메뉴 건너뛰기




Volumn 41, Issue 10, 2013, Pages 5382-5399

Characterization of genome-reduced fission yeast strains

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; ENHANCED GREEN FLUORESCENT PROTEIN; FUNGAL PROTEIN; HUMAN GROWTH HORMONE; PHEROMONE; TRANSCRIPTOME;

EID: 84878617116     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkt233     Document Type: Article
Times cited : (20)

References (48)
  • 1
  • 2
    • 34247103699 scopus 로고    scopus 로고
    • Minimum genome factory: Innovation in bioprocesses through genome science
    • Fujio, T. (2007) Minimum genome factory: Innovation in bioprocesses through genome science. Biotechnol. Appl. Biochem., 46, 145-146.
    • (2007) Biotechnol. Appl. Biochem. , vol.46 , pp. 145-146
    • Fujio, T.1
  • 5
    • 56049102602 scopus 로고    scopus 로고
    • Superpositioning of deletions promotes growth of Escherichia coli with a reduced genome
    • Mizoguchi, H., Sawano, Y., Kato, J. and Mori, H. (2008) Superpositioning of deletions promotes growth of Escherichia coli with a reduced genome. DNA Res., 15, 277-284.
    • (2008) DNA Res. , vol.15 , pp. 277-284
    • Mizoguchi, H.1    Sawano, Y.2    Kato, J.3    Mori, H.4
  • 6
    • 83255186862 scopus 로고    scopus 로고
    • Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874
    • Manabe, K., Kageyama, Y., Morimoto, T., Ozawa, T., Sawada, K., Endo, K., Tohata, M., Ara, K., Ozaki, K. and Ogasawara, N. (2011) Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874. Appl. Environ. Microbiol., 77, 8370-8381.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 8370-8381
    • Manabe, K.1    Kageyama, Y.2    Morimoto, T.3    Ozawa, T.4    Sawada, K.5    Endo, K.6    Tohata, M.7    Ara, K.8    Ozaki, K.9    Ogasawara, N.10
  • 10
    • 31544450286 scopus 로고    scopus 로고
    • Construction of Escherichia coli K-12 in-frame single-gene knockout mutants: The Keio collection
    • 2006 0008 February 21 doi: 10.1038/msb4100050; epub ahead of print
    • Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., Datsenko, K.A., Tomita, M., Wanner, B.L. and Mori, H. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection. Mol. Syst. Biol., 2, 2006.0008. February 21 (doi: 10.1038/msb4100050; epub ahead of print).
    • (2006) Mol. Syst. Biol. , vol.2
    • Baba, T.1    Ara, T.2    Hasegawa, M.3    Takai, Y.4    Okumura, Y.5    Baba, M.6    Datsenko, K.A.7    Tomita, M.8    Wanner, B.L.9    Mori, H.10
  • 13
    • 53349142137 scopus 로고    scopus 로고
    • The gap-filling sequence on the left arm of chromosome 2 in fission yeast Schizosaccharomyces pombe
    • Sasaki, M., Idiris, A., Tada, A., Kumagai, H., Giga-Hama, Y. and Tohda, H. (2008) The gap-filling sequence on the left arm of chromosome 2 in fission yeast Schizosaccharomyces pombe. Yeast, 25, 673-679.
    • (2008) Yeast , vol.25 , pp. 673-679
    • Sasaki, M.1    Idiris, A.2    Tada, A.3    Kumagai, H.4    Giga-Hama, Y.5    Tohda, H.6
  • 15
    • 0037351682 scopus 로고    scopus 로고
    • Schizosaccharomyces pombe essential genes: A pilot study
    • Decottignies, A., Sanchez-Perez, I. and Nurse, P. (2003) Schizosaccharomyces pombe essential genes: A pilot study. Genome Res., 13, 399-406.
    • (2003) Genome Res. , vol.13 , pp. 399-406
    • Decottignies, A.1    Sanchez-Perez, I.2    Nurse, P.3
  • 16
    • 32544461879 scopus 로고    scopus 로고
    • A simple and effective chromosome modification method for large-scale deletion of genome sequences and identification of essential genes in fission yeast
    • Hirashima, K., Iwaki, T., Takegawa, K., Giga-Hama, Y. and Tohda, H. (2006) A simple and effective chromosome modification method for large-scale deletion of genome sequences and identification of essential genes in fission yeast. Nucleic Acids Res., 34, e11.
    • (2006) Nucleic Acids Res. , vol.34
    • Hirashima, K.1    Iwaki, T.2    Takegawa, K.3    Giga-Hama, Y.4    Tohda, H.5
  • 19
    • 34447269963 scopus 로고    scopus 로고
    • Analysis of nucleotides by pressure-assisted capillary electrophoresis-mass spectrometry using silanol mask technique
    • Soga, T., Ishikawa, T., Igarashi, S., Sugawara, K., Kakazu, Y. and Tomita, M. (2007) Analysis of nucleotides by pressure-assisted capillary electrophoresis-mass spectrometry using silanol mask technique. J. Chromatogr. A, 1159, 125-133.
    • (2007) J. Chromatogr. A , vol.1159 , pp. 125-133
    • Soga, T.1    Ishikawa, T.2    Igarashi, S.3    Sugawara, K.4    Kakazu, Y.5    Tomita, M.6
  • 20
    • 0242569355 scopus 로고    scopus 로고
    • Quantitative metabolome analysis using capillary electrophoresis mass spectrometry
    • Soga, T., Ohashi, Y., Ueno, Y., Naraoka, H., Tomita, M. and Nishioka, T. (2003) Quantitative metabolome analysis using capillary electrophoresis mass spectrometry. J. Proteome Res., 2, 488-494.
    • (2003) J. Proteome Res. , vol.2 , pp. 488-494
    • Soga, T.1    Ohashi, Y.2    Ueno, Y.3    Naraoka, H.4    Tomita, M.5    Nishioka, T.6
  • 22
    • 31544441621 scopus 로고    scopus 로고
    • Evolutionary-conserved telomere-linked helicase genes of fission yeast are repressed by silencing factors, RNAi components and the telomere-binding protein Taz1
    • Hansen, K.R., Ibarra, P.T. and Thon, G. (2006) Evolutionary-conserved telomere-linked helicase genes of fission yeast are repressed by silencing factors, RNAi components and the telomere-binding protein Taz1. Nucleic Acids Res., 34, 78-88.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 78-88
    • Hansen, K.R.1    Ibarra, P.T.2    Thon, G.3
  • 23
    • 0042925627 scopus 로고    scopus 로고
    • Phenotypic characterization of overexpression or deletion of the Escherichia coli crcA, cspE and crcB genes
    • Sand, O., Gingras, M., Beck, N., Hall, C. and Trun, N. (2003) Phenotypic characterization of overexpression or deletion of the Escherichia coli crcA, cspE and crcB genes. Microbiology, 149, 2107-2117.
    • (2003) Microbiology , vol.149 , pp. 2107-2117
    • Sand, O.1    Gingras, M.2    Beck, N.3    Hall, C.4    Trun, N.5
  • 24
    • 0017389881 scopus 로고
    • Control of cell size at division in fission yeast by a growth-modulated size control over nuclear division
    • Fantes, P. and Nurse, P. (1977) Control of cell size at division in fission yeast by a growth-modulated size control over nuclear division. Exp. Cell Res., 107, 377-386.
    • (1977) Exp. Cell Res. , vol.107 , pp. 377-386
    • Fantes, P.1    Nurse, P.2
  • 26
    • 1642370684 scopus 로고    scopus 로고
    • A distinct type of alcohol dehydrogenase, adh4+, complements ethanol fermentation in an adh1-deficient strain of Schizosaccharomyces pombe
    • Sakurai, M., Tohda, H., Kumagai, H. and Giga-Hama, Y. (2004) A distinct type of alcohol dehydrogenase, adh4+, complements ethanol fermentation in an adh1-deficient strain of Schizosaccharomyces pombe. FEMS Yeast Res., 4, 649-654.
    • (2004) FEMS Yeast Res. , vol.4 , pp. 649-654
    • Sakurai, M.1    Tohda, H.2    Kumagai, H.3    Giga-Hama, Y.4
  • 27
    • 42549118675 scopus 로고    scopus 로고
    • The Tsc/Rheb signaling pathway controls basic amino acid uptake via the Cat1 permease in fission yeast
    • Aspuria, P.J. and Tamanoi, F. (2008) The Tsc/Rheb signaling pathway controls basic amino acid uptake via the Cat1 permease in fission yeast. Mol. Genet. Genomics, 279, 441-450.
    • (2008) Mol. Genet. Genomics , vol.279 , pp. 441-450
    • Aspuria, P.J.1    Tamanoi, F.2
  • 28
    • 34147207884 scopus 로고    scopus 로고
    • Loss of the TOR kinase Tor2 mimics nitrogen starvation and activates the sexual development pathway in fission yeast
    • Matsuo, T., Otsubo, Y., Urano, J., Tamanoi, F. and Yamamoto, M. (2007) Loss of the TOR kinase Tor2 mimics nitrogen starvation and activates the sexual development pathway in fission yeast. Mol. Cell. Biol., 27, 3154-3164.
    • (2007) Mol. Cell. Biol. , vol.27 , pp. 3154-3164
    • Matsuo, T.1    Otsubo, Y.2    Urano, J.3    Tamanoi, F.4    Yamamoto, M.5
  • 29
    • 77149141403 scopus 로고    scopus 로고
    • Fission yeast TORC1 regulates phosphorylation of ribosomal S6 proteins in response to nutrients and its activity is inhibited by rapamycin
    • Nakashima, A., Sato, T. and Tamanoi, F. (2010) Fission yeast TORC1 regulates phosphorylation of ribosomal S6 proteins in response to nutrients and its activity is inhibited by rapamycin. J. Cell Sci., 123, 777-786.
    • (2010) J. Cell Sci. , vol.123 , pp. 777-786
    • Nakashima, A.1    Sato, T.2    Tamanoi, F.3
  • 30
    • 34249054108 scopus 로고    scopus 로고
    • Opposite effects of to r1 and tor2 on nitrogen starvation responses in fission yeast
    • Weisman, R., Roitburg, I., Schonbrun, M., Harari, R. and Kupiec, M. (2007) Opposite effects of tor1 and tor2 on nitrogen starvation responses in fission yeast. Genetics, 175, 1153-1162.
    • (2007) Genetics , vol.175 , pp. 1153-1162
    • Weisman, R.1    Roitburg, I.2    Schonbrun, M.3    Harari, R.4    Kupiec, M.5
  • 31
    • 33747335707 scopus 로고    scopus 로고
    • Physiological characterization and fed-batch production of an extracellular maltase of Schizosaccharomyces pombe CBS 356
    • Jansen, M.L., Krook, D.J., De Graaf, K., van Dijken, J.P., Pronk, J.T. and de Winde, J.H. (2006) Physiological characterization and fed-batch production of an extracellular maltase of Schizosaccharomyces pombe CBS 356. FEMS Yeast Res., 6, 888-901.
    • (2006) FEMS Yeast Res. , vol.6 , pp. 888-901
    • Jansen, M.L.1    Krook, D.J.2    De Graaf, K.3    Van Dijken, J.P.4    Pronk, J.T.5    De Winde, J.H.6
  • 32
    • 77953081695 scopus 로고    scopus 로고
    • The gld1+ gene encoding glycerol dehydrogenase is required for glycerol metabolism in Schizosaccharomyces pombe
    • Matsuzawa, T., Ohashi, T., Hosomi, A., Tanaka, N., Tohda, H. and Takegawa, K. (2010) The gld1+ gene encoding glycerol dehydrogenase is required for glycerol metabolism in Schizosaccharomyces pombe. Appl. Microbiol. Biotechnol., 87, 715-727.
    • (2010) Appl. Microbiol. Biotechnol. , vol.87 , pp. 715-727
    • Matsuzawa, T.1    Ohashi, T.2    Hosomi, A.3    Tanaka, N.4    Tohda, H.5    Takegawa, K.6
  • 33
    • 0142153893 scopus 로고    scopus 로고
    • Ammonia assimilation by Saccharomyces cerevisiae
    • Magasanik, B. (2003) Ammonia assimilation by Saccharomyces cerevisiae. Eukaryot. Cell, 2, 827-829.
    • (2003) Eukaryot. Cell , vol.2 , pp. 827-829
    • Magasanik, B.1
  • 34
    • 0028025206 scopus 로고
    • Biochemical and genetical studies of NADP-specific glutamate dehydrogenase in the fission yeast Schizosaccharomyces pombe
    • Perysinakis, A., Kinghorn, J.R. and Drainas, C. (1994) Biochemical and genetical studies of NADP-specific glutamate dehydrogenase in the fission yeast Schizosaccharomyces pombe. Curr. Genet., 26, 315-320.
    • (1994) Curr. Genet. , vol.26 , pp. 315-320
    • Perysinakis, A.1    Kinghorn, J.R.2    Drainas, C.3
  • 35
    • 0029051618 scopus 로고
    • Glutamine synthetase/glutamate synthase ammonium-assimilating pathway in Schizosaccharomyces pombe
    • Perysinakis, A., Kinghorn, J.R. and Drainas, C. (1995) Glutamine synthetase/glutamate synthase ammonium-assimilating pathway in Schizosaccharomyces pombe. Curr. Microbiol., 30, 367-372.
    • (1995) Curr. Microbiol. , vol.30 , pp. 367-372
    • Perysinakis, A.1    Kinghorn, J.R.2    Drainas, C.3
  • 36
    • 74149090384 scopus 로고    scopus 로고
    • Enhanced protein secretion from multiprotease-deficient fission yeast by modification of its vacuolar protein sorting pathway
    • Idiris, A., Tohda, H., Sasaki, M., Okada, K., Kumagai, H., Giga-Hama, Y. and Takegawa, K. (2009) Enhanced protein secretion from multiprotease-deficient fission yeast by modification of its vacuolar protein sorting pathway. Appl. Microbiol. Biotechnol., 85, 667-677.
    • (2009) Appl. Microbiol. Biotechnol. , vol.85 , pp. 667-677
    • Idiris, A.1    Tohda, H.2    Sasaki, M.3    Okada, K.4    Kumagai, H.5    Giga-Hama, Y.6    Takegawa, K.7
  • 37
    • 0344081177 scopus 로고    scopus 로고
    • Minireview: The AMP-activated protein kinase cascade: The key sensor of cellular energy status
    • Hardie, D.G. (2003) Minireview: The AMP-activated protein kinase cascade: The key sensor of cellular energy status. Endocrinology, 144, 5179-5183.
    • (2003) Endocrinology , vol.144 , pp. 5179-5183
    • Hardie, D.G.1
  • 38
    • 65449145956 scopus 로고    scopus 로고
    • Schizosaccharomyces pombe cell division cycle under limited glucose requires Ssp1 kinase, the putative CaMKK, and Sds23, a PP2A-related phosphatase inhibitor
    • Hanyu, Y., Imai, K.K., Kawasaki, Y., Nakamura, T., Nakaseko, Y., Nagao, K., Kokubu, A., Ebe, M., Fujisawa, A., Hayashi, T. et al. (2009) Schizosaccharomyces pombe cell division cycle under limited glucose requires Ssp1 kinase, the putative CaMKK, and Sds23, a PP2A-related phosphatase inhibitor. Genes Cells, 14, 539-554.
    • (2009) Genes Cells , vol.14 , pp. 539-554
    • Hanyu, Y.1    Imai, K.K.2    Kawasaki, Y.3    Nakamura, T.4    Nakaseko, Y.5    Nagao, K.6    Kokubu, A.7    Ebe, M.8    Fujisawa, A.9    Hayashi, T.10
  • 39
    • 84856688493 scopus 로고    scopus 로고
    • Snf1-like protein kinase Ssp2 regulates glucose derepression in Schizosaccharomyces pombe
    • Matsuzawa, T., Fujita, Y., Tohda, H. and Takegawa, K. (2012) Snf1-like protein kinase Ssp2 regulates glucose derepression in Schizosaccharomyces pombe. Eukaryot. Cell, 11, 159-167.
    • (2012) Eukaryot. Cell , vol.11 , pp. 159-167
    • Matsuzawa, T.1    Fujita, Y.2    Tohda, H.3    Takegawa, K.4
  • 40
    • 0345167800 scopus 로고    scopus 로고
    • TSC2 mediates cellular energy response to control cell growth and survival
    • Inoki, K., Zhu, T. and Guan, K.L. (2003) TSC2 mediates cellular energy response to control cell growth and survival. Cell, 115, 577-590.
    • (2003) Cell , vol.115 , pp. 577-590
    • Inoki, K.1    Zhu, T.2    Guan, K.L.3
  • 43
    • 33751523289 scopus 로고    scopus 로고
    • Fission yeast Tor 2 promotes cell growth and represses cell differentiation
    • Alvarez, B. and Moreno, S. (2006) Fission yeast Tor2 promotes cell growth and represses cell differentiation. J. Cell Sci., 119, 4475-4485.
    • (2006) J Cell Sci. , vol.119 , pp. 4475-4485
    • Alvarez, B.1    Moreno, S.2
  • 44
    • 0036021402 scopus 로고    scopus 로고
    • Role of the Tsc1-Tsc2 complex in signaling and transport across the cell membrane in the fission yeast Schizosaccharomyces pombe
    • Matsumoto, S., Bandyopadhyay, A., Kwiatkowski, D.J., Maitra, U. and Matsumoto, T. (2002) Role of the Tsc1-Tsc2 complex in signaling and transport across the cell membrane in the fission yeast Schizosaccharomyces pombe. Genetics, 161, 1053-1063.
    • (2002) Genetics , vol.161 , pp. 1053-1063
    • Matsumoto, S.1    Bandyopadhyay, A.2    Kwiatkowski, D.J.3    Maitra, U.4    Matsumoto, T.5
  • 45
    • 0033375049 scopus 로고    scopus 로고
    • Expression system for foreign genes using the fission yeast Schizosaccharomyces pombe
    • Giga-Hama, Y. and Kumagai, H. (1999) Expression system for foreign genes using the fission yeast Schizosaccharomyces pombe. Biotechnol. Appl. Biochem., 30, 235-244.
    • (1999) Biotechnol. Appl. Biochem. , vol.30 , pp. 235-244
    • Giga-Hama, Y.1    Kumagai, H.2
  • 47
    • 79551717191 scopus 로고    scopus 로고
    • Structural analysis of alpha1, 3-linked galactose-containing oligosaccharides in Schizosaccharomyces pombe mutants harboring single and multiple alpha-galactosyltransferase genes disruptions
    • Ohashi, T., Nakakita, S., Sumiyoshi, W., Yamada, N., Ikeda, Y., Tanaka, N. and Takegawa, K. (2011) Structural analysis of alpha1, 3-linked galactose-containing oligosaccharides in Schizosaccharomyces pombe mutants harboring single and multiple alpha-galactosyltransferase genes disruptions. Glycobiology, 21, 340-351.
    • (2011) Glycobiology , vol.21 , pp. 340-351
    • Ohashi, T.1    Nakakita, S.2    Sumiyoshi, W.3    Yamada, N.4    Ikeda, Y.5    Tanaka, N.6    Takegawa, K.7
  • 48
    • 84869003644 scopus 로고    scopus 로고
    • Identification of novel alpha1, 3-galactosyltransferase and elimination of alpha-galactose-containing glycans by disruption of multiple alpha-galactosyltransferase genes in Schizosaccharomyces pombe
    • Ohashi, T., Fujiyama, K. and Takegawa, K. (2012) Identification of novel alpha1, 3-galactosyltransferase and elimination of alpha-galactose-containing glycans by disruption of multiple alpha-galactosyltransferase genes in Schizosaccharomyces pombe. J. Biol. Chem., 287, 38866-38875.
    • (2012) J. Biol. Chem. , vol.287 , pp. 38866-38875
    • Ohashi, T.1    Fujiyama, K.2    Takegawa, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.