Analyses of the radiation of birnaviruses from diverse host phyla and of their evolutionary affinities with other double-stranded RNA and positive strand RNA viruses using robust structure-based multiple sequence alignments and advanced phylogenetic methods

BMC Evolutionary Biology

Volumn 13, Issue 1, 2013, Pages

  Gibrat, Jean François ^a   Mariadassou, Mahendra ^a   Boudinot, Pierre ^b   Delmas, Bernard ^b  

^a INRA Institut National de la Recherche Agronomique   (France)

^b INRA Institut National de la Recherche Agronomique   (France)

Author keywords

Bayesian phylogeny method; Capsid protein; Double stranded RNA viruses; Maximum likelihood phylogeny method; Positive strand RNA viruses; RNA dependent RNA polymerase; Rotifer; Structure based alignments

Indexed keywords

BAYESIAN ANALYSIS; HOST RANGE; INSECT; INVERTEBRATE; MAXIMUM LIKELIHOOD ANALYSIS; PHYLOGENETICS; PHYLOGENY; PROTEIN; RECONSTRUCTION; VIRUS;

ANIMALIA; BIRNAVIRIDAE; CALICIVIRIDAE; CYSTOVIRIDAE; DSRNA VIRUSES; FLAVIVIRIDAE; FLAVIVIRUS; HEXAPODA; MIRIDAE; MOLLUSCA; NODAVIRIDAE; PICORNAVIRIDAE; RNA VIRUSES; ROTIFERA; VERTEBRATA;

DOUBLE STRANDED RNA; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; CLASSIFICATION; GENETICS; HOST RANGE; MOLECULAR EVOLUTION; PHYLOGENY; PHYSIOLOGY; RADIATION EXPOSURE; RNA VIRUS; ROTIFERA; SEQUENCE ALIGNMENT; VIROLOGY; VIRUS GENOME;

AMINO ACID SEQUENCE; ANIMALS; EVOLUTION, MOLECULAR; GENOME, VIRAL; HOST SPECIFICITY; PHYLOGENY; RNA VIRUSES; RNA, DOUBLE-STRANDED; ROTIFERA; SEQUENCE ALIGNMENT; VIRAL PROTEINS;

EID: 84880181660     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-13-154     Document Type: Article

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