메뉴 건너뛰기




Volumn 63, Issue PART6, 2013, Pages 2260-2264

Sphingobacterium caeni sp. nov., isolated from activated sludge

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; MENAQUINONE; RNA 16S;

EID: 84878859328     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.046987-0     Document Type: Article
Times cited : (27)

References (38)
  • 1
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • & Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes
    • Bernardet, J.-F., Nakagawa, Y., Holmes, B. & Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52, 1049-1070.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.-F.1    Nakagawa, Y.2    Holmes, B.3
  • 2
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gram reactions of marine bacteria
    • Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 3
    • 84868331920 scopus 로고    scopus 로고
    • Sphingobacterium kyonggiense sp. nov., isolated from perchloroethylene (PCE) contaminated soil and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii
    • Choi, H.-A. & Lee, S.-S. (2012). Sphingobacterium kyonggiense sp. nov., isolated from perchloroethylene (PCE) contaminated soil and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii. Int J Syst Evol Microbiol 62, 2559-2564.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 2559-2564
    • Choi, H.-A.1    Lee, S.-S.2
  • 4
    • 0017682064 scopus 로고
    • Distribution of menaquinones in actinomycetes and corynebacteria
    • Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
    • (1977) J Gen Microbiol , vol.100 , pp. 221-230
    • Collins, M.D.1    Pirouz, T.2    Goodfellow, M.3    Minnikin, D.E.4
  • 6
    • 75949114537 scopus 로고    scopus 로고
    • Sphingobacterium bambusae sp. nov., isolated from soil of bamboo plantation
    • Duan, S., Liu, Z., Feng, X., Zheng, K. & Cheng, L. (2009). Sphingobacterium bambusae sp. nov., isolated from soil of bamboo plantation. J Microbiol 47, 693-698.
    • (2009) J Microbiol , vol.47 , pp. 693-698
    • Duan, S.1    Liu, Z.2    Feng, X.3    Zheng, K.4    Cheng, L.5
  • 7
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 8
    • 0003437299 scopus 로고
    • version 3.5c. Department of Genetics, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogeny inference package), version 3.5c. Department of Genetics, University of Washington, Seattle, USA.
    • (1993) PHYLIP (phylogeny Inference Package)
    • Felsenstein, J.1
  • 10
    • 33749010064 scopus 로고    scopus 로고
    • Sphingobacterium daejeonense sp. nov., isolated from a compost sample
    • Kim, K.-H., Ten, L. N., Liu, Q.-M., Im, W.-T. & Lee, S.-T. (2006). Sphingobacterium daejeonense sp. nov., isolated from a compost sample. Int J Syst Evol Microbiol 56, 2031-2036.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2031-2036
    • Kim, K.-H.1    Ten, L.N.2    Liu, Q.-M.3    Im, W.-T.4    Lee, S.-T.5
  • 11
    • 84863230041 scopus 로고    scopus 로고
    • Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
    • Kim, O. S., Cho, Y. J., Lee, K., Yoon, S. H., Kim, M., Na, H., Park, S. C., Jeon, Y. S., Lee, J. H. & other authors (2012). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62, 716-721.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 716-721
    • Kim, O.S.1    Cho, Y.J.2    Lee, K.3    Yoon, S.H.4    Kim, M.5    Na, H.6    Park, S.C.7    Jeon, Y.S.8    Lee, J.H.9
  • 12
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 13
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing, Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In nucleic acid techniques in bacterial systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
    • (1991) In Nucleic Acid Techniques In Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 14
    • 77956816836 scopus 로고
    • Classical and rapid identification methods for medically important bacteria
    • Lanyi, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
    • (1987) Methods Microbiol , vol.19 , pp. 1-67
    • Lanyi, B.1
  • 17
    • 77956996468 scopus 로고
    • Use of ultraviolet absorbancetemperature profile for determining the guanine plus cytosine content of DNA
    • Mandel, M. & Marmur, J. (1968). Use of ultraviolet absorbancetemperature profile for determining the guanine plus cytosine content of DNA. Methods Enzymol 12B, 195-206.
    • (1968) Methods Enzymol , vol.12 B , pp. 195-206
    • Mandel, M.1    Marmur, J.2
  • 20
    • 34848924325 scopus 로고    scopus 로고
    • Sphingobacterium canadense sp. nov., an isolate from corn roots
    • Mehnaz, S., Weselowski, B. & Lazarovits, G. (2007). Sphingobacterium canadense sp. nov., an isolate from corn roots. Syst Appl Microbiol 30, 519-524.
    • (2007) Syst Appl Microbiol , vol.30 , pp. 519-524
    • Mehnaz, S.1    Weselowski, B.2    Lazarovits, G.3
  • 21
    • 0020852868 scopus 로고
    • Agromonas oligotrophica gen. nov., sp. nov., a nitrogen-fixing oligotrophic bacterium
    • Ohta, H. & Hattori, T. (1983). Agromonas oligotrophica gen. nov., sp. nov., a nitrogen-fixing oligotrophic bacterium. Antonie van Leeuwenhoek 49, 429-446.
    • (1983) Antonie Van Leeuwenhoek , vol.49 , pp. 429-446
    • Ohta, H.1    Hattori, T.2
  • 22
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 84860742942 scopus 로고    scopus 로고
    • Sphingobacterium lactis sp. nov. and Sphingobacterium alimentarium sp. nov., isolated from raw milk and a dairy environment
    • Schmidt, V. S. J., Wenning, M. & Scherer, S. (2012). Sphingobacterium lactis sp. nov. and Sphingobacterium alimentarium sp. nov., isolated from raw milk and a dairy environment. Int J Syst Evol Microbiol 62, 1506-1511.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 1506-1511
    • Schmidt, V.S.J.1    Wenning, M.2    Scherer, S.3
  • 27
    • 0031894349 scopus 로고    scopus 로고
    • Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov
    • Steyn, P. L., Segers, P., Vancanneyt, M., Sandra, P., Kersters, K. & Joubert, J. J. (1998). Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov. Int J Syst Bacteriol 48, 165-177.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 165-177
    • Steyn, P.L.1    Segers, P.2    Vancanneyt, M.3    Sandra, P.4    Kersters, K.5    Joubert, J.J.6
  • 28
    • 0028013529 scopus 로고
    • Phylogeny of spore-forming lactic acid bacteria based on 16S rRNA gene sequences
    • Suzuki, T. & Yamasato, K. (1994). Phylogeny of spore-forming lactic acid bacteria based on 16S rRNA gene sequences. FEMS Microbiol Lett 115, 13-17.
    • (1994) FEMS Microbiol Lett , vol.115 , pp. 13-17
    • Suzuki, T.1    Yamasato, K.2
  • 29
    • 0027087159 scopus 로고
    • Proposals of Sphingobacterium faecium sp. nov., Sphingobacterium piscium sp. nov., Sphingobacterium heparinum comb. nov., Sphingobacterium thalpophilum comb. nov., and two genospecies of the genus Sphingobacterium and synonymy of Flavobacterium yabuuchiae and Sphingobacterium spiritivorum
    • Takeuchi, M. & Yokota, A. (1992). Proposals of Sphingobacterium faecium sp. nov., Sphingobacterium piscium sp. nov., Sphingobacterium heparinum comb. nov., Sphingobacterium thalpophilum comb. nov., and two genospecies of the genus Sphingobacterium and synonymy of Flavobacterium yabuuchiae and Sphingobacterium spiritivorum. J Gen Appl Microbiol 38, 465-482.
    • (1992) J Gen Appl Microbiol , vol.38 , pp. 465-482
    • Takeuchi, M.1    Yokota, A.2
  • 30
    • 0020638681 scopus 로고
    • Analysis of bacterial menaquinone mixtures by high-performance liquid chromatography
    • Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high-performance liquid chromatography. J Appl Bacteriol 54, 31-36.
    • (1983) J Appl Bacteriol , vol.54 , pp. 31-36
    • Tamaoka, J.1    Katayama-Fujimura, Y.2    Kuraishi, H.3
  • 31
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 32
    • 33845590365 scopus 로고    scopus 로고
    • Sphingobacterium composti sp. nov., a novel DNase-producing bacterium isolated from compost
    • Ten, L. N., Liu, Q. M., Im, W. T., Aslam, Z. & Lee, S. T. (2006). Sphingobacterium composti sp. nov., a novel DNase-producing bacterium isolated from compost. J Microbiol Biotechnol 16, 1728-1733.
    • (2006) J Microbiol Biotechnol , vol.16 , pp. 1728-1733
    • Ten, L.N.1    Liu, Q.M.2    Im, W.T.3    Aslam, Z.4    Lee, S.T.5
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 53749107418 scopus 로고    scopus 로고
    • Sphingobacterium anhuiense sp. nov., isolated from forest soil
    • Wei, W., Zhou, Y., Wang, X., Huang, X. & Lai, R. (2008). Sphingobacterium anhuiense sp. nov., isolated from forest soil. Int J Syst Evol Microbiol 58, 2098-2101.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2098-2101
    • Wei, W.1    Zhou, Y.2    Wang, X.3    Huang, X.4    Lai, R.5
  • 36
    • 0000508875 scopus 로고
    • Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb. nov., Sphingobacterium multivorum comb. nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: Glucosenonfermenting Gram-negative rods in CDC groups IIK-2 and IIb
    • Yabuuchi, E., Kaneko, T., Yano, I., Moss, C. W. & Miyoshi, N. (1983). Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb. nov., Sphingobacterium multivorum comb. nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: glucosenonfermenting Gram-negative rods in CDC groups IIK-2 and IIb. Int J Syst Bacteriol 33, 580-598.
    • (1983) Int J Syst Bacteriol , vol.33 , pp. 580-598
    • Yabuuchi, E.1    Kaneko, T.2    Yano, I.3    Moss, C.W.4    Miyoshi, N.5
  • 38
    • 84863296769 scopus 로고    scopus 로고
    • Sphingobacterium wenxiniae sp. nov., a cypermethrindegrading species from activated sludge
    • Zhang, J., Zheng, J.-W., Cho, B. C., Hwang, C. Y., Fang, C., He, J. & Li, S.-P. (2012). Sphingobacterium wenxiniae sp. nov., a cypermethrindegrading species from activated sludge. Int J Syst Evol Microbiol 62, 683-687.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 683-687
    • Zhang, J.1    Zheng, J.-W.2    Cho, B.C.3    Hwang, C.Y.4    Fang, C.5    He, J.6    Li, S.-P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.