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Volumn 56, Issue 11, 2013, Pages 4758-4763

X-ray crystal structures of the Escherichia coli RNA polymerase in complex with benzoxazinorifamycins

Author keywords

[No Author keywords available]

Indexed keywords

BENZOXAZINORIFAMYCIN; HOLOENZYME; RIFABUTIN; RIFALAZIL; RIFAMPICIN; RIFAMYCIN; RIFAPENTINE; RNA POLYMERASE; UNCLASSIFIED DRUG;

EID: 84879063733     PISSN: 00222623     EISSN: 15204804     Source Type: Journal    
DOI: 10.1021/jm4004889     Document Type: Article
Times cited : (48)

References (25)
  • 2
    • 70349378677 scopus 로고    scopus 로고
    • Review of knowledge for rational design and identification of anti-tubercular compounds
    • Siddiqi, M. I.; Kumar, A. Review of knowledge for rational design and identification of anti-tubercular compounds Expert Opin. Drug Discovery 2009, 4, 1005-1015
    • (2009) Expert Opin. Drug Discovery , vol.4 , pp. 1005-1015
    • Siddiqi, M.I.1    Kumar, A.2
  • 3
    • 77951092627 scopus 로고    scopus 로고
    • New drugs and new regimens for the treatment of tuberculosis: Review of the drug development pipeline and implications for national programmes
    • Lienhardt, C.; Vernon, A.; Raviglione, M. C. New drugs and new regimens for the treatment of tuberculosis: review of the drug development pipeline and implications for national programmes Curr. Opin. Pulm. Med. 2010, 16, 186-193
    • (2010) Curr. Opin. Pulm. Med. , vol.16 , pp. 186-193
    • Lienhardt, C.1    Vernon, A.2    Raviglione, M.C.3
  • 8
    • 0028835430 scopus 로고    scopus 로고
    • In vitro activity of the benzoxazinorifamycin KRM-1648 against drug-susceptible and multidrug-resistant tubercle bacilli
    • Luna-Herrera, J.; Venkata Reddy, M.; Gangadharam, P. R. J. In vitro activity of the benzoxazinorifamycin KRM-1648 against drug-susceptible and multidrug-resistant tubercle bacilli Antimicrob. Agents Chemother. 1996, 39, 440-444
    • (1996) Antimicrob. Agents Chemother. , vol.39 , pp. 440-444
    • Luna-Herrera, J.1    Venkata Reddy, M.2    Gangadharam, P.R.J.3
  • 9
    • 0029861539 scopus 로고    scopus 로고
    • Comparative antimycobacterial activities of rifampin, rifapentine, and KRM-1648 against a collection of rifampin-resistant Mycobacterium tuberculosis isolates with known rpoB mutations
    • Moghazeh, S.; Pan, X.; Arain, T.; Stover, C. K.; Musser, J. M.; Kreiswirth, B. N. Comparative antimycobacterial activities of rifampin, rifapentine and KRM-1648 against a collection of rifampin-resistant Mycobacterium tuberculosis isolates with known rpoB mutations Antimicrob. Agents Chemother. 1996, 40, 2655-2657 (Pubitemid 26367663)
    • (1996) Antimicrobial Agents and Chemotherapy , vol.40 , Issue.11 , pp. 2655-2657
    • Moghazeh, S.L.1    Pan, X.2    Arain, T.3    Stover, C.K.4    Musser, J.M.5    Kreiswirth, B.N.6
  • 10
    • 0030035050 scopus 로고    scopus 로고
    • In vitro bactericidal and in vivo therapeutic activities of a new rifamycin derivative, KRM-1648, against Mycobacterium tuberculosis
    • Yamamoto, T.; Amitani, R.; Suzuki, K.; Tanaka, E.; Murayama, T.; Kuze, F. In vitro bactericidal and in vivo therapeutic activities of a new rifamycin derivative, KRM-1648, against Mycobacterium tuberculosis Antimicrob. Agents Chemother. 1996, 40, 426-428 (Pubitemid 26053140)
    • (1996) Antimicrobial Agents and Chemotherapy , vol.40 , Issue.2 , pp. 426-428
    • Yamamoto, T.1    Amitani, R.2    Suzuki, K.3    Tanaka, E.4    Murayama, T.5    Kuze, F.6
  • 11
    • 0031795962 scopus 로고    scopus 로고
    • Relationship between antimycobacterial activities of rifampicin, rifabutin and KRM-1648 and rpoB mutations of Mycobacterium tuberculosis
    • DOI 10.1093/jac/42.5.621
    • Yang, B.; Koga, H.; Ohno, H.; Ogawa, K.; Fukuda, M.; Hirakata, Y.; Maesaki, S.; Tomono, K.; Tashiro, T.; Kohno, S. Relationship between antimycobacterial activities of rifampicin, rifabutin and KRM-1648 and rpoB mutations of Mycobacterium tuberculosis J. Antimicrob. Chemother. 1998, 42, 621-628 (Pubitemid 28510620)
    • (1998) Journal of Antimicrobial Chemotherapy , vol.42 , Issue.5 , pp. 621-628
    • Yang, B.1    Koga, H.2    Ohno, H.3    Ogawa, K.4    Fukuda, M.5    Hirakata, Y.6    Maesaki, S.7    Tomono, K.8    Tashiro, T.9    Kohno, S.10
  • 12
    • 0031691174 scopus 로고    scopus 로고
    • Effect of a new rifamycin derivative, rifalazil, on liver microsomal enzyme induction in rat and dog
    • Mae, T.; Hosoe, K.; Yamamoto, T.; Hidaka, T.; Ohashi, T.; Kleeman, J. M.; Adams, P. E. Effect of a new rifamycin derivative, rifalazil, on liver microsomal enzyme induction in rat and dog Xenobiotica 1998, 28, 759-766 (Pubitemid 28399042)
    • (1998) Xenobiotica , vol.28 , Issue.8 , pp. 759-766
    • Mae, T.1    Hosoe, K.2    Yamamoto, T.3    Hidaka, T.4    Ohashi, T.5    Kleeman, J.M.6    Adams, P.E.7
  • 13
    • 84860277072 scopus 로고    scopus 로고
    • Structure-based design of novel benzoxazinorifamycins with potent binding affinity to wild-type and rifampin-resistant mutant Mycobacterium tuberculosis RNA polymerases
    • Gill, S. K.; Xu, H.; Kirchhoff, P. D.; Wan, B.; Zhang, N.; Peng, K.-W.; Franzblau, S. G.; Garcia, G. A.; Showalter, H. D. Structure-based design of novel benzoxazinorifamycins with potent binding affinity to wild-type and rifampin-resistant mutant Mycobacterium tuberculosis RNA polymerases J. Med. Chem. 2012, 55, 3814-3826
    • (2012) J. Med. Chem. , vol.55 , pp. 3814-3826
    • Gill, S.K.1    Xu, H.2    Kirchhoff, P.D.3    Wan, B.4    Zhang, N.5    Peng, K.-W.6    Franzblau, S.G.7    Garcia, G.A.8    Showalter, H.D.9
  • 14
    • 0035937403 scopus 로고    scopus 로고
    • Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
    • DOI 10.1016/S0092-8674(01)00286-0
    • Campbell, E. A.; Korzheva, N.; Mustaev, A.; Murakami, K.; Nair, S.; Goldfarb, A.; Darst, S. A. Structural mechanism for rifampicin inhibition of bacterial RNA polymerase Cell 2001, 104, 901-912 (Pubitemid 32289282)
    • (2001) Cell , vol.104 , Issue.6 , pp. 901-912
    • Campbell, E.A.1    Korzheva, N.2    Mustaev, A.3    Murakami, K.4    Nair, S.5    Goldfarb, A.6    Darst, S.A.7
  • 15
    • 23744489566 scopus 로고    scopus 로고
    • Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins
    • DOI 10.1016/j.cell.2005.07.014, PII S0092867405007087
    • Artsimovitch, I.; Vassylyeva, M. N.; Svetlov, D.; Svetlov, V.; Perederina, A.; Igarashi, N.; Matsugaki, N.; Wakatsuki, S.; Tahirov, T. H.; Vassylyev, D. G. Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins Cell 2005, 122, 351-363 (Pubitemid 41127138)
    • (2005) Cell , vol.122 , Issue.3 , pp. 351-363
    • Artsimovitch, I.1    Vassylyeva, M.N.2    Svetlov, D.3    Svetlov, V.4    Perederina, A.5    Igarashi, N.6    Matsugaki, N.7    Wakatsuki, S.8    Tahirov, T.H.9    Vassylyev, D.G.10
  • 16
    • 84875972911 scopus 로고    scopus 로고
    • The X-ray crystal structure of Escherichia coli RNA polymerase sigma70 holoenzyme
    • Murakami, K. S. The X-ray crystal structure of Escherichia coli RNA polymerase sigma70 holoenzyme J. Biol. Chem. 2013, 288, 9126-9134
    • (2013) J. Biol. Chem. , vol.288 , pp. 9126-9134
    • Murakami, K.S.1
  • 20
    • 33745832269 scopus 로고    scopus 로고
    • Region 3.2 of the σ subunit contributes to the binding of the 3′-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation
    • DOI 10.1074/jbc.C600060200
    • Kulbachinskiy, A.; Mustaev, A. Region 3.2 of the sigma subunit contributes to the binding of the 3′-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation J. Biol. Chem. 2006, 281, 18273-18276 (Pubitemid 44035483)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.27 , pp. 18273-18276
    • Kulbachinskiy, A.1    Mustaev, A.2
  • 21
    • 0018239472 scopus 로고
    • On the mechanism of rifampicin inhibition of RNA synthesis
    • McClure, W. R.; Cech, C. L. On the mechanism of rifampicin inhibition of RNA synthesis J. Biol. Chem. 1978, 253, 8949-8956 (Pubitemid 9117005)
    • (1978) Journal of Biological Chemistry , vol.253 , Issue.24 , pp. 8949-8956
    • McClure, W.R.1    Cech, C.L.2
  • 22
    • 80052772699 scopus 로고    scopus 로고
    • Rifamycin inhibition of WT and Rif-resistant Mycobacterium tuberculosis and Escherichia coli RNA polymerases in vitro
    • Gill, S. K.; Garcia, G. A. Rifamycin inhibition of WT and Rif-resistant Mycobacterium tuberculosis and Escherichia coli RNA polymerases in vitro Tuberculosis 2011, 91, 361-369
    • (2011) Tuberculosis , vol.91 , pp. 361-369
    • Gill, S.K.1    Garcia, G.A.2
  • 23
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • DOI 10.1016/S0076-6879(97)76066-X
    • Otwinowski, Z.; Minor, W. Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol. 1997, 276, 307-326 (Pubitemid 27085611)
    • (1997) Methods in Enzymology , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.