Pigment pattern formation in the guppy, poecilia reticulata, involves the kita and csf1ra receptor tyrosine kinases

Genetics

Volumn 194, Issue 3, 2013, Pages 631-646

  Kottler, Verena A ^a   Fadeev, Andrey ^a   Weige, Detlef ^a   Dreyer, Christine ^a  

^a MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

COLONY STIMULATING FACTOR 1; PIGMENT; TYROSINE KINASE RECEPTOR;

ARTICLE; BIRTH; EMBRYO DEVELOPMENT; GENE CONTROL; GUPPY; MALE; MELANOPHORE; MUTANT; NONHUMAN; PRIORITY JOURNAL; SEX DIFFERENCE;

COLOR PATTERN; CSF1RA; GUPPY; KITA; PIGMENT PATTERN DEVELOPMENT;

ANIMALS; EMBRYONIC DEVELOPMENT; FEMALE; FISH PROTEINS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; MALE; MELANOPHORES; MOLECULAR SEQUENCE DATA; MORPHOGENESIS; PHYLOGENY; PIGMENTATION; POECILIA; RECEPTOR PROTEIN-TYROSINE KINASES; RECEPTOR, MACROPHAGE COLONY-STIMULATING FACTOR; SELECTION, GENETIC;

POECILIA RETICULATA;

EID: 84879762274     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.113.151738     Document Type: Article

References (60)

1. Adameyko, I., F. Lallemend, J. B. Aquino, J. A. Pereira, P. Topilko et al., 2009 Schwann cell precursors from nerve innervation are a cellular origin of melanocytes in skin. Cell 139: 366-379.
2. Alexander, H. J., and F. Breden, 2004 Sexual isolation and ex-treme morphological divergence in the Cumana guppy: a possi-ble case of incipient speciation. J. Evol. Biol. 17: 1238-1254.
3. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman, 1990 Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
4. Braasch, I., W. Salzburger, and A. Meyer, 2006 Asymmetric evo-lution in two fish-specifically duplicated receptor tyrosine kinase paralogons involved in teleost coloration. Mol. Biol. Evol. 23: 1192-1202.
5. Budi, E. H., L. B. Patterson, and D. M. Parichy, 2011 Post-embryonic nerve-associated precursors to adult pigment cells: genetic re-quirements and dynamics of morphogenesis and differentiation. PLoS Genet. 7: e1002044.
6. Clemens, H. P., C. McDermitt, and T. Inslee, 1966 The effects of feeding methyl testosterone to guppies for sixty days after birth. Copeia 1966: 280-284.
7. Dzwillo, M., 1959 Genetic investigations of domesticated strains of Lebistes reticulatus Peters Mitt. Hamburg. Zool. Mus. Inst. 57: 143-186 (in German).
8. Endler, J. A., 1983 Natural and sexual selection on color patterns in poeciliid fishes. Environ. Biol. Fishes 9: 173-190.
9. Felsenstein, J., 1989 PHYLIP-phylogeny inference package (ver-sion 3.2). Cladistics 5: 164-166.
10. Goodrich, H. B., N. D. Josephson, J. P. Trinkaus, and J. M. Slate, 1944 The cellular expression and genetics of two new genes in Lebistes reticulatus. Genetics 29: 584-592.
11. Goujon, M., H. McWilliam, W. Li, F. Valentin, S. Squizzato et al., 2010 A new bioinformatics analysis tools framework at EMBL-EBI. Nucleic Acids Res. 38: W695-W699.
12. Greenwood, A. K., J. N. Cech, and C. L. Peichel, 2012 Molecular and developmental contributions to divergent pigment patterns in marine and freshwater sticklebacks. Evol. Dev. 14: 351-362.
13. Guindon, S., J. F. Dufayard, V. Lefort, M. Anisimova, W. Hordijk et al., 2010 New algorithmsandmethods toestimatemaximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst. Biol. 59: 307-321.
14. Haskins, C. P., and J. P. Druzba, 1938 Note on anomalous inher-itance of sex-linked color factors in the Guppy. Am. Nat. 72: 571-574.
15. Houde, A. E., 1997 Sex, Color, and Mate Choice in Guppies. Prince-ton University Press, Princeton, NJ.
16. Hultman, K. A., N. Bahary, L. I. Zon, and S. L. Johnson, 2007 Gene duplication of the zebrafish kit ligand and partitioning of mela-nocyte development functions to kit ligand a. PLoS Genet. 3: e17.
17. Huson, D. H., and D. Bryant, 2006 Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23: 254-267.
18. Inaba, M., H. Yamanaka, and S. Kondo, 2012 Pigment pattern formation by contact-dependent depolarization. Science 335: 677.
19. Johnson, S. L., D. Africa, C. Walker, and J. A. Weston, 1995 Genetic control of adult pigment stripe development in zebrafish. Dev. Biol. 167: 27-33.
20. Kasahara, M., K. Naruse, S. Sasaki, Y. Nakatani, W. Qu et al., 2007 The medaka draft genome and insights into vertebrate genome evolution. Nature 447: 714-719.
21. Kelsh, R. N., M. L. Harris, S. Colanesi, and C. A. Erickson, 2009 Stripes and belly-spots: a review of pigment cell morpho-genesis in vertebrates. Semin. Cell Dev. Biol. 20: 90-104.
22. Kodric-Brown, A., 1985 Female preference and sexual selection for male coloration in the guppy (Poecilia reticulata). Behav. Ecol. Sociobiol. 17: 199-205.
23. Lamason, R. L., M. A. Mohideen, J. R. Mest, A. C. Wong, H. L. Norton et al., 2005 SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans. Science 310: 1782-1786.
24. Lindholm, A., and F. Breden, 2002 Sex chromosomes and sexual selection in Poeciliid fishes. Am. Nat. 160: S214-S224.
25. Lynn Lamoreux, M., R. N. Kelsh, Y. Wakamatsu, and K. Ozato, 2005 Pigment pattern formation in the medaka embryo. Pig-ment Cell Res. 18: 64-73.
26. Maderspacher, F., and C. Nusslein-Volhard, 2003 Formation of the adult pigment pattern in zebrafish requires leopard and obelix dependent cell interactions. Development 130: 3447-3457.
27. Magurran, A. E., 2005 Evolutionary Ecology: The Trinidadian Guppy. Oxford University Press, Oxford.
28. Martyn, U., D. Weigel, and C. Dreyer, 2006 In vitro culture of embryos of the guppy, Poecilia reticulata. Dev. Dyn. 235: 617-622.
29. Mellgren, E. M., and S. L. Johnson, 2005 kitb, a second zebrafish ortholog of mouse Kit. Dev. Genes Evol. 215: 470-477.
30. Miller, C. T., S. Beleza, A. A. Pollen, D. Schluter, R. A. Kittles et al., 2007 cis-regulatory changes in Kit ligand expression and par-allel evolution of pigmentation in sticklebacks and humans. Cell 131: 1179-1189.
31. Mills, M. G., R. J. Nuckels, and D. M. Parichy, 2007 Deconstructing evolution of adult phenotypes: genetic analyses of kit reveal ho-mology and evolutionary novelty during adult pigment pattern development of Danio fishes. Development 134: 1081-1090.
32. Mol, C. D., K. B. Lim, V. Sridhar, H. Zou, E. Y. Chien et al., 2003 Structure of a c-kit product complex reveals the basis for kinase transactivation. J. Biol. Chem. 278: 31461-31464.
33. Nakamasu, A., G. Takahashi, A. Kanbe, and S. Kondo, 2009 Interactions between zebrafish pigment cells responsible for the generation of Turing patterns. Proc. Natl. Acad. Sci. USA 106: 8429-8434.
34. Nusslein-Volhard, C., and R. Dahm, 2002 Zebrafish: A Practical Approach. Oxford University Press, Oxford.
35. Parichy, D. M., 2006 Evolution of danio pigment pattern develop-ment. Heredity (Edinb) 97: 200-210.
36. Parichy, D. M., and J. M. Turner, 2003a Zebrafish puma mutant decouples pigment pattern and somatic metamorphosis. Dev. Biol. 256: 242-257.
37. Parichy, D. M., and J. M. Turner, 2003b Temporal and cellular requirements for Fms signaling during zebrafish adult pigment pattern development. Development 130: 817-833.
38. Parichy, D. M., J. F. Rawls, S. J. Pratt, T. T. Whitfield, and S. L. Johnson, 1999 Zebrafish sparse corresponds to an orthologue of c-kit and is required for the morphogenesis of a subpopulation of melanocytes, but is not essential for hematopoiesis or primor-dial germ cell development. Development 126: 3425-3436.
39. Parichy, D. M., D. G. Ransom, B. Paw, L. I. Zon, and S. L. Johnson, 2000a An orthologue of the kit-related gene fms is required for development of neural crest-derived xanthophores and a sub-population of adult melanocytes in the zebrafish, Danio rerio. Development 127: 3031-3044.
40. Parichy, D. M., E. M. Mellgren, J. F. Rawls, S. S. Lopes, R. N. Kelsh et al., 2000b Mutational analysis of endothelin receptor b1 (rose) during neural crest and pigment pattern development in the zebrafish Danio rerio. Dev. Biol. 227: 294-306.
41. Parichy, D. M., M. R. Elizondo, M. G. Mills, T. N. Gordon, and R. E. Engeszer, 2009 Normal table of postembryonic zebrafish development: staging by externally visible anatomy of the living fish. Dev. Dyn. 238: 2975-3015.
42. Pfaffl, M. W., 2001 A new mathematical model for relative quan-tification in real-time RT-PCR. Nucleic Acids Res. 29: e45.
43. Quigley, I. K., J. L. Manuel, R. A. Roberts, R. J. Nuckels, E. R. Herrington et al., 2005 Evolutionary diversification of pigment pattern in Danio fishes: differential fms dependence and stripe loss in D. albolineatus. Development 132: 89-104.
44. Reznick, D., and J. A. Endler, 1982 The impact of predation on life history evolution in Trinidadian guppies (Poecilia reticulata). Evolution 36: 160-177.
45. Salzburger, W., I. Braasch, and A. Meyer, 2007 Adaptive sequence evolution in a color gene involved in the formation of the char-acteristic egg-dummies of male haplochromine cichlid fishes. BMC Biol. 5: 51.
46. Sievers, F., A. Wilm, D. Dineen, T. J. Gibson, K. Karplus et al., 2011 Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol. Syst. Biol. 7: 539. Takeuchi, I. K., 1976
47. Electron microscopy of two types of reflect-ing chromatophores (iridophores and leucophores) in the guppy, Lebistes reticulatus Peters. Cell Tissue Res. 173: 17-27.
48. Traut, W., and H. Winking, 2001 Meiotic chromosomes and stages of sex chromosome evolution in fish: zebrafish, platyfish and guppy. Chromosome Res. 9: 659-672.
49. Tripathi, N., M. Hoffmann, and C. Dreyer, 2008 Natural variation of male ornamental traits of the guppy, Poecilia reticulata. Zebra-fish 5: 265-278.
50. Tripathi, N., M. Hoffmann, D. Weigel, and C. Dreyer, 2009a Linkage analysis reveals the independent origin of Po-eciliid sex chromosomes and a case of atypical sex inheritance in the guppy (Poecilia reticulata). Genetics 182: 365-374.
51. Tripathi, N., M. Hoffmann, E. M. Willing, C. Lanz, D. Weigel et al., 2009b Genetic linkage map of the guppy, Poecilia reticulata, and quantitative trait loci analysis of male size and colour var-iation. Proc. Biol. Sci. 276: 2195-2208.
52. Vandesompele, J., K. De Preter, F. Pattyn, B. Poppe, N. Van Roy et al., 2002 Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3: RESEARCH0034.
53. Watanabe, K., Y. Washio, Y. Fujinami, M. Aritaki, S. Uji et al., 2008 Adult-type pigment cells, which color the ocular sides of flounders at metamorphosis, localize as precursor cells at the proximal parts of the dorsal and anal fins in early larvae. Dev. Growth Differ. 50: 731-741.
54. Willing, E. M., P. Bentzen, C. van Oosterhout, M. Hoffmann, J. Cable et al., 2010 Genome-wide single nucleotide polymor-phisms reveal population history and adaptive divergence in wild guppies. Mol. Ecol. 19: 968-984.
55. Winge, Ö., 1922 One-sided masculine and sex-linked inheritance in Lebistes reticulatus. J. Genet. 12: 145-162.
56. Winge, Ö., 1927 The location of eighteen genes in Lebistes retic-ulatus. J. Genet. 18: 1-43.
57. Winge, Ö., and E. Ditlevsen, 1947 Colour inheritance and sex determination in Lebistes. Heredity 1: 65-83.
58. Yamada, T., M. Okauchi, and K. Araki, 2010 Origin of adult-type pigment cells forming the asymmetric pigment pattern, in Jap-anese flounder (Paralichthys olivaceus). Dev. Dyn. 239: 3147-3162.
59. Yarden, Y., and A. Ullrich, 1988 Growth factor receptor tyrosine kinases. Annu. Rev. Biochem. 57: 443-478.
60. TRIPATHI, N., M. HOFFMANN and C. DREYER, 2008 Natural variation of male ornamental traits of the guppy, Poecilia reticulata. Zebrafish 5: 265-278.