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Volumn 19, Issue 7, 2013, Pages 948-957

hnRNP A1 and secondary structure coordinate alternative splicing of Mag

Author keywords

Alternative splicing; hnRNP A1; Mag; Myelin; Myelin associated glycoprotein; Secondary structure

Indexed keywords

MESSENGER RNA; MYELIN ASSOCIATED GLYCOPROTEIN; RIBONUCLEOPROTEIN; RIBONUCLEOPROTEIN A1; UNCLASSIFIED DRUG;

EID: 84879307306     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.036780.112     Document Type: Article
Times cited : (15)

References (45)
  • 1
    • 33846994060 scopus 로고    scopus 로고
    • Exon silencing by UAGG motifs in response to neuronal excitation
    • An P, Grabowski PJ. 2007. Exon silencing by UAGG motifs in response to neuronal excitation. PLoS Biol 5: e36.
    • (2007) PLoS Biol , vol.5
    • An, P.1    Grabowski, P.J.2
  • 3
    • 0030742643 scopus 로고    scopus 로고
    • Increased number of unmyelinated axons in optic nerves of adult mice deficient in the myelin-associated glycoprotein (MAG)
    • DOI 10.1016/S0006-8993(97)00484-8, PII S0006899397004848
    • Bartsch S, Montag D, Schachner M, Bartsch U. 1997. Increased number of unmyelinated axons in optic nerves of adult mice deficient in the myelin-associated glycoprotein (MAG). Brain Res 762: 231-234. (Pubitemid 27315956)
    • (1997) Brain Research , vol.762 , Issue.1-2 , pp. 231-234
    • Bartsch, S.1    Montag, D.2    Schachner, M.3    Bartsch, U.4
  • 4
    • 0030961869 scopus 로고    scopus 로고
    • A highly stable duplex structure sequesters the 5′ splice site region of hnRNP A1 alternative exon 7B
    • Blanchette M, Chabot B. 1997. A highly stable duplex structure sequesters the 5′ splice site region of hnRNP A1 alternative exon 7B. RNA 3: 405-419.
    • (1997) RNA , vol.3 , pp. 405-419
    • Blanchette, M.1    Chabot, B.2
  • 5
    • 0033119060 scopus 로고    scopus 로고
    • Modulation of exon skipping by high-affinity hnRNP A1-binding sites and by intron elements that repress splice site utilization
    • Blanchette M, Chabot B. 1999. Modulation of exon skipping by high-affinity hnRNP A1-binding sites and by intron elements that repress splice site utilization. EMBO J 18: 1939-1952. (Pubitemid 29158537)
    • (1999) EMBO Journal , vol.18 , Issue.7 , pp. 1939-1952
    • Blanchette, M.1    Chabot, B.2
  • 7
    • 0028215301 scopus 로고
    • RNA binding specificity of hnRNP A1: Significance of hnRNP A1 high-affinity binding sites in pre-mRNA splicing
    • Burd CG, Dreyfuss G. 1994. RNA binding specificity of hnRNP A1: Significance of hnRNP A1 high-affinity binding sites in premRNA splicing. EMBO J 13: 1197-1204. (Pubitemid 24074726)
    • (1994) EMBO Journal , vol.13 , Issue.5 , pp. 1197-1204
    • Burd, C.G.1    Dreyfuss, G.2
  • 8
    • 0036849108 scopus 로고    scopus 로고
    • HnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure
    • DOI 10.1017/S1355838202023075
    • Damgaard CK, Tange TO, Kjems J. 2002. hnRNP A1 controls HIV-1 mRNA splicing through cooperative binding to intron and exon splicing silencers in the context of a conserved secondary structure. RNA 8: 1401-1415. (Pubitemid 35332964)
    • (2002) RNA , vol.8 , Issue.11 , pp. 1401-1415
    • Damgaard, C.K.1    Tange, T.O.2    Kjems, J.3
  • 9
    • 0032962535 scopus 로고    scopus 로고
    • hnRNP A1 recruited to an exon in vivo can function as an exon splicing silencer
    • Del Gatto-Konczak F, Olive M, Gesnel MC, Breathnach R. 1999. hnRNP A1 recruited to an exon in vivo can function as an exon splicing silencer. Mol Cell Biol 19: 251-260.
    • (1999) Mol Cell Biol , vol.19 , pp. 251-260
    • Del Gatto-Konczak, F.1    Olive, M.2    Gesnel, M.C.3    Breathnach, R.4
  • 11
    • 79953789490 scopus 로고    scopus 로고
    • Myelin suppresses axon regeneration by PIR-B/SHP-mediated inhibition of Trk activity
    • Fujita Y, Endo S, Takai T, Yamashita T. 2011. Myelin suppresses axon regeneration by PIR-B/SHP-mediated inhibition of Trk activity. EMBO J 30: 1389-1401.
    • (2011) EMBO J , vol.30 , pp. 1389-1401
    • Fujita, Y.1    Endo, S.2    Takai, T.3    Yamashita, T.4
  • 13
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • Galaxy Team
    • Goecks J, Nekrutenko A, Taylor J, Galaxy Team. 2010. Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 11: R86.
    • (2010) Genome Biol , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 14
    • 26244435561 scopus 로고    scopus 로고
    • Mutually exclusive splicing of the insect Dscam premRNA directed by competing intronic RNA secondary structures
    • Graveley BR. 2005. Mutually exclusive splicing of the insect Dscam premRNA directed by competing intronic RNA secondary structures. Cell 123: 65 -73.
    • (2005) Cell , vol.123 , pp. 65-73
    • Graveley, B.R.1
  • 15
    • 34447115822 scopus 로고    scopus 로고
    • The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a
    • DOI 10.1038/nsmb1250, PII NSMB1250
    • Guil S, Cáceres JF. 2007. The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a. Nat Struct Mol Biol 14: 591-596. (Pubitemid 47037061)
    • (2007) Nature Structural and Molecular Biology , vol.14 , Issue.7 , pp. 591-596
    • Guil, S.1    Caceres, J.F.2
  • 16
    • 67449156149 scopus 로고    scopus 로고
    • RNA secondary structure analysis using the Vienna RNA package
    • doi: 10.1002/0471250953.bif202s26
    • Hofacker IL. 2009. RNA secondary structure analysis using the Vienna RNA package. Curr Protoc Bioinformatics doi: 10.1002/0471250953.bif202s26.
    • (2009) Curr Protoc Bioinformatics
    • Hofacker, I.L.1
  • 18
    • 0023275874 scopus 로고
    • Two forms of 1B236/myelin-associated glycoprotein, a cell adhesion molecule for postnatal neural development, are produced by alternative splicing
    • DOI 10.1073/pnas.84.12.4337
    • Lai C, Brow MA, Nave KA, Noronha AB, Quarles RH, Bloom FE, Milner RJ, Sutcliffe JG. 1987. Two forms of 1B236/myelin-associated glycoprotein, a cell adhesion molecule for postnatal neural development, are produced by alternative splicing. Proc Natl Acad Sci 84: 4337-4341. (Pubitemid 17090929)
    • (1987) Proceedings of the National Academy of Sciences of the United States of America , vol.84 , Issue.12 , pp. 4337-4341
    • Lai, C.1    Brow, M.A.2    Nave, K.-A.3
  • 19
    • 0031081587 scopus 로고    scopus 로고
    • Dying-back oligodendrogliopathy: A late sequel of myelin-associated glycoprotein deficiency
    • DOI 10.1002/(SICI)1098-1136(199702)19:2<104::AID-G
    • Lassmann H, Bartsch U, Montag D, Schachner M. 1997. Dying-back oligodendrogliopathy: A late sequel of myelin-associated glycoprotein deficiency. Glia 19: 104-110. (Pubitemid 27094128)
    • (1997) GLIA , vol.19 , Issue.2 , pp. 104-110
    • Lassmann, H.1    Bartsch, U.2    Montag, D.3    Schachner, M.4
  • 22
    • 0037119581 scopus 로고    scopus 로고
    • Myelin-associated glycoprotein as a functional ligand for the Nogo-66 receptor
    • DOI 10.1126/science.1073031
    • Liu B, Fournier A, GrandPré T. 2002. Myelin-associated glycoprotein as a functional ligand for the Nogo-66 receptor. Science 297: 1190-1193. (Pubitemid 36193355)
    • (2002) Science , vol.297 , Issue.5584 , pp. 1190-1193
    • Liu, B.P.1    Fournier, A.2    GrandPre, T.3    Strittmatter, S.M.4
  • 24
    • 0026534003 scopus 로고
    • CG-4, a new bipotential glial cell line from rat brain, is capable of differentiating in vitro into either mature oligodendrocytes or type-2 astrocytes
    • Louis JC, Magal E, Muir D, Manthorpe M, Varon S. 1992. CG-4, a new bipotential glial cell line from rat brain, is capable of differentiating in vitro into either mature oligodendrocytes or type-2 astrocytes. J Neurosci Res 31: 193-204.
    • (1992) J Neurosci Res , vol.31 , pp. 193-204
    • Louis, J.C.1    Magal, E.2    Muir, D.3    Manthorpe, M.4    Varon, S.5
  • 25
    • 0026543785 scopus 로고
    • Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2
    • Mayeda A, Krainer AR. 1992. Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2. Cell 68: 365-375.
    • (1992) Cell , vol.68 , pp. 365-375
    • Mayeda, A.1    Krainer, A.R.2
  • 26
    • 0028075680 scopus 로고
    • Identification of myelin-associated glycoprotein as a major myelin-derived inhibitor of neurite growth
    • McKerracher L, David S, Jackson DL, Kottis V, Dunn RJ, Braun PE. 1994 Identification of myelin-associated glycoprotein as a major myelin-derived inhibitor of neurite growth. Neuron 13: 805-811.
    • (1994) Neuron , vol.13 , pp. 805-811
    • McKerracher, L.1    David, S.2    Jackson, D.L.3    Kottis, V.4    Dunn, R.J.5    Braun, P.E.6
  • 27
    • 55049119136 scopus 로고    scopus 로고
    • Posttranscriptional regulation of miRNAs harboring conserved terminal loops
    • Michlewski G, Guil S, Semple CA, Cáceres JF. 2008. Posttranscriptional regulation of miRNAs harboring conserved terminal loops. Mol Cell 32: 383-393.
    • (2008) Mol Cell , vol.32 , pp. 383-393
    • Michlewski, G.1    Guil, S.2    Semple, C.A.3    Cáceres, J.F.4
  • 29
    • 0028060651 scopus 로고
    • A novel role for myelin-associated glycoprotein as an inhibitor of axonal regeneration
    • DOI 10.1016/0896-6273(94)90042-6
    • Mukhopadhyay G, Doherty P, Walsh FS, Crocker PR, Filbin MT. 1994. A novel role for myelin-associated glycoprotein as an inhibitor of axonal regeneration. Neuron 13: 757-767. (Pubitemid 24300179)
    • (1994) Neuron , vol.13 , Issue.3 , pp. 757-767
    • Mukhopadhyay, G.1    Doherty, P.2    Walsh, F.S.3    Crocker, P.R.4    Filbin, M.T.5
  • 30
    • 0032104190 scopus 로고    scopus 로고
    • A rule for termination-codon position within intron-containing genes: When nonsense affects RNA abundance
    • DOI 10.1016/S0968-0004(98)01208-0
    • Nagy E, Maquat LE. 1998. A rule for termination-codon position within intron-containing genes: When nonsense affects RNA abundance. Trends Biochem Sci 23: 198-199. (Pubitemid 28302613)
    • (1998) Trends in Biochemical Sciences , vol.23 , Issue.6 , pp. 198-199
    • Nagy, E.1    Maquat, L.E.2
  • 31
    • 70350433635 scopus 로고    scopus 로고
    • Cooperative-binding and splicing-repressive properties of hnRNP A1
    • Okunola HL, Krainer AR. 2009. Cooperative-binding and splicing-repressive properties of hnRNP A1. Mol Cell Biol 29: 5620-5631.
    • (2009) Mol Cell Biol , vol.29 , pp. 5620-5631
    • Okunola, H.L.1    Krainer, A.R.2
  • 32
    • 78650440712 scopus 로고    scopus 로고
    • Quantitative approaches to monitor protein-nucleic acid interactions using fluorescent probes
    • Pagano JM, Clingman CC, Ryder SP. 2011. Quantitative approaches to monitor protein-nucleic acid interactions using fluorescent probes. RNA 17: 14-20.
    • (2011) RNA , vol.17 , pp. 14-20
    • Pagano, J.M.1    Clingman, C.C.2    Ryder, S.P.3
  • 33
    • 8344253719 scopus 로고    scopus 로고
    • Folding thermodynamics and kinetics of YNMG RNA hairpins: Specific incorporation of 8-bromoguanosine leads to stabilization by enhancement of the folding rate
    • Proctor DJ, Ma H, Kierzek E, Kierzek R, Gruebele M, Bevilacqua PC. 2004.Folding thermodynamics and kinetics of YNMG RNA hairpins: Specific incorporation of 8-bromoguanosine leads to stabilization by enhancement of the folding rate. Biochemistry 43: 14004-14014.
    • (2004) Biochemistry , vol.43 , pp. 14004-14014
    • Proctor, D.J.1    Ma, H.2    Kierzek, E.3    Kierzek, R.4    Gruebele, M.5    Bevilacqua, P.C.6
  • 36
    • 0035812929 scopus 로고    scopus 로고
    • L-isoform but not S-isoform of myelin associated glycoprotein promotes neurite outgrowth of mouse cerebellar neurons
    • DOI 10.1016/S0304-3940(01)02113-9, PII S0304394001021139
    • Shimizu-Okabe C, Matsuda Y, Koito H, Yoshida S. 2001. L-isoform but not S-isoform of myelin associated glycoprotein promotes neurite outgrowth of mouse cerebellar neurons. Neurosci Lett 311: 203-205. (Pubitemid 32905472)
    • (2001) Neuroscience Letters , vol.311 , Issue.3 , pp. 203-205
    • Shimizu-Okabe, C.1    Matsuda, Y.2    Koito, H.3    Yoshida, S.4
  • 37
    • 0023697263 scopus 로고
    • Differential splicing of MAG transcripts during CNS and PNS development
    • Tropak MB, Johnson PW, Dunn RJ, Roder JC. 1988. Differential splicing of MAG transcripts during CNS and PNS development. Brain Res 464: 143-155.
    • (1988) Brain Res , vol.464 , pp. 143-155
    • Tropak, M.B.1    Johnson, P.W.2    Dunn, R.J.3    Roder, J.C.4
  • 39
    • 67249165478 scopus 로고    scopus 로고
    • The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing
    • Warf MB, Diegel JV, Hippel von PH, Berglund JA. 2009. The protein factors MBNL1 and U2AF65 bind alternative RNA structures to regulate splicing. Proc Natl Acad Sci 106: 9203-9208.
    • (2009) Proc Natl Acad Sci , vol.106 , pp. 9203-9208
    • Warf, M.B.1    Diegel, J.V.2    Von Hippel, P.H.3    Berglund, J.A.4
  • 43
    • 79851483839 scopus 로고    scopus 로고
    • Quaking regulates Hnrnpa1 expression through its 3? UTR in oligodendrocyte precursor cells
    • Zearfoss NR, Clingman CC, Farley BM, McCoig LM, Ryder SP. 2011. Quaking regulates Hnrnpa1 expression through its 3? UTR in oligodendrocyte precursor cells. PLoS Genet 7: e1001269.
    • (2011) PLoS Genet , vol.7
    • Zearfoss, N.R.1    Clingman, C.C.2    Farley, B.M.3    McCoig, L.M.4    Ryder, S.P.5
  • 44
    • 78650495026 scopus 로고    scopus 로고
    • Quaking I controls a unique cytoplasmic pathway that regulates alternative splicing of myelin-associated glycoprotein
    • Zhao L, Mandler MD, Yi H, Feng Y. 2010. Quaking I controls a unique cytoplasmic pathway that regulates alternative splicing of myelin-associated glycoprotein. Proc Natl Acad Sci 107: 19061-19066.
    • (2010) Proc Natl Acad Sci , vol.107 , pp. 19061-19066
    • Zhao, L.1    Mandler, M.D.2    Yi, H.3    Feng, Y.4
  • 45
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • DOI 10.1093/nar/gkg595
    • Zuker M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415. (Pubitemid 37442169)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.