메뉴 건너뛰기




Volumn 8, Issue 6, 2013, Pages

Application of Holistic Liquid Chromatography-High Resolution Mass Spectrometry Based Urinary Metabolomics for Prostate Cancer Detection and Biomarker Discovery

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER; CREATININE; TUMOR MARKER;

EID: 84879169165     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0065880     Document Type: Article
Times cited : (57)

References (40)
  • 1
    • 84863011452 scopus 로고    scopus 로고
    • The metabolic profile of tumors depends on both the responsible genetic lesion and tissue type
    • Yuneva MO, Fan TW, Allen TD, Higashi RM, Ferraris DV, et al. (2012) The metabolic profile of tumors depends on both the responsible genetic lesion and tissue type. Cell Metab 15: 157-170.
    • (2012) Cell Metab , vol.15 , pp. 157-170
    • Yuneva, M.O.1    Fan, T.W.2    Allen, T.D.3    Higashi, R.M.4    Ferraris, D.V.5
  • 4
    • 60149091657 scopus 로고    scopus 로고
    • Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression
    • Sreekumar A, Poisson LM, Rajendiran TM, Khan AP, Cao Q, et al. (2009) Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature 457: 910-914.
    • (2009) Nature , vol.457 , pp. 910-914
    • Sreekumar, A.1    Poisson, L.M.2    Rajendiran, T.M.3    Khan, A.P.4    Cao, Q.5
  • 5
    • 79958118842 scopus 로고    scopus 로고
    • Sarcosine as a marker in prostate cancer progression: a rapid and simple method for its quantification in human urine by solid-phase microextraction-gas chromatography-triple quadrupole mass spectrometry
    • Cavaliere B, Macchione B, Monteleone M, Naccarato A, Sindona G, et al. (2011) Sarcosine as a marker in prostate cancer progression: a rapid and simple method for its quantification in human urine by solid-phase microextraction-gas chromatography-triple quadrupole mass spectrometry. Anal Bioanal Chem 400: 2903-2912.
    • (2011) Anal Bioanal Chem , vol.400 , pp. 2903-2912
    • Cavaliere, B.1    Macchione, B.2    Monteleone, M.3    Naccarato, A.4    Sindona, G.5
  • 6
    • 79960561808 scopus 로고    scopus 로고
    • GC/MS-based metabolomic approach to validate the role of urinary sarcosine and target biobiomarkers for human prostate cancer by microwave-assisted derivatization
    • Wu H, Liu T, Ma C, Xue R, Deng C, et al. (2011) GC/MS-based metabolomic approach to validate the role of urinary sarcosine and target biobiomarkers for human prostate cancer by microwave-assisted derivatization. Anal Bioanal Chem 401: 635-646.
    • (2011) Anal Bioanal Chem , vol.401 , pp. 635-646
    • Wu, H.1    Liu, T.2    Ma, C.3    Xue, R.4    Deng, C.5
  • 7
    • 66349091134 scopus 로고    scopus 로고
    • [Analysis of the metabolome suggests a major potential role of sarcosine in the progression of cancer of the prostate]
    • Darbon JM, (2009) [Analysis of the metabolome suggests a major potential role of sarcosine in the progression of cancer of the prostate]. Bull Cancer 96: 355-356.
    • (2009) Bull Cancer , vol.96 , pp. 355-356
    • Darbon, J.M.1
  • 8
    • 77955517340 scopus 로고    scopus 로고
    • Sarcosine in Urine after Digital Rectal Examination Fails as a Marker in Prostate Cancer Detection and Identification of Aggressive Tumours
    • Jentzmik F, Stephan C, Miller K, Schrader M, Erbersdobler A, et al. (2010) Sarcosine in Urine after Digital Rectal Examination Fails as a Marker in Prostate Cancer Detection and Identification of Aggressive Tumours. Eur Urol 58: 12-18.
    • (2010) Eur Urol , vol.58 , pp. 12-18
    • Jentzmik, F.1    Stephan, C.2    Miller, K.3    Schrader, M.4    Erbersdobler, A.5
  • 9
    • 78651318867 scopus 로고    scopus 로고
    • Sarcosine in prostate cancer tissue is not a differential metabolite for prostate cancer aggressiveness and biochemical progression
    • Jentzmik F, Stephan C, Lein M, Miller K, Kamlage B, et al. (2011) Sarcosine in prostate cancer tissue is not a differential metabolite for prostate cancer aggressiveness and biochemical progression. J Urol 185: 706-711.
    • (2011) J Urol , vol.185 , pp. 706-711
    • Jentzmik, F.1    Stephan, C.2    Lein, M.3    Miller, K.4    Kamlage, B.5
  • 11
    • 77952880618 scopus 로고    scopus 로고
    • Is urinary sarcosine useful to identify patients with significant prostate cancer? The trials and tribulations of biomarker development
    • Schalken JA, (2010) Is urinary sarcosine useful to identify patients with significant prostate cancer? The trials and tribulations of biomarker development. Eur Urol 58: 19-20.
    • (2010) Eur Urol , vol.58 , pp. 19-20
    • Schalken, J.A.1
  • 12
    • 84864398933 scopus 로고    scopus 로고
    • Plasma sarcosine does not distinguish early and advanced stages of prostate cancer
    • Bohm L, Serafin AM, Fernandez P, Van der Watt G, Bouic PJ, et al. (2012) Plasma sarcosine does not distinguish early and advanced stages of prostate cancer. S Afr Med J 102: 677-679.
    • (2012) S Afr Med J , vol.102 , pp. 677-679
    • Bohm, L.1    Serafin, A.M.2    Fernandez, P.3    Van der Watt, G.4    Bouic, P.J.5
  • 14
    • 84867069711 scopus 로고    scopus 로고
    • Serum sarcosine increases the accuracy of prostate cancer detection in patients with total serum PSA less than 4.0 ng/ml
    • Lucarelli G, Fanelli M, Larocca AM, Germinario CA, Rutigliano M, et al. (2012) Serum sarcosine increases the accuracy of prostate cancer detection in patients with total serum PSA less than 4.0 ng/ml. Prostate 72: 1611-1621.
    • (2012) Prostate , vol.72 , pp. 1611-1621
    • Lucarelli, G.1    Fanelli, M.2    Larocca, A.M.3    Germinario, C.A.4    Rutigliano, M.5
  • 16
    • 84893895009 scopus 로고    scopus 로고
    • Differential mobility analysis-mass spectrometry coupled to XCMS algorithm as a novel analytical platform for metabolic profiling
    • Martinez-Lozano P, Criado E, Vidal G, Cristoni S, Franzoso F, et al. (2011) Differential mobility analysis-mass spectrometry coupled to XCMS algorithm as a novel analytical platform for metabolic profiling. Metabolomics Online First™.
    • (2011) Metabolomics Online First™
    • Martinez-Lozano, P.1    Criado, E.2    Vidal, G.3    Cristoni, S.4    Franzoso, F.5
  • 17
    • 78649944454 scopus 로고    scopus 로고
    • Metabolomic characterization of human prostate cancer bone metastases reveals increased levels of cholesterol
    • Thysell E, Surowiec I, Hornberg E, Crnalic S, Widmark A, et al. (2010) Metabolomic characterization of human prostate cancer bone metastases reveals increased levels of cholesterol. PLoS One 5: e14175.
    • (2010) PLoS One , vol.5
    • Thysell, E.1    Surowiec, I.2    Hornberg, E.3    Crnalic, S.4    Widmark, A.5
  • 18
    • 80052930281 scopus 로고    scopus 로고
    • Application of metabolomics to prostate cancer
    • Trock BJ, (2011) Application of metabolomics to prostate cancer. Urol Oncol 29: 572-581.
    • (2011) Urol Oncol , vol.29 , pp. 572-581
    • Trock, B.J.1
  • 19
    • 63049134550 scopus 로고    scopus 로고
    • Urine metabolomics analysis for kidney cancer detection and biomarker discovery
    • Kim K, Aronov P, Zakharkin SO, Anderson D, Perroud B, et al. (2009) Urine metabolomics analysis for kidney cancer detection and biomarker discovery. Mol Cell Proteomics 8: 558-570.
    • (2009) Mol Cell Proteomics , vol.8 , pp. 558-570
    • Kim, K.1    Aronov, P.2    Zakharkin, S.O.3    Anderson, D.4    Perroud, B.5
  • 20
    • 80052945596 scopus 로고    scopus 로고
    • Urine metabolomics for kidney cancer detection and biomarker discovery
    • Ganti S, Weiss RH, (2011) Urine metabolomics for kidney cancer detection and biomarker discovery. Urol Oncol 29: 551-557.
    • (2011) Urol Oncol , vol.29 , pp. 551-557
    • Ganti, S.1    Weiss, R.H.2
  • 21
    • 43049154785 scopus 로고    scopus 로고
    • Detection of bladder cancer in human urine by metabolomic profiling using high performance liquid chromatography/mass spectrometry
    • Issaq HJ, Nativ O, Waybright T, Luke B, Veenstra TD, et al. (2008) Detection of bladder cancer in human urine by metabolomic profiling using high performance liquid chromatography/mass spectrometry. J Urol 179: 2422-2426.
    • (2008) J Urol , vol.179 , pp. 2422-2426
    • Issaq, H.J.1    Nativ, O.2    Waybright, T.3    Luke, B.4    Veenstra, T.D.5
  • 22
    • 85043445656 scopus 로고    scopus 로고
    • Holistic metabonomic profiling of urine affords potential early diagnosis for bladder and kidney cancers
    • Huang Z, Chen Y, Huang W, Gao Y, Lin L, et al. (2012) Holistic metabonomic profiling of urine affords potential early diagnosis for bladder and kidney cancers. Metabolomics Online First™.
    • (2012) Metabolomics Online First™
    • Huang, Z.1    Chen, Y.2    Huang, W.3    Gao, Y.4    Lin, L.5
  • 23
    • 57949103373 scopus 로고    scopus 로고
    • Mass spectrometry based metabolomic approaches in urinary biomarker study of women's cancers
    • Woo HM, Kim KM, Choi MH, Jung BH, Lee J, et al. (2009) Mass spectrometry based metabolomic approaches in urinary biomarker study of women's cancers. Clin Chim Acta 400: 63-69.
    • (2009) Clin Chim Acta , vol.400 , pp. 63-69
    • Woo, H.M.1    Kim, K.M.2    Choi, M.H.3    Jung, B.H.4    Lee, J.5
  • 24
    • 69249140995 scopus 로고    scopus 로고
    • Metabonomics study of liver cancer based on ultra performance liquid chromatography coupled to mass spectrometry with HILIC and RPLC separations
    • Chen J, Wang W, Lv S, Yin P, Zhao X, et al. (2009) Metabonomics study of liver cancer based on ultra performance liquid chromatography coupled to mass spectrometry with HILIC and RPLC separations. Anal Chim Acta 650: 3-9.
    • (2009) Anal Chim Acta , vol.650 , pp. 3-9
    • Chen, J.1    Wang, W.2    Lv, S.3    Yin, P.4    Zhao, X.5
  • 25
    • 84863422028 scopus 로고    scopus 로고
    • Evaluation of coupling reversed phase, aqueous normal phase, and hydrophilic interaction liquid chromatography with Orbitrap mass spectrometry for metabolomic studies of human urine
    • Zhang T, Creek DJ, Barrett MP, Blackburn G, Watson DG, (2012) Evaluation of coupling reversed phase, aqueous normal phase, and hydrophilic interaction liquid chromatography with Orbitrap mass spectrometry for metabolomic studies of human urine. Anal Chem 84: 1994-2001.
    • (2012) Anal Chem , vol.84 , pp. 1994-2001
    • Zhang, T.1    Creek, D.J.2    Barrett, M.P.3    Blackburn, G.4    Watson, D.G.5
  • 26
    • 78650175031 scopus 로고    scopus 로고
    • Recent and potential developments in the analysis of urine: a review
    • Ryan D, Robards K, Prenzler PD, Kendall M, (2011) Recent and potential developments in the analysis of urine: a review. Anal Chim Acta 684: 8-20.
    • (2011) Anal Chim Acta , vol.684 , pp. 8-20
    • Ryan, D.1    Robards, K.2    Prenzler, P.D.3    Kendall, M.4
  • 28
    • 79959913950 scopus 로고    scopus 로고
    • Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry
    • Dunn WB, Broadhurst D, Begley P, Zelena E, Francis-McIntyre S, et al. (2011) Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry. Nat Protoc 6: 1060-1083.
    • (2011) Nat Protoc , vol.6 , pp. 1060-1083
    • Dunn, W.B.1    Broadhurst, D.2    Begley, P.3    Zelena, E.4    Francis-McIntyre, S.5
  • 29
    • 80053427408 scopus 로고    scopus 로고
    • Global urinary metabolic profiling procedures using gas chromatography-mass spectrometry
    • Chan EC, Pasikanti KK, Nicholson JK, (2011) Global urinary metabolic profiling procedures using gas chromatography-mass spectrometry. Nat Protoc 6: 1483-1499.
    • (2011) Nat Protoc , vol.6 , pp. 1483-1499
    • Chan, E.C.1    Pasikanti, K.K.2    Nicholson, J.K.3
  • 30
  • 31
    • 0037230516 scopus 로고    scopus 로고
    • Towards complete and accurate reporting of studies of diagnostic accuracy: The STARD initiative
    • Bossuyt PM, Reitsma JB, Bruns DE, Gatsonis CA, Glasziou PP, et al. (2003) Towards complete and accurate reporting of studies of diagnostic accuracy: The STARD initiative. Clinical Chemistry 49: 1-6.
    • (2003) Clinical Chemistry , vol.49 , pp. 1-6
    • Bossuyt, P.M.1    Reitsma, J.B.2    Bruns, D.E.3    Gatsonis, C.A.4    Glasziou, P.P.5
  • 32
    • 77954772536 scopus 로고    scopus 로고
    • MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
    • Pluskal T, Castillo S, Villar-Briones A, Oresic M, (2010) MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data. BMC Bioinformatics 11: 395.
    • (2010) BMC Bioinformatics , vol.11 , pp. 395
    • Pluskal, T.1    Castillo, S.2    Villar-Briones, A.3    Oresic, M.4
  • 33
    • 79960495785 scopus 로고    scopus 로고
    • Mass Spectrometry-based Holistic Analytical Approaches for Metabolite Profiling In Systems Biology Studies
    • Theodorides G, Gika GH, Wilson DI, (2011) Mass Spectrometry-based Holistic Analytical Approaches for Metabolite Profiling In Systems Biology Studies. Mass Spectrometry Reviews 30: 884-906.
    • (2011) Mass Spectrometry Reviews , vol.30 , pp. 884-906
    • Theodorides, G.1    Gika, G.H.2    Wilson, D.I.3
  • 35
    • 59949096357 scopus 로고    scopus 로고
    • Five cases of beta-ureidopropionase deficiency detected by GC/MS analysis of urine metabolome
    • Kuhara T, Ohse M, Inoue Y, Shinka T, (2009) Five cases of beta-ureidopropionase deficiency detected by GC/MS analysis of urine metabolome. J Mass Spectrom 44: 214-221.
    • (2009) J Mass Spectrom , vol.44 , pp. 214-221
    • Kuhara, T.1    Ohse, M.2    Inoue, Y.3    Shinka, T.4
  • 36
    • 0026030040 scopus 로고
    • Processing of DNA base damage by DNA polymerases. Dihydrothymine and beta-ureidoisobutyric acid as models for instructive and noninstructive lesions
    • Ide H, Petrullo LA, Hatahet Z, Wallace SS, (1991) Processing of DNA base damage by DNA polymerases. Dihydrothymine and beta-ureidoisobutyric acid as models for instructive and noninstructive lesions. J Biol Chem 266: 1469-1477.
    • (1991) J Biol Chem , vol.266 , pp. 1469-1477
    • Ide, H.1    Petrullo, L.A.2    Hatahet, Z.3    Wallace, S.S.4
  • 37
    • 0036628726 scopus 로고    scopus 로고
    • Biological consequences of free radical-damaged DNA bases
    • Wallace SS, (2002) Biological consequences of free radical-damaged DNA bases. Free Radic Biol Med 33: 1-14.
    • (2002) Free Radic Biol Med , vol.33 , pp. 1-14
    • Wallace, S.S.1
  • 38
    • 0344586043 scopus 로고    scopus 로고
    • Mutagenicity, toxicity and repair of DNA base damage induced by oxidation
    • Bjelland S, Seeberg E, (2003) Mutagenicity, toxicity and repair of DNA base damage induced by oxidation. Mutat Res 531: 37-80.
    • (2003) Mutat Res , vol.531 , pp. 37-80
    • Bjelland, S.1    Seeberg, E.2
  • 39
    • 0033385142 scopus 로고    scopus 로고
    • Where does indolylacrylic acid come from?
    • Marklova E, (1999) Where does indolylacrylic acid come from? Amino Acids 17: 401-413.
    • (1999) Amino Acids , vol.17 , pp. 401-413
    • Marklova, E.1
  • 40
    • 29344432053 scopus 로고    scopus 로고
    • Aromatic l-aminoacid decarboxylase deficiency: unusual neonatal presentation and additional findings in organic acid analysis
    • Abdenur JE, Abeling N, Specola N, Jorge L, Schenone AB, et al. (2006) Aromatic l-aminoacid decarboxylase deficiency: unusual neonatal presentation and additional findings in organic acid analysis. Mol Genet Metab 87: 48-53.
    • (2006) Mol Genet Metab , vol.87 , pp. 48-53
    • Abdenur, J.E.1    Abeling, N.2    Specola, N.3    Jorge, L.4    Schenone, A.B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.