메뉴 건너뛰기




Volumn 967, Issue , 2013, Pages 235-248

Analysis of suppressor of cytokine signalling (SOCS) gene expression by real-time quantitative PCR

Author keywords

Ct value; Macrophages; Reference gene; Relative expression; RT quantitative PCR; SOCS; Standard curve; Suppressor of cytokine signalling

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA; SUPPRESSOR OF CYTOKINE SIGNALING; INTERLEUKIN 4; PRIMER DNA;

EID: 84878756789     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-242-1_17     Document Type: Chapter
Times cited : (3)

References (24)
  • 1
    • 0030792590 scopus 로고    scopus 로고
    • A family of cytokine-inducible inhibitors of signalling
    • Starr R, Willson TA, Viney EM et al (1997) A family of cytokine-inducible inhibitors of signalling. Nature 387:917–921.
    • (1997) Nature , vol.387 , pp. 917-921
    • Starr, R.1    Willson, T.A.2    Viney, E.M.3
  • 2
    • 13144258732 scopus 로고    scopus 로고
    • Twenty proteins containing a C-terminal SOCS box form five structural classes
    • Hilton DJ, Richardson RT, Alexander WS et al (1998) Twenty proteins containing a C-terminal SOCS box form five structural classes. Proc Natl Acad Sci USA 95:114–119.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 114-119
    • Hilton, D.J.1    Richardson, R.T.2    Alexander, W.S.3
  • 3
    • 33744963148 scopus 로고    scopus 로고
    • The comparative roles of suppressor of cytokine signaling-1 and -3 in the inhibition and desensitization of cytokine signaling
    • Wormald S, Zhang JG, Krebs DL et al (2006) The comparative roles of suppressor of cytokine signaling-1 and -3 in the inhibition and desensitization of cytokine signaling. J Biol Chem 281:11135–11143.
    • (2006) J Biol Chem , vol.281 , pp. 11135-11143
    • Wormald, S.1    Zhang, J.G.2    Krebs, D.L.3
  • 4
    • 0030956715 scopus 로고    scopus 로고
    • CIS, a cytokine inducible SH2 protein, is a target of the JAK-STAT5 pathway and modulates STAT5 activation
    • Matsumoto A, Masuhara M, Mitsui K et al (1997) CIS, a cytokine inducible SH2 protein, is a target of the JAK-STAT5 pathway and modulates STAT5 activation. Blood 89:3148–3154.
    • (1997) Blood , vol.89 , pp. 3148-3154
    • Matsumoto, A.1    Masuhara, M.2    Mitsui, K.3
  • 5
    • 20144380439 scopus 로고    scopus 로고
    • SOCS2 negatively regulates growth hormone action in vitro and in vivo
    • Greenhalgh CJ, Rico-Bautista E, Lorentzon M et al (2005) SOCS2 negatively regulates growth hormone action in vitro and in vivo. J Clin Invest 115:397–406.
    • (2005) J Clin Invest , vol.115 , pp. 397-406
    • Greenhalgh, C.J.1    Rico-Bautista, E.2    Lorentzon, M.3
  • 6
    • 20244389693 scopus 로고    scopus 로고
    • The JAK-binding protein JAB inhibits Janus tyrosine kinase activity through binding in the activation loop
    • Yasukawa H, Misawa H, Sakamoto H et al (1999) The JAK-binding protein JAB inhibits Janus tyrosine kinase activity through binding in the activation loop. EMBO J 18: 1309–1320.
    • (1999) EMBO J , vol.18 , pp. 1309-1320
    • Yasukawa, H.1    Misawa, H.2    Sakamoto, H.3
  • 7
    • 0032803530 scopus 로고    scopus 로고
    • Cytokine-inducible SH2 protein-3 (CIS3/ SOCS3) inhibits Janus tyrosine kinase by binding through the N-terminal kinase inhibitory region as well as SH2 domain
    • Sasaki A, Yasukawa H, Suzuki A et al (1999) Cytokine-inducible SH2 protein-3 (CIS3/ SOCS3) inhibits Janus tyrosine kinase by binding through the N-terminal kinase inhibitory region as well as SH2 domain. Genes Cells 4:339–351.
    • (1999) Genes Cells , vol.4 , pp. 339-351
    • Sasaki, A.1    Yasukawa, H.2    Suzuki, A.3
  • 9
    • 13044263097 scopus 로고    scopus 로고
    • The conserved SOCS box motif in suppressors of cytokine signaling binds to elongins B and C and may couple bound proteins to proteasomal degradation
    • Zhang JG, Farley A, Nicholson SE et al (1999) The conserved SOCS box motif in suppressors of cytokine signaling binds to elongins B and C and may couple bound proteins to proteasomal degradation. Proc Natl Acad Sci U S A 96:2071–2076.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 2071-2076
    • Zhang, J.G.1    Farley, A.2    Nicholson, S.E.3
  • 10
    • 0032535364 scopus 로고    scopus 로고
    • The Elongin BC complex interacts with the conserved SOCS-box motif present in members of the SOCS, ras, WD-40 repeat, and ankyrin repeat families
    • Kamura T, Sato S, Haque D et al (1998) The Elongin BC complex interacts with the conserved SOCS-box motif present in members of the SOCS, ras, WD-40 repeat, and ankyrin repeat families. Genes Dev 12:3872–3881.
    • (1998) Genes Dev , vol.12 , pp. 3872-3881
    • Kamura, T.1    Sato, S.2    Haque, D.3
  • 11
    • 61349119266 scopus 로고    scopus 로고
    • The SOCS box encodes a hierarchy of af finities for Cullin5: Implications for ubiquitin ligase formation and cytokine signalling suppression
    • Babon JJ, Sabo JK, Zhang JG et al (2009) The SOCS box encodes a hierarchy of af finities for Cullin5: implications for ubiquitin ligase formation and cytokine signalling suppression. J Mol Biol 387:162–174.
    • (2009) J Mol Biol , vol.387 , pp. 162-174
    • Babon, J.J.1    Sabo, J.K.2    Zhang, J.G.3
  • 12
    • 0037600741 scopus 로고    scopus 로고
    • IL-6 induces an anti-inflammatory response in the absence of SOCS3 in macrophages
    • Yasukawa H, Ohishi M, Mori H et al (2003) IL-6 induces an anti-inflammatory response in the absence of SOCS3 in macrophages. Nat Immunol 4:551–556.
    • (2003) Nat Immunol , vol.4 , pp. 551-556
    • Yasukawa, H.1    Ohishi, M.2    Mori, H.3
  • 13
    • 33846523494 scopus 로고    scopus 로고
    • Suppressor of cytokine signaling-1 is an IL-4-inducible gene in macrophages and feedback inhibits IL-4 signaling
    • Dickensheets H, Vazquez N, Sheikh F et al (2007) Suppressor of cytokine signaling-1 is an IL-4-inducible gene in macrophages and feedback inhibits IL-4 signaling. Genes Immun 8:21–27.
    • (2007) Genes Immun , vol.8 , pp. 21-27
    • Dickensheets, H.1    Vazquez, N.2    Sheikh, F.3
  • 14
    • 0035042611 scopus 로고    scopus 로고
    • SOCS-1, a negative regulator of the JAK/STAT pathway, is silenced by methylation in human hepatocellular carcinoma and shows growth-suppression activity
    • Yoshikawa H, Matsubara K, Qian GS et al (2001) SOCS-1, a negative regulator of the JAK/STAT pathway, is silenced by methylation in human hepatocellular carcinoma and shows growth-suppression activity. Nat Genet 28:29–35.
    • (2001) Nat Genet , vol.28 , pp. 29-35
    • Yoshikawa, H.1    Matsubara, K.2    Qian, G.S.3
  • 15
    • 79955623650 scopus 로고    scopus 로고
    • Suppressors of cytokine signaling (SOCS) proteins and JAK/STAT pathways: Regulation of T-cell inflammation by SOCS1 and SOCS3
    • Tamiya T, Kashiwagi I, Takahashi R et al (2011) Suppressors of cytokine signaling (SOCS) proteins and JAK/STAT pathways: regulation of T-cell inflammation by SOCS1 and SOCS3. Arterioscler Thromb Vasc Biol 31:980–985.
    • (2011) Arterioscler Thromb Vasc Biol , vol.31 , pp. 980-985
    • Tamiya, T.1    Kashiwagi, I.2    Takahashi, R.3
  • 16
    • 79551703144 scopus 로고    scopus 로고
    • Viral exploitation of host SOCS protein functions
    • Akhtar LN, Benveniste EN (2011) Viral exploitation of host SOCS protein functions. J Virol 85:1912–1921.
    • (2011) J Virol , vol.85 , pp. 1912-1921
    • Akhtar, L.N.1    Benveniste, E.N.2
  • 17
    • 0022965004 scopus 로고
    • Speci fic enzymatic ampli fication of DNA in vitro: The polymerase chain reaction
    • Mullis K, Faloona F, Scharf S et al (1986) Speci fic enzymatic ampli fication of DNA in vitro: the polymerase chain reaction. Cold Spring Harb Symp Quant Biol 51(Pt 1):263–273.
    • (1986) Cold Spring Harb Symp Quant Biol , vol.51 , Issue.1 , pp. 263-273
    • Mullis, K.1    Faloona, F.2    Scharf, S.3
  • 18
    • 0022372670 scopus 로고
    • Enzymatic ampli fication of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia
    • Saiki RK, Scharf S, Faloona F et al (1985) Enzymatic ampli fication of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230:1350–1354.
    • (1985) Science , vol.230 , pp. 1350-1354
    • Saiki, R.K.1    Scharf, S.2    Faloona, F.3
  • 19
    • 15744381713 scopus 로고
    • Kinetic PCR analysis: Real-time monitoring of DNA ampli fication reactions
    • Higuchi R, Fockler C, Dollinger G et al (1993) Kinetic PCR analysis: real-time monitoring of DNA ampli fication reactions. Biotechnology (NY) 11:1026–1030.
    • (1993) Biotechnology (NY) , vol.11 , pp. 1026-1030
    • Higuchi, R.1    Fockler, C.2    Dollinger, G.3
  • 20
    • 21344471138 scopus 로고    scopus 로고
    • Real-time RT-PCR normalisation; strategies and considerations
    • Huggett J, Dheda K, Bustin S et al (2005) Real-time RT-PCR normalisation; strategies and considerations. Genes Immun 6:279–284.
    • (2005) Genes Immun , vol.6 , pp. 279-284
    • Huggett, J.1    Dheda, K.2    Bustin, S.3
  • 21
    • 0346728757 scopus 로고    scopus 로고
    • Guideline to reference gene selection for quantitative real-time PCR
    • Radonic A, Thulke S, Mackay IM et al (2004) Guideline to reference gene selection for quantitative real-time PCR. Biochem Biophys Res Commun 313:856–862.
    • (2004) Biochem Biophys Res Commun , vol.313 , pp. 856-862
    • Radonic, A.1    Thulke, S.2    Mackay, I.M.3
  • 22
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • Vandesompele J, De Preter K, Pattyn F et al (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3(7):RESEARCH0034.
    • (2002) Genome Biol , vol.3 , Issue.7
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3
  • 23
    • 63049110718 scopus 로고    scopus 로고
    • Validation of reference genes for normalization of real-time quantitative RT-PCR data in traumatic brain injury
    • Cook NL, Vink R, Donkin JJ et al (2009) Validation of reference genes for normalization of real-time quantitative RT-PCR data in traumatic brain injury. J Neurosci Res 87:34–41.
    • (2009) J Neurosci Res , vol.87 , pp. 34-41
    • Cook, N.L.1    Vink, R.2    Donkin, J.J.3
  • 24
    • 0036278859 scopus 로고    scopus 로고
    • Gene quantification using real-time quantitative PCR: An emerging technology hits the mainstream
    • Ginzinger DG (2002) Gene quantification using real-time quantitative PCR: an emerging technology hits the mainstream. Exp Hematol 30(6):503–512.
    • (2002) Exp Hematol , vol.30 , Issue.6 , pp. 503-512
    • Ginzinger, D.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.