.1
  • 20
    • 54049088109 scopus 로고    scopus 로고
    • Soil fertility in relation to slope position and agricultural land use: a case study of Umbulo Catchment in Southern Ethiopia
    • Moges A, Holden NM (2008) Soil fertility in relation to slope position and agricultural land use: a case study of Umbulo Catchment in Southern Ethiopia. Environ Manag 42: 753-763.
    • (2008) Environ Manag , vol.42 , pp. 753-763
    • Moges, A.1    Holden, N.M.2
  • 21
    • 52949137846 scopus 로고    scopus 로고
    • The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
    • Nicol GW, Leininger S, Schleper C, Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Manag 10: 2966-2978.
    • (2008) Environ Manag , vol.10 , pp. 2966-2978
    • Nicol, G.W.1    Leininger, S.2    Schleper, C.3    Prosser, J.I.4
  • 23
    • 84880395358 scopus 로고    scopus 로고
    • Effects of different utilization model on soil water redistributions, runoff and nutrition loss on red sloping lands
    • Peng N, Wang KF, Xie XL, Hu S (2008) Effects of different utilization model on soil water redistributions, runoff and nutrition loss on red sloping lands. Res Soil Water Conserv 15: 207-213.
    • (2008) Res Soil Water Conserv , vol.15 , pp. 207-213
    • Peng, N.1    Wang, K.F.2    Xie, X.L.3    Hu, S.4
  • 24
    • 79959289950 scopus 로고    scopus 로고
    • The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology
    • Pester M, Schleper C, Wagner M (2011) The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 14: 300-306.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 300-306
    • Pester, M.1    Schleper, C.2    Wagner, M.3
  • 25
    • 0023476956 scopus 로고
    • Measurement of soil microbial biomass provides an early indication in total soil organic matter due to straw incorporation
    • Powlson DS, Brookes PC, Christensen B (1987) Measurement of soil microbial biomass provides an early indication in total soil organic matter due to straw incorporation. Soil Biol Biochem 19: 159-164.
    • (1987) Soil Biol Biochem , vol.19 , pp. 159-164
    • Powlson, D.S.1    Brookes, P.C.2    Christensen, B.3
  • 26
    • 0034466757 scopus 로고    scopus 로고
    • Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys
    • Purkhold U, Pommerening-Röser A, Juretschko S, Schmid MC, Koops HP, Wagner M (2000) Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys. Appl Environ Microbiol 66: 5368-5382.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5368-5382
    • Purkhold, U.1    Pommerening-Röser, A.2    Juretschko, S.3    Schmid, M.C.4    Koops, H.P.5    Wagner, M.6
  • 27
    • 3743100218 scopus 로고
    • Amount of runoff and soil losses from various land-use sampling plots in Sakolnakorn Province, Thailand
    • In: Swanson YH, Bernier PY, Woodward PD (eds). Wallingford, UK
    • Putjaroon W, Pongboon K (1987) Amount of runoff and soil losses from various land-use sampling plots in Sakolnakorn Province, Thailand. In: Swanson YH, Bernier PY, Woodward PD (eds) Forest hydrology and watershed management. Proc Vancouver Symp, Wallingford, UK, pp 231-238.
    • (1987) Forest hydrology and watershed management. Proc Vancouver Symp , pp. 231-238
    • Putjaroon, W.1    Pongboon, K.2
  • 28
    • 77950571122 scopus 로고    scopus 로고
    • Responses of ammonia-oxidizing bacterial and archaeal populations to organic nitrogen amendments in low-nutrient groundwater
    • Reed DW, Smith JM, Francis CA, Fujita Y (2010) Responses of ammonia-oxidizing bacterial and archaeal populations to organic nitrogen amendments in low-nutrient groundwater. Appl Environ Microbiol 76: 2517-2523.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 2517-2523
    • Reed, D.W.1    Smith, J.M.2    Francis, C.A.3    Fujita, Y.4
  • 29
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe JH, Witzel KP, Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63: 4704-4712.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.P.2    Liesack, W.3
  • 30
    • 42149108694 scopus 로고    scopus 로고
    • Diversity and spatio-temporal distribution of ammonia-oxidizing archaea and bacteria in sediments of the Westerschelde estuary
    • Sahan E, Muyzer G (2008) Diversity and spatio-temporal distribution of ammonia-oxidizing archaea and bacteria in sediments of the Westerschelde estuary. FEMS Microbiol Rev 64: 175-186.
    • (2008) FEMS Microbiol Rev , vol.64 , pp. 175-186
    • Sahan, E.1    Muyzer, G.2
  • 31
    • 77956095401 scopus 로고    scopus 로고
    • Ammonia oxidation: different niches for bacteria and archaea?
    • Schleper C (2010) Ammonia oxidation: different niches for bacteria and archaea? ISME J 4: 1092-1094.
    • (2010) ISME J , vol.4 , pp. 1092-1094
    • Schleper, C.1
  • 32
    • 85103230076 scopus 로고
    • Autotrophic nitrifying bacteria
    • R. W. Weaver, J. S. Angle, and P. S. Bottomley (Eds.), Madison, WI: Soil Science Society of America
    • Schmidt EL, Belser LM (1994) Autotrophic nitrifying bacteria. In: Weaver RW, Angle JS, Bottomley PS (eds) Method of soil analysis, part 2. Microbiological and biochemical properties. Soil Science Society of America, Madison, WI, pp 159-177.
    • (1994) Method of Soil Analysis, Part 2. Microbiological and Biochemical Properties , pp. 159-177
    • Schmidt, E.L.1    Belser, L.M.2
  • 33
    • 84862774283 scopus 로고    scopus 로고
    • Temporal and spatial distributions of ammonia-oxidizing archaea and bacteria and their ratio as an indicator of oligotrophic conditions in natural wetlands
    • Sim A, Horton J, Gajaraj S, McIntosh S, Miles RJ, Mueller R, Reed R, Hua ZQ (2012) Temporal and spatial distributions of ammonia-oxidizing archaea and bacteria and their ratio as an indicator of oligotrophic conditions in natural wetlands. Water Res 46: 4121-4129.
    • (2012) Water Res , vol.46 , pp. 4121-4129
    • Sim, A.1    Horton, J.2    Gajaraj, S.3    McIntosh, S.4    Miles, R.J.5    Mueller, R.6    Reed, R.7    Hua, Z.Q.8
  • 34
    • 41849095617 scopus 로고    scopus 로고
    • Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms
    • Tourna M, Freitag TE, Nicol GW, Prosser JI (2008) Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environ Microbiol 10: 1357-1364.
    • (2008) Environ Microbiol , vol.10 , pp. 1357-1364
    • Tourna, M.1    Freitag, T.E.2    Nicol, G.W.3    Prosser, J.I.4
  • 35
    • 28644435323 scopus 로고    scopus 로고
    • Novel genes or nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
    • Treusch AH, Leininger S, Kletzin A, Schuster SC, Klenk HP, Schleper C (2005) Novel genes or nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. Environ Microbiol 7: 1985-1995.
    • (2005) Environ Microbiol , vol.7 , pp. 1985-1995
    • Treusch, A.H.1    Leininger, S.2    Kletzin, A.3    Schuster, S.C.4    Klenk, H.P.5    Schleper, C.6
  • 36
    • 0034864780 scopus 로고    scopus 로고
    • Soil nutrients in relation to land use and slope position in the semi-arid small catchment on the Loess Plateau in China
    • Wang J, Fu BJ, Qiu Y, Chen LD (2001) Soil nutrients in relation to land use and slope position in the semi-arid small catchment on the Loess Plateau in China. J Arid Environ 48: 537-550.
    • (2001) J Arid Environ , vol.48 , pp. 537-550
    • Wang, J.1    Fu, B.J.2    Qiu, Y.3    Chen, L.D.4
  • 37
    • 0036135250 scopus 로고    scopus 로고
    • Grassland management regimens reduce small-scale heterogeneity and species diversity of β-proteobacterial ammonia oxidizer populations
    • Webster G, Embley TM, Prosser JI (2002) Grassland management regimens reduce small-scale heterogeneity and species diversity of β-proteobacterial ammonia oxidizer populations. Appl Environ Microbiol 68: 20-30.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 20-30
    • Webster, G.1    Embley, T.M.2    Prosser, J.I.3
  • 38
    • 84880390811 scopus 로고    scopus 로고
    • Observation studies on water and soil loss in the process of rainfall on the slope lands of red soil in north Hunan
    • Xie XL, Wang KR (2003) Observation studies on water and soil loss in the process of rainfall on the slope lands of red soil in north Hunan. J Mt Sci 21: 466-472.
    • (2003) J Mt Sci , vol.21 , pp. 466-472
    • Xie, X.L.1    Wang, K.R.2
  • 39
    • 53949114216 scopus 로고    scopus 로고
    • Soil microbial community structure in diverse land use systems: a comparative study using biolog, DGGE, and PLFA analyses
    • Xue D, Yao HY, Ge DY, Huang CY (2008) Soil microbial community structure in diverse land use systems: a comparative study using biolog, DGGE, and PLFA analyses. Pedosphere 18: 653-663.
    • (2008) Pedosphere , vol.18 , pp. 653-663
    • Xue, D.1    Yao, H.Y.2    Ge, D.Y.3    Huang, C.Y.4
  • 42
    • 77958559040 scopus 로고    scopus 로고
    • Activity and composition of ammonia-oxidizing bacteria in an aquic brown soil as influenced by land use and fertilization
    • Yu WT, Xu YG, Bi ML, Ma Q, Zhou H (2010) Activity and composition of ammonia-oxidizing bacteria in an aquic brown soil as influenced by land use and fertilization. Pedosphere 20: 789-798.
    • (2010) Pedosphere , vol.20 , pp. 789-798
    • Yu, W.T.1    Xu, Y.G.2    Bi, M.L.3    Ma, Q.4    Zhou, H.5
  • 43
    • 34047171252 scopus 로고    scopus 로고
    • Soil nutrients in intensive agricultural areas with different land-use types in Qingzhou county, China
    • Zhao GX, Li XJ, Wang RY, Li T, Yue YD (2007) Soil nutrients in intensive agricultural areas with different land-use types in Qingzhou county, China. Pedosphere 17: 165-171.
    • (2007) Pedosphere , vol.17 , pp. 165-171
    • Zhao, G.X.1    Li, X.J.2    Wang, R.Y.3    Li, T.4    Yue, Y.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.